RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 APIPQ96GX9 242 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 BOCQ9BWV1 1114 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 TAPBPLQ9BX59 468 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 EBPLQ9BY08 206 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 RNF121Q9H920 327 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 HHATLQ9HCP6 504 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 ABCB9Q9NP78 766 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 IMPAD1Q9NX62 359 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 ASIC5Q9NY37 505 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 KCNN3Q9UGI6 736 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 CLEC2DQ9UHP7 191 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 TEKT2Q9UIF3 430 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 DUSP12Q9UNI6 340 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 PCDHGB3Q9Y5G1 929 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 DOCK4Q8N1I0 1966 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 SMIM30A4D0T7 59 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 CA12O43570 354 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 CPSF4O95639 269 aaKnown RBP9.95□□□□□ -0.82
CLIP4-208ENST00000456385 POMCP01189 267 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 CYP17A1P05093 508 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 ALPPP05187 535 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 ODC1P11926 461 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 ERP29P30040 261 aaKnown RBP9.95□□□□□ -0.82
CLIP4-208ENST00000456385 RORCP51449 518 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 CLCN4P51793 760 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 CASP9P55211 416 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 CSTF3Q12996 717 aaKnown RBP9.95□□□□□ -0.82
CLIP4-208ENST00000456385 ASAH1Q13510 395 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 EIF4HQ15056 248 aaKnown RBP9.95□□□□□ -0.82
CLIP4-208ENST00000456385 BTBD16Q32M84 506 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 TIMM50Q3ZCQ8 353 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 AMIGO1Q86WK6 493 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 OR7D4Q8NG98 312 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 SPPL2AQ8TCT8 520 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 REPS1Q96D71 796 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 APOLD1Q96LR9 279 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 HDHD5Q9BXW7 423 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 P2RY12Q9H244 342 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 RERGLQ9H628 205 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 PDFQ9HBH1 243 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 NDUFAF4Q9P032 175 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 VPS9D1Q9Y2B5 631 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 TRAV19A0A0A6YYK7 116 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 LEUTXA8MZ59 168 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 YY2O15391 372 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 STX7O15400 261 aaKnown RBP9.95□□□□□ -0.82
CLIP4-208ENST00000456385 PLA2G10O15496 165 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 NOS1APO75052 506 aaPredicted RBP9.95□□□□□ -0.82
CLIP4-208ENST00000456385 POU3F3P20264 500 aaPredicted RBP9.95□□□□□ -0.82
CLIP4-208ENST00000456385 CD9P21926 228 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 WEE1P30291 646 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 PTGER3P43115 390 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 KIR3DL1P43629 444 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 GZMKP49863 264 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 TARDBPQ13148 414 aaKnown RBP eCLIP9.95□□□□□ -0.82
CLIP4-208ENST00000456385 TATDN3Q17R31 274 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.95□□□□□ -0.82
CLIP4-208ENST00000456385 GLYR1Q49A26 553 aaPredicted RBP9.95□□□□□ -0.82
CLIP4-208ENST00000456385 DUSP28Q4G0W2 176 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 SLC35F1Q5T1Q4 408 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 SAXO2Q658L1 398 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 SPATA2LQ8IUW3 424 aaPredicted RBP9.95□□□□□ -0.82
CLIP4-208ENST00000456385 PGBD3Q8N328 593 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 CARNMT1Q8N4J0 409 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 DENND6BQ8NEG7 585 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 SELENOMQ8WWX9 145 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 GTPBP3Q969Y2 492 aaKnown RBP9.95□□□□□ -0.82
CLIP4-208ENST00000456385 CCDC120Q96HB5 630 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 TTLL2Q9BWV7 592 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 CDCA4Q9BXL8 241 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 MIXL1Q9H2W2 232 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 COQ3Q9NZJ6 369 aa9.95□□□□□ -0.82
CLIP4-208ENST00000456385 MAGEB17A8MXT2 336 aa9.94□□□□□ -0.82
CLIP4-208ENST00000456385 SUV39H1O43463 412 aa9.94□□□□□ -0.82
CLIP4-208ENST00000456385 OR2B3O76000 313 aa9.94□□□□□ -0.82
CLIP4-208ENST00000456385 WDR47O94967 919 aa9.94□□□□□ -0.82
CLIP4-208ENST00000456385 EPN2O95208 641 aa9.94□□□□□ -0.82
CLIP4-208ENST00000456385 PRAMEF12O95522 483 aa9.94□□□□□ -0.82
CLIP4-208ENST00000456385 MYCP01106 439 aaPredicted RBP9.94□□□□□ -0.82
CLIP4-208ENST00000456385 EBLN1P0CF75 366 aa9.94□□□□□ -0.82
CLIP4-208ENST00000456385 ACPPP15309 386 aa9.94□□□□□ -0.82
CLIP4-208ENST00000456385 EPB42P16452 691 aa9.94□□□□□ -0.82
CLIP4-208ENST00000456385 GPX2P18283 190 aa9.94□□□□□ -0.82
CLIP4-208ENST00000456385 EPORP19235 508 aa9.94□□□□□ -0.82
CLIP4-208ENST00000456385 GPC1P35052 558 aa9.94□□□□□ -0.82
CLIP4-208ENST00000456385 CRYBB2P43320 205 aa9.94□□□□□ -0.82
CLIP4-208ENST00000456385 CDH12P55289 794 aa9.94□□□□□ -0.82
CLIP4-208ENST00000456385 ARHGEF7Q14155 803 aa9.94□□□□□ -0.82
CLIP4-208ENST00000456385 SF1Q15637 639 aaKnown RBP9.94□□□□□ -0.82
CLIP4-208ENST00000456385 DUOXA1Q1HG43 343 aa9.94□□□□□ -0.82
CLIP4-208ENST00000456385 PTRHD1Q6GMV3 140 aaKnown RBP9.94□□□□□ -0.82
CLIP4-208ENST00000456385 LAMTOR1Q6IAA8 161 aa9.94□□□□□ -0.82
CLIP4-208ENST00000456385 METTL23Q86XA0 190 aa9.94□□□□□ -0.82
CLIP4-208ENST00000456385 TCTE3Q8IZS6 198 aa9.94□□□□□ -0.82
CLIP4-208ENST00000456385 CDC26Q8NHZ8 85 aa9.94□□□□□ -0.82
CLIP4-208ENST00000456385 TTC9Q92623 222 aa9.94□□□□□ -0.82
CLIP4-208ENST00000456385 NELL1Q92832 810 aa9.94□□□□□ -0.82
CLIP4-208ENST00000456385 TESCQ96BS2 214 aa9.94□□□□□ -0.82
CLIP4-208ENST00000456385 MGME1Q9BQP7 344 aa9.94□□□□□ -0.82
CLIP4-208ENST00000456385 SPON2Q9BUD6 331 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms