RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 DHRS4L2Q6PKH6 230 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 CHMP1BQ7LBR1 199 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 CNTN4Q8IWV2 1026 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 ADAMTS16Q8TE57 1224 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 DEDD2Q8WXF8 326 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 PTPN18Q99952 460 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 OR51B5Q9H339 312 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 SMURF1Q9HCE7 757 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 TRBC2A0A5B9 178 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 SOBPA7XYQ1 873 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 STX16O14662 325 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 JRKO75564 520 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 ALPPL2P10696 532 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 PIM1P11309 404 aaPredicted RBP12□□□□□ -0.49
UBE3B-204ENST00000449510 CD72P21854 359 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 RPL9P32969 192 aaKnown RBP12□□□□□ -0.49
UBE3B-204ENST00000449510 CNR2P34972 360 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 HNRNPFP52597 415 aaKnown RBP12□□□□□ -0.49
UBE3B-204ENST00000449510 SUZ12Q15022 739 aaKnown RBP12□□□□□ -0.49
UBE3B-204ENST00000449510 FRG2Q64ET8 278 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 ZNF548Q8NEK5 533 aaPredicted RBP12□□□□□ -0.49
UBE3B-204ENST00000449510 TSPEARQ8WU66 669 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 EFHD2Q96C19 240 aaPredicted RBP12□□□□□ -0.49
UBE3B-204ENST00000449510 FRG2BQ96QU4 278 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 MBOAT4Q96T53 435 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 UHRF1Q96T88 793 aaPredicted RBP12□□□□□ -0.49
UBE3B-204ENST00000449510 GAL3ST1Q99999 423 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 GTF2A1LQ9UNN4 478 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 LAMB1P07942 1786 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 SLC30A4O14863 429 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 SCAMP1O15126 338 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 SMAD9O15198 467 aaKnown RBP12□□□□□ -0.49
UBE3B-204ENST00000449510 GABARAPO95166 117 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 PAPSS2O95340 614 aaPredicted RBP12□□□□□ -0.49
UBE3B-204ENST00000449510 HPRP00739 348 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 IL7P13232 177 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 SDHBP21912 280 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 CPN2P22792 545 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 AP2S1P53680 142 aaPredicted RBP12□□□□□ -0.49
UBE3B-204ENST00000449510 FGFBP1Q14512 234 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 HECTD3Q5T447 861 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 NADSYN1Q6IA69 706 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 NOXRED1Q6NXP6 359 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 SUSD1Q6UWL2 747 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 LAX1Q8IWV1 398 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 PAWRQ96IZ0 340 aaKnown RBP12□□□□□ -0.49
UBE3B-204ENST00000449510 FCRL4Q96PJ5 515 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 CTRCQ99895 268 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 PPIL3Q9H2H8 161 aaKnown RBP12□□□□□ -0.49
UBE3B-204ENST00000449510 FLRT1Q9NZU1 646 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 TLR6Q9Y2C9 796 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 J3KTA2 159 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 NME6O75414 186 aaPredicted RBP11.99□□□□□ -0.49
UBE3B-204ENST00000449510 PTTG1O95997 202 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 PRPS2P11908 318 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 KCNE1P15382 129 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 CELP19835 753 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 DNAJB1P25685 340 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 PTGER1P34995 402 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 ITGA1P56199 1179 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 GABARAPL2P60520 117 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 GCNT6Q5T4J0 391 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 TUBA3EQ6PEY2 450 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 PRSS55Q6UWB4 352 aaPredicted RBP11.99□□□□□ -0.49
UBE3B-204ENST00000449510 RASSF6Q6ZTQ3 369 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 RFPL4BQ6ZWI9 263 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 SCD5Q86SK9 330 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 SLC35A5Q9BS91 424 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 NANSQ9NR45 359 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 CCDC59Q9P031 241 aaKnown RBP11.99□□□□□ -0.49
UBE3B-204ENST00000449510 VPS29Q9UBQ0 182 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 LSM7Q9UK45 103 aaKnown RBP11.99□□□□□ -0.49
UBE3B-204ENST00000449510 CDV3Q9UKY7 258 aaKnown RBP11.99□□□□□ -0.49
UBE3B-204ENST00000449510 KCNE2Q9Y6J6 123 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 GFRA2O00451 464 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 ACSL4O60488 711 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 CPNE6O95741 557 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 SNAI1O95863 264 aaPredicted RBP11.99□□□□□ -0.49
UBE3B-204ENST00000449510 ANXA8P13928 327 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 SLAMF1Q13291 335 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 SCARB2Q14108 478 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 GPAT3Q53EU6 434 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 ATAT1Q5SQI0 421 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 VARS2Q5ST30 1063 aaKnown RBP11.99□□□□□ -0.49
UBE3B-204ENST00000449510 PNCKQ6P2M8 343 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 DLEU7Q6UYE1 221 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 B3GLCTQ6Y288 498 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 ZSWIM9Q86XI8 627 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 NAGSQ8N159 534 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 B3GNT7Q8NFL0 401 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 MDGA1Q8NFP4 955 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 CD200R1Q8TD46 325 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 CLIP3Q96DZ5 547 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 CD244Q9BZW8 370 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 TMEM98Q9Y2Y6 226 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 ALPK2Q86TB3 2170 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 BRWD1Q9NSI6 2320 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 TLR4O00206 839 aa11.99□□□□□ -0.49
UBE3B-204ENST00000449510 KPNA3O00505 521 aaPredicted RBP11.99□□□□□ -0.49
UBE3B-204ENST00000449510 CATP04040 527 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms