RNA–Protein interactions for RNA: ENST00000453640.1

SSXP1-201, Transcript of SSX family pseudogene 1, humanhuman

BASIC

Gene SSXP1, Length 473 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP1-201ENST00000453640 LACTB2Q53H82 288 aaPredicted RBP3.01□□□□□ -1.93
SSXP1-201ENST00000453640 SPOUT1Q5T280 376 aaKnown RBP3.01□□□□□ -1.93
SSXP1-201ENST00000453640 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
SSXP1-201ENST00000453640 SUSD4Q5VX71 490 aa3.01□□□□□ -1.93
SSXP1-201ENST00000453640 GDPGP1Q6ZNW5 385 aa3.01□□□□□ -1.93
SSXP1-201ENST00000453640 SH2D6Q7Z4S9 175 aa3.01□□□□□ -1.93
SSXP1-201ENST00000453640 AMIGO1Q86WK6 493 aa3.01□□□□□ -1.93
SSXP1-201ENST00000453640 METTL23Q86XA0 190 aa3.01□□□□□ -1.93
SSXP1-201ENST00000453640 VSIG1Q86XK7 387 aa3.01□□□□□ -1.93
SSXP1-201ENST00000453640 ANKRD13CQ8N6S4 541 aa3.01□□□□□ -1.93
SSXP1-201ENST00000453640 C17orf47Q8NEP4 570 aa3.01□□□□□ -1.93
SSXP1-201ENST00000453640 PIK3R3Q92569 461 aa3.01□□□□□ -1.93
SSXP1-201ENST00000453640 RAD54LQ92698 747 aa3.01□□□□□ -1.93
SSXP1-201ENST00000453640 RASL10AQ92737 203 aa3.01□□□□□ -1.93
SSXP1-201ENST00000453640 P2RX5Q93086 422 aa3.01□□□□□ -1.93
SSXP1-201ENST00000453640 ATXN7L3BQ96GX2 97 aa3.01□□□□□ -1.93
SSXP1-201ENST00000453640 ZMAT2Q96NC0 199 aaKnown RBP3.01□□□□□ -1.93
SSXP1-201ENST00000453640 GBP5Q96PP8 586 aa3.01□□□□□ -1.93
SSXP1-201ENST00000453640 FERMT1Q9BQL6 677 aa3.01□□□□□ -1.93
SSXP1-201ENST00000453640 INPP5KQ9BT40 448 aa3.01□□□□□ -1.93
SSXP1-201ENST00000453640 GTPBP2Q9BX10 602 aaKnown RBP3.01□□□□□ -1.93
SSXP1-201ENST00000453640 SDCBP2Q9H190 292 aa3.01□□□□□ -1.93
SSXP1-201ENST00000453640 CCDC88BA6NC98 1476 aa3.01□□□□□ -1.93
SSXP1-201ENST00000453640 LAMC3Q9Y6N6 1575 aa3□□□□□ -1.93
SSXP1-201ENST00000453640 IL16Q14005 1332 aa3□□□□□ -1.93
SSXP1-201ENST00000453640 LOC105371242A0A075B767 164 aa3□□□□□ -1.93
SSXP1-201ENST00000453640 TRBV4-1A0A0J9YWV2 114 aa3□□□□□ -1.93
SSXP1-201ENST00000453640 SHISA7A6NL88 538 aa3□□□□□ -1.93
SSXP1-201ENST00000453640 WDR46O15213 610 aaKnown RBP3□□□□□ -1.93
SSXP1-201ENST00000453640 BAG3O95817 575 aa3□□□□□ -1.93
SSXP1-201ENST00000453640 C9P02748 559 aa3□□□□□ -1.93
SSXP1-201ENST00000453640 TCF4P15884 667 aa3□□□□□ -1.93
SSXP1-201ENST00000453640 ALDH1B1P30837 517 aa3□□□□□ -1.93
SSXP1-201ENST00000453640 OR3A2P47893 321 aa3□□□□□ -1.93
SSXP1-201ENST00000453640 PGFP49763 221 aa3□□□□□ -1.93
SSXP1-201ENST00000453640 CAPZA1P52907 286 aa3□□□□□ -1.93
SSXP1-201ENST00000453640 IRX4P78413 519 aa3□□□□□ -1.93
SSXP1-201ENST00000453640 TRA2AQ13595 282 aaKnown RBP eCLIP3□□□□□ -1.93
SSXP1-201ENST00000453640 PTPN14Q15678 1187 aa3□□□□□ -1.93
SSXP1-201ENST00000453640 SHEQ5VZ18 495 aa3□□□□□ -1.93
SSXP1-201ENST00000453640 FAM91A1Q658Y4 838 aa3□□□□□ -1.93
SSXP1-201ENST00000453640 KRT77Q7Z794 578 aa3□□□□□ -1.93
SSXP1-201ENST00000453640 CCDC60Q8IWA6 550 aaPredicted RBP3□□□□□ -1.93
SSXP1-201ENST00000453640 OR2L2Q8NH16 312 aa3□□□□□ -1.93
SSXP1-201ENST00000453640 OCC1Q8TAD7 63 aa3□□□□□ -1.93
SSXP1-201ENST00000453640 LRRC15Q8TF66 581 aa3□□□□□ -1.93
SSXP1-201ENST00000453640 TSACCQ96A04 125 aaPredicted RBP3□□□□□ -1.93
SSXP1-201ENST00000453640 CDCA3Q99618 268 aaPredicted RBP3□□□□□ -1.93
SSXP1-201ENST00000453640 TDRD1Q9BXT4 1180 aaKnown RBP3□□□□□ -1.93
SSXP1-201ENST00000453640 NYXQ9GZU5 481 aa3□□□□□ -1.93
SSXP1-201ENST00000453640 HOXD1Q9GZZ0 328 aa3□□□□□ -1.93
SSXP1-201ENST00000453640 PANK3Q9H999 370 aa3□□□□□ -1.93
SSXP1-201ENST00000453640 GNB4Q9HAV0 340 aa3□□□□□ -1.93
SSXP1-201ENST00000453640 WIPI2Q9Y4P8 454 aa3□□□□□ -1.93
SSXP1-201ENST00000453640 PDS5BQ9NTI5 1447 aa3□□□□□ -1.93
SSXP1-201ENST00000453640 TOP2AP11388 1531 aaKnown RBP2.99□□□□□ -1.93
SSXP1-201ENST00000453640 IGSF1Q8N6C5 1336 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 ASB14A6NK59 587 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 NPIPB9F8W1W9 429 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 GBAP04062 536 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 SPP1P10451 314 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 PRKAR1AP10644 381 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 PDGFRAP16234 1089 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 ELAVL4P26378 380 aaKnown RBP2.99□□□□□ -1.93
SSXP1-201ENST00000453640 PDHA2P29803 388 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 TIA1P31483 386 aaKnown RBP eCLIP2.99□□□□□ -1.93
SSXP1-201ENST00000453640 CDX1P47902 265 aaPredicted RBP2.99□□□□□ -1.93
SSXP1-201ENST00000453640 GMPSP49915 693 aaPredicted RBP2.99□□□□□ -1.93
SSXP1-201ENST00000453640 LIMK2P53671 638 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 RBP5P82980 135 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 CD300CQ08708 224 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 SRSF9Q13242 221 aaKnown RBP eCLIP2.99□□□□□ -1.93
SSXP1-201ENST00000453640 TRIM29Q14134 588 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 OPCMLQ14982 345 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 NONOQ15233 471 aaKnown RBP eCLIP2.99□□□□□ -1.93
SSXP1-201ENST00000453640 RBBP7Q16576 425 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 LRRC73Q5JTD7 316 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 TXNRD3NBQ6F5E7 133 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 PET117Q6UWS5 81 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 ANKRD33Q7Z3H0 272 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 SPATA19Q7Z5L4 167 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 NRARPQ7Z6K4 114 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 RCOR2Q8IZ40 523 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 METTL4Q8N3J2 472 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 FBXL16Q8N461 479 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 FAM89BQ8N5H3 189 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 LINC00612Q8N6U2 182 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 NKAIN3Q8N8D7 197 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 SLC26A7Q8TE54 656 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 CHPT1Q8WUD6 406 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 DEPDC1BQ8WUY9 529 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 NSMAFQ92636 917 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 PGM2Q96G03 612 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 SLC45A3Q96JT2 553 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 GAL3ST4Q96RP7 486 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 EGLN3Q9H6Z9 239 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 LMAN1LQ9HAT1 526 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 ZCCHC17Q9NP64 241 aaKnown RBP2.99□□□□□ -1.93
SSXP1-201ENST00000453640 B3GAT2Q9NPZ5 323 aa2.99□□□□□ -1.93
SSXP1-201ENST00000453640 PRR34Q9NV39 138 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms