RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 POLHQ9Y253 713 aa14.92□□□□□ -0.02
SDF4-204ENST00000459994 HEATR5BQ9P2D3 2071 aa14.92□□□□□ -0.02
SDF4-204ENST00000459994 K7EPI3 171 aa14.91□□□□□ -0.02
SDF4-204ENST00000459994 MEN1O00255 615 aa14.91□□□□□ -0.02
SDF4-204ENST00000459994 PRICKLE3O43900 615 aaPredicted RBP14.91□□□□□ -0.02
SDF4-204ENST00000459994 H2AFYO75367 372 aaKnown RBP14.91□□□□□ -0.02
SDF4-204ENST00000459994 RPS17P08708 135 aaKnown RBP14.91□□□□□ -0.02
SDF4-204ENST00000459994 EEF1DP29692 281 aaKnown RBP14.91□□□□□ -0.02
SDF4-204ENST00000459994 HSPA7P48741 367 aa14.91□□□□□ -0.02
SDF4-204ENST00000459994 FASTKQ14296 549 aaKnown RBP14.91□□□□□ -0.02
SDF4-204ENST00000459994 C18orf21Q32NC0 220 aaPredicted RBP14.91□□□□□ -0.02
SDF4-204ENST00000459994 UNC50Q53HI1 259 aa14.91□□□□□ -0.02
SDF4-204ENST00000459994 ZNF678Q5SXM1 525 aa14.91□□□□□ -0.02
SDF4-204ENST00000459994 TAX1BP1Q86VP1 789 aa14.91□□□□□ -0.02
SDF4-204ENST00000459994 TRIM42Q8IWZ5 723 aa14.91□□□□□ -0.02
SDF4-204ENST00000459994 ENDOVQ8N8Q3 282 aaKnown RBP14.91□□□□□ -0.02
SDF4-204ENST00000459994 OR8K5Q8NH50 307 aa14.91□□□□□ -0.02
SDF4-204ENST00000459994 ADAMTS17Q8TE56 1095 aa14.91□□□□□ -0.02
SDF4-204ENST00000459994 CLIP3Q96DZ5 547 aa14.91□□□□□ -0.02
SDF4-204ENST00000459994 TMEM237Q96Q45 408 aa14.91□□□□□ -0.02
SDF4-204ENST00000459994 MECRQ9BV79 373 aa14.91□□□□□ -0.02
SDF4-204ENST00000459994 SPRTNQ9H040 489 aaPredicted RBP14.91□□□□□ -0.02
SDF4-204ENST00000459994 ACTR5Q9H9F9 607 aaPredicted RBP14.91□□□□□ -0.02
SDF4-204ENST00000459994 CCDC177Q9NQR7 707 aaPredicted RBP14.91□□□□□ -0.02
SDF4-204ENST00000459994 FARSAQ9Y285 508 aaKnown RBP14.91□□□□□ -0.02
SDF4-204ENST00000459994 MAN2B2Q9Y2E5 1009 aa14.91□□□□□ -0.02
SDF4-204ENST00000459994 RELNP78509 3460 aa14.91□□□□□ -0.02
SDF4-204ENST00000459994 A0A1W2PPV9 198 aa14.9□□□□□ -0.02
SDF4-204ENST00000459994 ZNF749O43361 778 aa14.9□□□□□ -0.02
SDF4-204ENST00000459994 SIX3O95343 332 aaPredicted RBP14.9□□□□□ -0.02
SDF4-204ENST00000459994 GDF5P43026 501 aa14.9□□□□□ -0.02
SDF4-204ENST00000459994 PIK3CGP48736 1102 aa14.9□□□□□ -0.02
SDF4-204ENST00000459994 NAGLUP54802 743 aa14.9□□□□□ -0.02
SDF4-204ENST00000459994 TBPL1P62380 186 aa14.9□□□□□ -0.02
SDF4-204ENST00000459994 KIR2DS3Q14952 304 aa14.9□□□□□ -0.02
SDF4-204ENST00000459994 UGT8Q16880 541 aa14.9□□□□□ -0.02
SDF4-204ENST00000459994 LACTB2Q53H82 288 aaPredicted RBP14.9□□□□□ -0.02
SDF4-204ENST00000459994 THOC6Q86W42 341 aaKnown RBP14.9□□□□□ -0.02
SDF4-204ENST00000459994 PPFIBP2Q8ND30 876 aa14.9□□□□□ -0.02
SDF4-204ENST00000459994 RAB3IL1Q8TBN0 382 aa14.9□□□□□ -0.02
SDF4-204ENST00000459994 ZNF483Q8TF39 744 aaPredicted RBP14.9□□□□□ -0.02
SDF4-204ENST00000459994 ESAMQ96AP7 390 aa14.9□□□□□ -0.02
SDF4-204ENST00000459994 SLC22A18Q96BI1 424 aa14.9□□□□□ -0.02
SDF4-204ENST00000459994 LRFN5Q96NI6 719 aa14.9□□□□□ -0.02
SDF4-204ENST00000459994 MIPEPQ99797 713 aa14.9□□□□□ -0.02
SDF4-204ENST00000459994 HAUS8Q9BT25 410 aa14.9□□□□□ -0.02
SDF4-204ENST00000459994 GATA5Q9BWX5 397 aaPredicted RBP14.9□□□□□ -0.02
SDF4-204ENST00000459994 FANCEQ9HB96 536 aa14.9□□□□□ -0.02
SDF4-204ENST00000459994 DNAJC11Q9NVH1 559 aa14.9□□□□□ -0.02
SDF4-204ENST00000459994 INTS7Q9NVH2 962 aaKnown RBP14.9□□□□□ -0.02
SDF4-204ENST00000459994 OPTCQ9UBM4 332 aa14.9□□□□□ -0.02
SDF4-204ENST00000459994 PCTPQ9UKL6 214 aa14.9□□□□□ -0.02
SDF4-204ENST00000459994 ASB1Q9Y576 335 aa14.9□□□□□ -0.02
SDF4-204ENST00000459994 SPTA1P02549 2419 aa14.9□□□□□ -0.02
SDF4-204ENST00000459994 A0A0J9YY10 115 aa14.89□□□□□ -0.03
SDF4-204ENST00000459994 WDR91A4D1P6 747 aa14.89□□□□□ -0.03
SDF4-204ENST00000459994 LRRC14BA6NHZ5 514 aa14.89□□□□□ -0.03
SDF4-204ENST00000459994 ISM1B1AKI9 464 aa14.89□□□□□ -0.03
SDF4-204ENST00000459994 E2F3O00716 465 aa14.89□□□□□ -0.03
SDF4-204ENST00000459994 CCNT2O60583 730 aaKnown RBP14.89□□□□□ -0.03
SDF4-204ENST00000459994 WDR47O94967 919 aa14.89□□□□□ -0.03
SDF4-204ENST00000459994 FKBP9O95302 570 aa14.89□□□□□ -0.03
SDF4-204ENST00000459994 SERPINE1P05121 402 aa14.89□□□□□ -0.03
SDF4-204ENST00000459994 MSL3P1P0C860 447 aa14.89□□□□□ -0.03
SDF4-204ENST00000459994 NPPBP16860 134 aa14.89□□□□□ -0.03
SDF4-204ENST00000459994 GRK2P25098 689 aa14.89□□□□□ -0.03
SDF4-204ENST00000459994 SERPINB5P36952 375 aa14.89□□□□□ -0.03
SDF4-204ENST00000459994 ITGA1P56199 1179 aa14.89□□□□□ -0.03
SDF4-204ENST00000459994 PCDH1Q08174 1060 aa14.89□□□□□ -0.03
SDF4-204ENST00000459994 IGFBP7Q16270 282 aa14.89□□□□□ -0.03
SDF4-204ENST00000459994 PDK4Q16654 411 aa14.89□□□□□ -0.03
SDF4-204ENST00000459994 FBXO48Q5FWF7 155 aa14.89□□□□□ -0.03
SDF4-204ENST00000459994 C1orf189Q5VU69 101 aa14.89□□□□□ -0.03
SDF4-204ENST00000459994 LCTLQ6UWM7 567 aa14.89□□□□□ -0.03
SDF4-204ENST00000459994 SYVN1Q86TM6 617 aa14.89□□□□□ -0.03
SDF4-204ENST00000459994 PYCR2Q96C36 320 aa14.89□□□□□ -0.03
SDF4-204ENST00000459994 OR4K3Q96R72 315 aa14.89□□□□□ -0.03
SDF4-204ENST00000459994 TRMOQ9BU70 441 aa14.89□□□□□ -0.03
SDF4-204ENST00000459994 CAPS2Q9BXY5 557 aa14.89□□□□□ -0.03
SDF4-204ENST00000459994 GPR87Q9BY21 358 aa14.89□□□□□ -0.03
SDF4-204ENST00000459994 CLMPQ9H6B4 373 aa14.89□□□□□ -0.03
SDF4-204ENST00000459994 GPRC5BQ9NZH0 403 aa14.89□□□□□ -0.03
SDF4-204ENST00000459994 SLC22A14Q9Y267 594 aa14.89□□□□□ -0.03
SDF4-204ENST00000459994 DOCK10Q96BY6 2186 aa14.88□□□□□ -0.03
SDF4-204ENST00000459994 SETXQ7Z333 2677 aaKnown RBP14.88□□□□□ -0.03
SDF4-204ENST00000459994 ARGFXA6NJG6 315 aa14.88□□□□□ -0.03
SDF4-204ENST00000459994 CYSRT1A8MQ03 144 aa14.88□□□□□ -0.03
SDF4-204ENST00000459994 E7EQ34 232 aa14.88□□□□□ -0.03
SDF4-204ENST00000459994 KLF11O14901 512 aa14.88□□□□□ -0.03
SDF4-204ENST00000459994 NRP2O60462 931 aa14.88□□□□□ -0.03
SDF4-204ENST00000459994 NPHS1O60500 1241 aa14.88□□□□□ -0.03
SDF4-204ENST00000459994 CNOT3O75175 753 aaKnown RBP14.88□□□□□ -0.03
SDF4-204ENST00000459994 SUPT7LO94864 414 aa14.88□□□□□ -0.03
SDF4-204ENST00000459994 RECKO95980 971 aa14.88□□□□□ -0.03
SDF4-204ENST00000459994 NEFHP12036 1026 aa14.88□□□□□ -0.03
SDF4-204ENST00000459994 EPB42P16452 691 aa14.88□□□□□ -0.03
SDF4-204ENST00000459994 MAGP20916 626 aa14.88□□□□□ -0.03
SDF4-204ENST00000459994 BGNP21810 368 aa14.88□□□□□ -0.03
SDF4-204ENST00000459994 PSMB5P28074 263 aa14.88□□□□□ -0.03
SDF4-204ENST00000459994 RPS15P62841 145 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms