RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 SIAH3Q8IW03 269 aa8.32□□□□□ -1.08
DEPDC1B-202ENST00000453022 CHERPQ8IWX8 916 aaKnown RBP8.32□□□□□ -1.08
DEPDC1B-202ENST00000453022 CPNE9Q8IYJ1 553 aa8.32□□□□□ -1.08
DEPDC1B-202ENST00000453022 KCT2Q8NC54 265 aa8.32□□□□□ -1.08
DEPDC1B-202ENST00000453022 ZCCHC10Q8TBK6 192 aa8.32□□□□□ -1.08
DEPDC1B-202ENST00000453022 CD200R1Q8TD46 325 aa8.32□□□□□ -1.08
DEPDC1B-202ENST00000453022 THAP3Q8WTV1 239 aaPredicted RBP8.32□□□□□ -1.08
DEPDC1B-202ENST00000453022 KCNJ9Q92806 393 aa8.32□□□□□ -1.08
DEPDC1B-202ENST00000453022 TM4SF19Q96DZ7 209 aa8.32□□□□□ -1.08
DEPDC1B-202ENST00000453022 MAGED4Q96JG8 741 aa8.32□□□□□ -1.08
DEPDC1B-202ENST00000453022 ZNF354BQ96LW1 612 aa8.32□□□□□ -1.08
DEPDC1B-202ENST00000453022 GPR21Q99679 349 aa8.32□□□□□ -1.08
DEPDC1B-202ENST00000453022 EBNA1BP2Q99848 306 aaKnown RBP8.32□□□□□ -1.08
DEPDC1B-202ENST00000453022 RBCK1Q9BYM8 510 aa8.32□□□□□ -1.08
DEPDC1B-202ENST00000453022 KCNK13Q9HB14 408 aa8.32□□□□□ -1.08
DEPDC1B-202ENST00000453022 TMEM184CQ9NVA4 438 aa8.32□□□□□ -1.08
DEPDC1B-202ENST00000453022 C19orf25Q9UFG5 118 aaPredicted RBP8.32□□□□□ -1.08
DEPDC1B-202ENST00000453022 GUCA1BQ9UMX6 200 aa8.32□□□□□ -1.08
DEPDC1B-202ENST00000453022 ZKSCAN5Q9Y2L8 839 aa8.32□□□□□ -1.08
DEPDC1B-202ENST00000453022 KCNE1BA0A087WTH5 132 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 ZCWPW2A0A1B0GU75 182 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 FEZF1A0PJY2 475 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 KIF5CO60282 957 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 LCMT2O60294 686 aaKnown RBP8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 NEURL1O76050 574 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 FGGP02679 453 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 MYBL2P10244 700 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 SLC1A2P43004 574 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 KIR3DL1P43629 444 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 AGTR2P50052 363 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 RIPPLY3P57055 190 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 KRTAP10-9P60411 292 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 CSNK1G2P78368 415 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 RHAGQ02094 409 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 CTBP1Q13363 440 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 DHX34Q14147 1143 aaKnown RBP8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 RPS6KA1Q15418 735 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 OR1C1Q15619 314 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 TRIP13Q15645 432 aaPredicted RBP8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 TTLL9Q3SXZ7 439 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 SPINK14Q6IE38 97 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 PAPD4Q6PIY7 484 aaKnown RBP8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 MBOAT1Q6ZNC8 495 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 UBE2R2Q712K3 238 aaPredicted RBP8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 PCGF5Q86SE9 256 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 SPPL2CQ8IUH8 684 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 AGGF1Q8N302 714 aaeCLIP8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 M1APQ8TC57 530 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 TSLPQ969D9 159 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 ZNF669Q96BR6 464 aaPredicted RBP8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 TRIM51Q9BSJ1 452 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 TSGA10Q9BZW7 698 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 MMP25Q9NPA2 562 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 CCDC177Q9NQR7 707 aaPredicted RBP8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 LANCL2Q9NS86 450 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 KLHL42Q9P2K6 505 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 ADAMTS6Q9UKP5 1117 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 VPS9D1Q9Y2B5 631 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 MEMO1Q9Y316 297 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 DHRS7Q9Y394 339 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 MAP1AP78559 2803 aaPredicted RBP8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 PHF3Q92576 2039 aaKnown RBP8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 HRNRQ86YZ3 2850 aaPredicted RBP8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 VPS13CQ709C8 3753 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 FAM237BA0A1B0GVD1 139 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 CTAGE9A4FU28 777 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 ZNF860A6NHJ4 632 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 GABRR3A8MPY1 467 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 NPIPA5E9PKD4 350 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 TTI1O43156 1089 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 ZBTB14O43829 449 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 CDC123O75794 336 aaPredicted RBP8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 ESRRAP11474 423 aaPredicted RBP8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 ENO3P13929 434 aaPredicted RBP8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 PAMP19021 973 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 EEF1DP29692 281 aaKnown RBP8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 VPS41P49754 854 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 CASP6P55212 293 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 HSF1Q00613 529 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 TIAL1Q01085 375 aaKnown RBP eCLIP8.31□□□□□ -1.082e-6■■□□□ 12.1
DEPDC1B-202ENST00000453022 ALDH6A1Q02252 535 aaKnown RBP8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 USP10Q14694 798 aaKnown RBP8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 ABRAXAS2Q15018 415 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 EXT1Q16394 746 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 MEP1AQ16819 746 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 SFT2D3Q587I9 215 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 RNFT1Q5M7Z0 435 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 ZNF468Q5VIY5 522 aaPredicted RBP8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 ARMC3Q5W041 872 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 CASC4Q6P4E1 433 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 GALNTL5Q7Z4T8 443 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 SLC26A11Q86WA9 606 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 ZNF227Q86WZ6 799 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 OR5T3Q8NGG3 340 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 MTFMTQ96DP5 389 aaKnown RBP8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 PEX11GQ96HA9 241 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 UTP23Q9BRU9 249 aaKnown RBP8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 ANKHQ9HCJ1 492 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 NPIPA1Q9UND3 350 aa8.31□□□□□ -1.08
DEPDC1B-202ENST00000453022 NAALAD2Q9Y3Q0 740 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms