RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 TMEM160Q9NX00 188 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 HACD3Q9P035 362 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.35□□□□□ -1.23
LINC01961-201ENST00000449954 ZC3H7BQ9UGR2 993 aaKnown RBP7.35□□□□□ -1.23
LINC01961-201ENST00000449954 KLHL20Q9Y2M5 609 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 HIF3AQ9Y2N7 669 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 TDRKHQ9Y2W6 561 aaKnown RBP7.35□□□□□ -1.23
LINC01961-201ENST00000449954 PCDHGB3Q9Y5G1 929 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 SPO11Q9Y5K1 396 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 KMT2CQ8NEZ4 4911 aaKnown RBP7.35□□□□□ -1.23
LINC01961-201ENST00000449954 TRRAPQ9Y4A5 3859 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 PRKDCP78527 4128 aaKnown RBP7.35□□□□□ -1.23
LINC01961-201ENST00000449954 SH3D21A4FU49 640 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 FCHO1O14526 889 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 FFAR3O14843 346 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 GPR42O15529 346 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 SUSD5O60279 629 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 CTSVO60911 334 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 GFPT2O94808 682 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 PGRP06401 933 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 PKLRP30613 574 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 PCK1P35558 622 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 EFNA3P52797 238 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 PPIAP62937 165 aaKnown RBP7.34□□□□□ -1.23
LINC01961-201ENST00000449954 VEZF1Q14119 521 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 TRIM14Q14142 442 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 BOLA3Q53S33 107 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 CCDC122Q5T0U0 273 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 GARNL3Q5VVW2 1013 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 LIPNQ5VXI9 398 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 FRMPD2BQ6IN97 320 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 C12orf54Q6X4T0 127 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 RNF44Q7L0R7 432 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 OTOAQ7RTW8 1153 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 SLC22A16Q86VW1 577 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 ZDHHC13Q8IUH4 622 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 AMER2Q8N7J2 671 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 MAPK1IP1LQ8NDC0 245 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 ZNF398Q8TD17 642 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 FAF2Q96CS3 445 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 NTNG2Q96CW9 530 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 MMABQ96EY8 250 aaPredicted RBP7.34□□□□□ -1.23
LINC01961-201ENST00000449954 ZBED6CLQ96FA7 236 aaPredicted RBP7.34□□□□□ -1.23
LINC01961-201ENST00000449954 IMP4Q96G21 291 aaKnown RBP7.34□□□□□ -1.23
LINC01961-201ENST00000449954 PCDHB18PQ96TA0 734 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 CYTH2Q99418 400 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 LPAR4Q99677 370 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 BEX2Q9BXY8 128 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 TRIM7Q9C029 511 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 CXorf56Q9H5V9 222 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 ASB8Q9H765 288 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 UBTD1Q9HAC8 227 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 NPHS2Q9NP85 383 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 ZNF701Q9NV72 531 aaPredicted RBP7.34□□□□□ -1.23
LINC01961-201ENST00000449954 PARVAQ9NVD7 372 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 ACAD8Q9UKU7 415 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 KLK4Q9Y5K2 254 aa7.34□□□□□ -1.23
LINC01961-201ENST00000449954 ARHGAP21Q5T5U3 1957 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 EIF1AYO14602 144 aaKnown RBP7.33□□□□□ -1.24
LINC01961-201ENST00000449954 TUBB4AP04350 444 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 EIF2S1P05198 315 aaKnown RBP7.33□□□□□ -1.24
LINC01961-201ENST00000449954 ATP1B2P14415 290 aaPredicted RBP7.33□□□□□ -1.24
LINC01961-201ENST00000449954 EGR1P18146 543 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 PRKCIP41743 596 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 MTIF2P46199 727 aaKnown RBP7.33□□□□□ -1.24
LINC01961-201ENST00000449954 GPR85P60893 370 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 PLGLB1Q02325 96 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 MAMLD1Q13495 774 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 PTK6Q13882 451 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 NAA25Q14CX7 972 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 PAFAH1B3Q15102 231 aaKnown RBP7.33□□□□□ -1.24
LINC01961-201ENST00000449954 SF1Q15637 639 aaKnown RBP7.33□□□□□ -1.24
LINC01961-201ENST00000449954 NFKBIBQ15653 356 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 MAN2A1Q16706 1144 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 PRTGQ2VWP7 1150 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 MINDY4Q4G0A6 757 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 CCDC38Q502W7 563 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 C6orf52Q5T4I8 152 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 CCDC183Q5T5S1 534 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 NDUFAF5Q5TEU4 345 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 ISM2Q6H9L7 571 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 PPP1R2P3Q6NXS1 205 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 PAPD4Q6PIY7 484 aaKnown RBP7.33□□□□□ -1.24
LINC01961-201ENST00000449954 TRILQ7L0X0 811 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 GLT6D1Q7Z4J2 308 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 ANKRD37Q7Z713 158 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 CYP4Z2PQ8N1L4 340 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 FBXW8Q8N3Y1 598 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 NAT14Q8WUY8 206 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 HSPH1Q92598 858 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 TADA1Q96BN2 335 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 ULK4Q96C45 1275 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 REG4Q9BYZ8 158 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 DRC3Q9H069 523 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 NDST4Q9H3R1 872 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 PCDH18Q9HCL0 1135 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 MAN1B1Q9UKM7 699 aa7.33□□□□□ -1.24
LINC01961-201ENST00000449954 DSCAMO60469 2012 aa7.32□□□□□ -1.24
LINC01961-201ENST00000449954 CR1P17927 2039 aa7.32□□□□□ -1.24
LINC01961-201ENST00000449954 SOWAHDA6NJG2 315 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms