RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 SCN2AQ99250 2005 aa21.53■■□□□ 1.04
PTPN4-207ENST00000460162 FEZF1A0PJY2 475 aa21.52■■□□□ 1.04
PTPN4-207ENST00000460162 ENO2P09104 434 aaPredicted RBP21.52■■□□□ 1.04
PTPN4-207ENST00000460162 NPPBP16860 134 aa21.52■■□□□ 1.04
PTPN4-207ENST00000460162 AGTR2P50052 363 aa21.52■■□□□ 1.04
PTPN4-207ENST00000460162 PER3P56645 1201 aa21.52■■□□□ 1.04
PTPN4-207ENST00000460162 HECTD2Q5U5R9 776 aa21.52■■□□□ 1.04
PTPN4-207ENST00000460162 DUPD1Q68J44 220 aa21.52■■□□□ 1.04
PTPN4-207ENST00000460162 LANCL3Q6ZV70 420 aa21.52■■□□□ 1.04
PTPN4-207ENST00000460162 CPEB2Q7Z5Q1 589 aaKnown RBP21.52■■□□□ 1.04
PTPN4-207ENST00000460162 SLC26A11Q86WA9 606 aa21.52■■□□□ 1.04
PTPN4-207ENST00000460162 MFSD9Q8NBP5 474 aa21.52■■□□□ 1.04
PTPN4-207ENST00000460162 KCT2Q8NC54 265 aa21.52■■□□□ 1.04
PTPN4-207ENST00000460162 ABHD11Q8NFV4 315 aa21.52■■□□□ 1.04
PTPN4-207ENST00000460162 OR56A3Q8NH54 315 aa21.52■■□□□ 1.04
PTPN4-207ENST00000460162 SLC13A3Q8WWT9 602 aa21.52■■□□□ 1.04
PTPN4-207ENST00000460162 ATL1Q8WXF7 558 aa21.52■■□□□ 1.04
PTPN4-207ENST00000460162 MAGEB10Q96LZ2 347 aaPredicted RBP21.52■■□□□ 1.04
PTPN4-207ENST00000460162 MACROD1Q9BQ69 325 aa21.52■■□□□ 1.04
PTPN4-207ENST00000460162 TRIM54Q9BYV2 358 aa21.52■■□□□ 1.04
PTPN4-207ENST00000460162 TRMT1Q9NXH9 659 aaKnown RBP21.52■■□□□ 1.04
PTPN4-207ENST00000460162 PLA2G3Q9NZ20 509 aa21.52■■□□□ 1.04
PTPN4-207ENST00000460162 TEKT2Q9UIF3 430 aa21.52■■□□□ 1.04
PTPN4-207ENST00000460162 CHMP2BQ9UQN3 213 aa21.52■■□□□ 1.04
PTPN4-207ENST00000460162 SGK494L7N484 410 aa21.51■■□□□ 1.03
PTPN4-207ENST00000460162 SEC24DO94855 1032 aaPredicted RBP21.51■■□□□ 1.03
PTPN4-207ENST00000460162 ELK3P41970 407 aa21.51■■□□□ 1.03
PTPN4-207ENST00000460162 CCR8P51685 355 aa21.51■■□□□ 1.03
PTPN4-207ENST00000460162 ABHD17BQ5VST6 288 aa21.51■■□□□ 1.03
PTPN4-207ENST00000460162 STEAP4Q687X5 459 aa21.51■■□□□ 1.03
PTPN4-207ENST00000460162 ZNF324BQ6AW86 544 aaPredicted RBP21.51■■□□□ 1.03
PTPN4-207ENST00000460162 PLAG1Q6DJT9 500 aa21.51■■□□□ 1.03
PTPN4-207ENST00000460162 CFAP36Q96G28 342 aa21.51■■□□□ 1.03
PTPN4-207ENST00000460162 CYTH2Q99418 400 aa21.51■■□□□ 1.03
PTPN4-207ENST00000460162 WDR83Q9BRX9 315 aaKnown RBP21.51■■□□□ 1.03
PTPN4-207ENST00000460162 KCNF1Q9H3M0 494 aa21.51■■□□□ 1.03
PTPN4-207ENST00000460162 OSGIN2Q9Y236 505 aa21.51■■□□□ 1.03
PTPN4-207ENST00000460162 CENPEQ02224 2701 aa21.51■■□□□ 1.03
PTPN4-207ENST00000460162 SCN3AQ9NY46 2000 aa21.51■■□□□ 1.03
PTPN4-207ENST00000460162 DIDO1Q9BTC0 2240 aaKnown RBP21.5■■□□□ 1.03
PTPN4-207ENST00000460162 OR5H15A6NDH6 313 aa21.5■■□□□ 1.03
PTPN4-207ENST00000460162 LCMT2O60294 686 aaKnown RBP21.5■■□□□ 1.03
PTPN4-207ENST00000460162 RDH16O75452 317 aa21.5■■□□□ 1.03
PTPN4-207ENST00000460162 WDPCPO95876 746 aa21.5■■□□□ 1.03
PTPN4-207ENST00000460162 IL10P22301 178 aa21.5■■□□□ 1.03
PTPN4-207ENST00000460162 TDGF1P3P51864 188 aa21.5■■□□□ 1.03
PTPN4-207ENST00000460162 DR1Q01658 176 aa21.5■■□□□ 1.03
PTPN4-207ENST00000460162 FRG1Q14331 258 aaKnown RBP21.5■■□□□ 1.03
PTPN4-207ENST00000460162 HERC3Q15034 1050 aa21.5■■□□□ 1.03
PTPN4-207ENST00000460162 ZXDCQ2QGD7 858 aaPredicted RBP21.5■■□□□ 1.03
PTPN4-207ENST00000460162 TRMT10BQ6PF06 316 aaKnown RBP21.5■■□□□ 1.03
PTPN4-207ENST00000460162 PDSS2Q86YH6 399 aa21.5■■□□□ 1.03
PTPN4-207ENST00000460162 TBC1D19Q8N5T2 526 aa21.5■■□□□ 1.03
PTPN4-207ENST00000460162 OR4K1Q8NGD4 311 aa21.5■■□□□ 1.03
PTPN4-207ENST00000460162 NR4A3Q92570 626 aa21.5■■□□□ 1.03
PTPN4-207ENST00000460162 PYCR2Q96C36 320 aa21.5■■□□□ 1.03
PTPN4-207ENST00000460162 FBXL8Q96CD0 374 aa21.5■■□□□ 1.03
PTPN4-207ENST00000460162 OR1F2PQ96R84 312 aa21.5■■□□□ 1.03
PTPN4-207ENST00000460162 OLFM1Q99784 485 aa21.5■■□□□ 1.03
PTPN4-207ENST00000460162 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.5■■□□□ 1.03
PTPN4-207ENST00000460162 GRPEL1Q9HAV7 217 aa21.5■■□□□ 1.03
PTPN4-207ENST00000460162 NAALAD2Q9Y3Q0 740 aa21.5■■□□□ 1.03
PTPN4-207ENST00000460162 TEX264Q9Y6I9 313 aa21.5■■□□□ 1.03
PTPN4-207ENST00000460162 TRBC2A0A5B9 178 aa21.49■■□□□ 1.03
PTPN4-207ENST00000460162 NDUFS4O43181 175 aa21.49■■□□□ 1.03
PTPN4-207ENST00000460162 SKP1P63208 163 aa21.49■■□□□ 1.03
PTPN4-207ENST00000460162 ZNF33BQ06732 778 aa21.49■■□□□ 1.03
PTPN4-207ENST00000460162 PWP1Q13610 501 aa21.49■■□□□ 1.03
PTPN4-207ENST00000460162 BTBD16Q32M84 506 aa21.49■■□□□ 1.03
PTPN4-207ENST00000460162 NIPAL1Q6NVV3 410 aa21.49■■□□□ 1.03
PTPN4-207ENST00000460162 STRA8Q7Z7C7 330 aa21.49■■□□□ 1.03
PTPN4-207ENST00000460162 AFAP1L2Q8N4X5 818 aa21.49■■□□□ 1.03
PTPN4-207ENST00000460162 SUN3Q8TAQ9 357 aa21.49■■□□□ 1.03
PTPN4-207ENST00000460162 SNF8Q96H20 258 aa21.49■■□□□ 1.03
PTPN4-207ENST00000460162 PDLIM5Q96HC4 596 aaKnown RBP21.49■■□□□ 1.03
PTPN4-207ENST00000460162 OR4K3Q96R72 315 aa21.49■■□□□ 1.03
PTPN4-207ENST00000460162 TAAR6Q96RI8 345 aa21.49■■□□□ 1.03
PTPN4-207ENST00000460162 VWA7Q9Y334 891 aa21.49■■□□□ 1.03
PTPN4-207ENST00000460162 CROCCQ5TZA2 2017 aa21.49■■□□□ 1.03
PTPN4-207ENST00000460162 IGHV3-20A0A0C4DH32 117 aa21.48■■□□□ 1.03
PTPN4-207ENST00000460162 LRRTM2O43300 516 aa21.48■■□□□ 1.03
PTPN4-207ENST00000460162 F10P00742 488 aa21.48■■□□□ 1.03
PTPN4-207ENST00000460162 STSP08842 583 aa21.48■■□□□ 1.03
PTPN4-207ENST00000460162 MYBL2P10244 700 aa21.48■■□□□ 1.03
PTPN4-207ENST00000460162 ZNF37AP17032 561 aaPredicted RBP21.48■■□□□ 1.03
PTPN4-207ENST00000460162 ARL4CP56559 192 aa21.48■■□□□ 1.03
PTPN4-207ENST00000460162 EXT1Q16394 746 aa21.48■■□□□ 1.03
PTPN4-207ENST00000460162 SBSNQ6UWP8 590 aa21.48■■□□□ 1.03
PTPN4-207ENST00000460162 ANKRD37Q7Z713 158 aa21.48■■□□□ 1.03
PTPN4-207ENST00000460162 KLHL7Q8IXQ5 586 aa21.48■■□□□ 1.03
PTPN4-207ENST00000460162 CAPZA3Q96KX2 299 aa21.48■■□□□ 1.03
PTPN4-207ENST00000460162 ZFATQ9P243 1243 aa21.48■■□□□ 1.03
PTPN4-207ENST00000460162 OR1F1O43749 312 aa21.47■■□□□ 1.03
PTPN4-207ENST00000460162 PRAMEF2O60811 474 aa21.47■■□□□ 1.03
PTPN4-207ENST00000460162 SEC31AO94979 1220 aaKnown RBP21.47■■□□□ 1.03
PTPN4-207ENST00000460162 MEF2AQ02078 507 aaPredicted RBP21.47■■□□□ 1.03
PTPN4-207ENST00000460162 PPP1R3AQ16821 1122 aa21.47■■□□□ 1.03
PTPN4-207ENST00000460162 HP1BP3Q5SSJ5 553 aaPredicted RBP21.47■■□□□ 1.03
PTPN4-207ENST00000460162 SHISA5Q8N114 240 aa21.47■■□□□ 1.03
PTPN4-207ENST00000460162 ZNF740Q8NDX6 193 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms