RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 PRKCDQ05655 676 aa17.07■□□□□ 0.32
PTPN6-204ENST00000456013 TEAD4Q15561 434 aa17.07■□□□□ 0.32
PTPN6-204ENST00000456013 HKDC1Q2TB90 917 aa17.07■□□□□ 0.32
PTPN6-204ENST00000456013 FBXO43Q4G163 708 aa17.07■□□□□ 0.32
PTPN6-204ENST00000456013 TPRG1LQ5T0D9 272 aa17.07■□□□□ 0.32
PTPN6-204ENST00000456013 USP45Q70EL2 814 aa17.07■□□□□ 0.32
PTPN6-204ENST00000456013 TMEM150AQ86TG1 271 aa17.07■□□□□ 0.32
PTPN6-204ENST00000456013 KBTBD8Q8NFY9 601 aa17.07■□□□□ 0.32
PTPN6-204ENST00000456013 CDADC1Q9BWV3 514 aa17.07■□□□□ 0.32
PTPN6-204ENST00000456013 BBS2Q9BXC9 721 aa17.07■□□□□ 0.32
PTPN6-204ENST00000456013 TSC22D4Q9Y3Q8 395 aa17.07■□□□□ 0.32
PTPN6-204ENST00000456013 ZNF451Q9Y4E5 1061 aa17.07■□□□□ 0.32
PTPN6-204ENST00000456013 KIAA1671Q9BY89 1806 aa17.07■□□□□ 0.32
PTPN6-204ENST00000456013 ALPK3Q96L96 1907 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 TMEM88BA6NKF7 163 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 GABRR3A8MPY1 467 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 HOXA2O43364 376 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 GCM2O75603 506 aaPredicted RBP17.06■□□□□ 0.32
PTPN6-204ENST00000456013 ELNP15502 786 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 SELPP16109 830 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 LHCGRP22888 699 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 GRK5P34947 590 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 PPIGQ13427 754 aaKnown RBP eCLIP17.06■□□□□ 0.324e-9■■■■■ 35.5
PTPN6-204ENST00000456013 GPNMBQ14956 572 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 CPTPQ5TA50 214 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 CAMKMTQ7Z624 323 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 VPS37AQ8NEZ2 397 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 MAL2Q969L2 176 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 ECHDC3Q96DC8 303 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 COL21A1Q96P44 957 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 MTERF1Q99551 399 aaKnown RBP17.06■□□□□ 0.32
PTPN6-204ENST00000456013 AMBNQ9NP70 447 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 NDUFAF4Q9P032 175 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 TMPRSS11EQ9UL52 423 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 ATP11BQ9Y2G3 1177 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 TESMINQ9Y4I5 508 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 PCDHGA3Q9Y5H0 932 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 PCDHGA2Q9Y5H1 932 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 PTTG1O95997 202 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 ANXA8P13928 327 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 ATP1B2P14415 290 aaPredicted RBP17.06■□□□□ 0.32
PTPN6-204ENST00000456013 AQP1P29972 269 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 ASMTP46597 345 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 LIMK1P53667 647 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 LMAN2Q12907 356 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 KCNC3Q14003 757 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 VEPH1Q14D04 833 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 XKR6Q5GH73 641 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 DEPDC1Q5TB30 811 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 RGMBQ6NW40 437 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 NPAS3Q8IXF0 933 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 CRIPAKQ8N1N5 446 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 SLC5A8Q8N695 610 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 C11orf65Q8NCR3 313 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 OR10G2Q8NGC3 310 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 SPPL2AQ8TCT8 520 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 CORO1BQ9BR76 489 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 MAPRE3Q9UPY8 281 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 POFUT2Q9Y2G5 429 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 OBSL1O75147 1896 aa17.06■□□□□ 0.32
PTPN6-204ENST00000456013 KCNK2O95069 426 aa17.05■□□□□ 0.32
PTPN6-204ENST00000456013 HSD3B1P14060 373 aa17.05■□□□□ 0.32
PTPN6-204ENST00000456013 GABRB1P18505 474 aa17.05■□□□□ 0.32
PTPN6-204ENST00000456013 PTX3P26022 381 aaPredicted RBP17.05■□□□□ 0.32
PTPN6-204ENST00000456013 HSD3B2P26439 372 aa17.05■□□□□ 0.32
PTPN6-204ENST00000456013 S100A5P33763 92 aa17.05■□□□□ 0.32
PTPN6-204ENST00000456013 SEPHS1P49903 392 aa17.05■□□□□ 0.32
PTPN6-204ENST00000456013 DDX39BQ13838 428 aaKnown RBP17.05■□□□□ 0.32
PTPN6-204ENST00000456013 SF1Q15637 639 aaKnown RBP17.05■□□□□ 0.32
PTPN6-204ENST00000456013 ATAD3BQ5T9A4 648 aa17.05■□□□□ 0.32
PTPN6-204ENST00000456013 ANXA8L1Q5VT79 327 aa17.05■□□□□ 0.32
PTPN6-204ENST00000456013 ZDHHC20Q5W0Z9 365 aa17.05■□□□□ 0.32
PTPN6-204ENST00000456013 RASGRP3Q8IV61 690 aa17.05■□□□□ 0.32
PTPN6-204ENST00000456013 NAGSQ8N159 534 aa17.05■□□□□ 0.32
PTPN6-204ENST00000456013 FAM83FQ8NEG4 500 aaPredicted RBP17.05■□□□□ 0.32
PTPN6-204ENST00000456013 DENND6BQ8NEG7 585 aa17.05■□□□□ 0.32
PTPN6-204ENST00000456013 OR4C15Q8NGM1 316 aa17.05■□□□□ 0.32
PTPN6-204ENST00000456013 MCCC1Q96RQ3 725 aaPredicted RBP17.05■□□□□ 0.32
PTPN6-204ENST00000456013 VN1R3Q9BXE9 311 aa17.05■□□□□ 0.32
PTPN6-204ENST00000456013 PRDM8Q9NQV8 689 aa17.05■□□□□ 0.32
PTPN6-204ENST00000456013 RAD18Q9NS91 495 aa17.05■□□□□ 0.32
PTPN6-204ENST00000456013 ZNF226Q9NYT6 803 aa17.05■□□□□ 0.32
PTPN6-204ENST00000456013 MN1Q10571 1320 aaPredicted RBP17.05■□□□□ 0.32
PTPN6-204ENST00000456013 SNPHO15079 494 aa17.04■□□□□ 0.32
PTPN6-204ENST00000456013 KPNA5O15131 536 aa17.04■□□□□ 0.32
PTPN6-204ENST00000456013 ADORA3P0DMS8 318 aa17.04■□□□□ 0.32
PTPN6-204ENST00000456013 SNRPD1P62314 119 aaKnown RBP17.04■□□□□ 0.32
PTPN6-204ENST00000456013 RAE1P78406 368 aaKnown RBP17.04■□□□□ 0.32
PTPN6-204ENST00000456013 GAB1Q13480 694 aa17.04■□□□□ 0.32
PTPN6-204ENST00000456013 DOC2AQ14183 400 aa17.04■□□□□ 0.32
PTPN6-204ENST00000456013 ZNF605Q86T29 641 aa17.04■□□□□ 0.32
PTPN6-204ENST00000456013 AKAP14Q86UN6 197 aa17.04■□□□□ 0.32
PTPN6-204ENST00000456013 DEPDC4Q8N2C3 294 aa17.04■□□□□ 0.32
PTPN6-204ENST00000456013 PARP16Q8N5Y8 322 aa17.04■□□□□ 0.32
PTPN6-204ENST00000456013 ARL14EPQ8N8R7 260 aaPredicted RBP17.04■□□□□ 0.32
PTPN6-204ENST00000456013 SLC43A3Q8NBI5 491 aa17.04■□□□□ 0.32
PTPN6-204ENST00000456013 COQ8BQ96D53 544 aa17.04■□□□□ 0.32
PTPN6-204ENST00000456013 CTRCQ99895 268 aa17.04■□□□□ 0.32
PTPN6-204ENST00000456013 SUV39H2Q9H5I1 410 aa17.04■□□□□ 0.32
PTPN6-204ENST00000456013 BRF2Q9HAW0 419 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms