RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 SERPINA7P05543 415 aa11.8□□□□□ -0.52
CPSF4-208ENST00000452047 CELA2AP08217 269 aa11.8□□□□□ -0.52
CPSF4-208ENST00000452047 CYC1P08574 325 aa11.8□□□□□ -0.52
CPSF4-208ENST00000452047 SLC35G6P0C7Q6 338 aa11.8□□□□□ -0.52
CPSF4-208ENST00000452047 RNF224P0DH78 156 aa11.8□□□□□ -0.52
CPSF4-208ENST00000452047 CXCR2P25025 360 aa11.8□□□□□ -0.52
CPSF4-208ENST00000452047 GRK3P35626 688 aa11.8□□□□□ -0.52
CPSF4-208ENST00000452047 TSFMP43897 325 aaKnown RBP11.8□□□□□ -0.52
CPSF4-208ENST00000452047 GLRBP48167 497 aa11.8□□□□□ -0.52
CPSF4-208ENST00000452047 ZNF460Q14592 562 aa11.8□□□□□ -0.52
CPSF4-208ENST00000452047 ZNF169Q14929 603 aaPredicted RBP11.8□□□□□ -0.52
CPSF4-208ENST00000452047 B3GNTL1Q67FW5 361 aaPredicted RBP11.8□□□□□ -0.52
CPSF4-208ENST00000452047 LINC00696Q6ZRV3 163 aa11.8□□□□□ -0.52
CPSF4-208ENST00000452047 RIPOR1Q6ZS17 1223 aa11.8□□□□□ -0.52
CPSF4-208ENST00000452047 STRA8Q7Z7C7 330 aa11.8□□□□□ -0.52
CPSF4-208ENST00000452047 ASPGQ86U10 573 aa11.8□□□□□ -0.52
CPSF4-208ENST00000452047 AMER2Q8N7J2 671 aa11.8□□□□□ -0.52
CPSF4-208ENST00000452047 MFSD9Q8NBP5 474 aa11.8□□□□□ -0.52
CPSF4-208ENST00000452047 OR51Q1Q8NH59 317 aa11.8□□□□□ -0.52
CPSF4-208ENST00000452047 ZCCHC10Q8TBK6 192 aa11.8□□□□□ -0.52
CPSF4-208ENST00000452047 DNAJB14Q8TBM8 379 aa11.8□□□□□ -0.52
CPSF4-208ENST00000452047 BRIX1Q8TDN6 353 aaKnown RBP11.8□□□□□ -0.52
CPSF4-208ENST00000452047 ATL1Q8WXF7 558 aa11.8□□□□□ -0.52
CPSF4-208ENST00000452047 ANKRD7Q92527 254 aa11.8□□□□□ -0.52
CPSF4-208ENST00000452047 ANP32BQ92688 251 aaKnown RBP11.8□□□□□ -0.52
CPSF4-208ENST00000452047 NEIL2Q969S2 332 aa11.8□□□□□ -0.52
CPSF4-208ENST00000452047 LMF1Q96S06 567 aa11.8□□□□□ -0.52
CPSF4-208ENST00000452047 TRIM54Q9BYV2 358 aa11.8□□□□□ -0.52
CPSF4-208ENST00000452047 SMYD2Q9NRG4 433 aa11.8□□□□□ -0.52
CPSF4-208ENST00000452047 HCN3Q9P1Z3 774 aa11.8□□□□□ -0.52
CPSF4-208ENST00000452047 SNX24Q9Y343 169 aa11.8□□□□□ -0.52
CPSF4-208ENST00000452047 SLC22A7Q9Y694 548 aa11.8□□□□□ -0.52
CPSF4-208ENST00000452047 FAM95CA0A1B0GW59 222 aa11.79□□□□□ -0.52
CPSF4-208ENST00000452047 TRBC2A0A5B9 178 aa11.79□□□□□ -0.52
CPSF4-208ENST00000452047 PABPN1LA6NDY0 278 aaKnown RBP11.79□□□□□ -0.52
CPSF4-208ENST00000452047 SGK494L7N484 410 aa11.79□□□□□ -0.52
CPSF4-208ENST00000452047 CDC7O00311 574 aa11.79□□□□□ -0.52
CPSF4-208ENST00000452047 C8orf89P0DMQ9 161 aa11.79□□□□□ -0.52
CPSF4-208ENST00000452047 XCR1P46094 333 aa11.79□□□□□ -0.52
CPSF4-208ENST00000452047 CCR8P51685 355 aa11.79□□□□□ -0.52
CPSF4-208ENST00000452047 TAS2R39P59534 338 aa11.79□□□□□ -0.52
CPSF4-208ENST00000452047 MRPS25P82663 173 aaKnown RBP11.79□□□□□ -0.52
CPSF4-208ENST00000452047 MEF2AQ02078 507 aaPredicted RBP11.79□□□□□ -0.52
CPSF4-208ENST00000452047 TLR1Q15399 786 aa11.79□□□□□ -0.52
CPSF4-208ENST00000452047 CATSPEREQ5SY80 951 aa11.79□□□□□ -0.52
CPSF4-208ENST00000452047 LANCL3Q6ZV70 420 aa11.79□□□□□ -0.52
CPSF4-208ENST00000452047 ZBED8Q8IZ13 594 aa11.79□□□□□ -0.52
CPSF4-208ENST00000452047 AFAP1L2Q8N4X5 818 aa11.79□□□□□ -0.52
CPSF4-208ENST00000452047 ZNF740Q8NDX6 193 aa11.79□□□□□ -0.52
CPSF4-208ENST00000452047 SSC4DQ8WTU2 575 aa11.79□□□□□ -0.52
CPSF4-208ENST00000452047 SLC13A3Q8WWT9 602 aa11.79□□□□□ -0.52
CPSF4-208ENST00000452047 MOCOSQ96EN8 888 aa11.79□□□□□ -0.52
CPSF4-208ENST00000452047 CNDP1Q96KN2 507 aa11.79□□□□□ -0.52
CPSF4-208ENST00000452047 IMMP1LQ96LU5 166 aa11.79□□□□□ -0.52
CPSF4-208ENST00000452047 SPNS1Q9H2V7 528 aa11.79□□□□□ -0.52
CPSF4-208ENST00000452047 RHOJQ9H4E5 214 aa11.79□□□□□ -0.52
CPSF4-208ENST00000452047 ANKHQ9HCJ1 492 aa11.79□□□□□ -0.52
CPSF4-208ENST00000452047 CELSR2Q9HCU4 2923 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 CENPEQ02224 2701 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 TEX15Q9BXT5 2789 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 CTAGE15A4D2H0 777 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 NPEPPSL1A6NEC2 478 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 OR2W5A6NFC9 320 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 ANKUB1A6NFN9 424 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 FAM187AA6NFU0 413 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 E2F3O00716 465 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 NDC80O14777 642 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 NDUFS4O43181 175 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 RAD51CO43502 376 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 OR1F1O43749 312 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 RDH16O75452 317 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 PIAS1O75925 651 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 WISP3O95389 354 aaPredicted RBP11.78□□□□□ -0.52
CPSF4-208ENST00000452047 ITGAMP11215 1152 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 SAT1P21673 171 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 CDKL1Q00532 357 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 PWP1Q13610 501 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 MINDY4Q4G0A6 757 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 CTAGE6Q86UF2 777 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 CEP97Q8IW35 865 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 NKAPQ8N5F7 415 aaKnown RBP11.78□□□□□ -0.52
CPSF4-208ENST00000452047 SIRT6Q8N6T7 355 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 BBOF1Q8ND07 529 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 CATSPER1Q8NEC5 780 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 SPATA4Q8NEY3 305 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 PRR7Q8TB68 274 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 GRHL3Q8TE85 626 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 ANKRD49Q8WVL7 239 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 SLC5A11Q8WWX8 675 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 VPS39Q96JC1 886 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 TSNARE1Q96NA8 513 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 CYTH2Q99418 400 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 ERP44Q9BS26 406 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 TUBB6Q9BUF5 446 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 POPDC3Q9HBV1 291 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 LRRC4CQ9HCJ2 640 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 NSMCE4AQ9NXX6 385 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 GRHL1Q9NZI5 618 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 WHRNQ9P202 907 aa11.78□□□□□ -0.52
CPSF4-208ENST00000452047 PTGFRNQ9P2B2 879 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms