RNA–Protein interactions for RNA: ENST00000449407.6

SORBS2-231, Transcript of sorbin and SH3 domain containing 2, human

TSL 1 (best) BASIC

Gene SORBS2, Length 3,049 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS2-231	ENST00000449407	COL11A1	P12107	1806 aa	Predicted RBP	10.03	□□□□□ -0.8
SORBS2-231	ENST00000449407	LAMA2	P24043	3122 aa	Known RBP	10.03	□□□□□ -0.8
SORBS2-231	ENST00000449407	FFAR2	O15552	330 aa		10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	PEX11B	O96011	259 aa		10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	OTC	P00480	354 aa		10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	IGFBP1	P08833	259 aa	Predicted RBP	10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	OR4Q2	P0C623	313 aa		10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	SLC2A2	P11168	524 aa	Predicted RBP	10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	SRC	P12931	536 aa		10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	M6PR	P20645	277 aa		10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	ALAS2	P22557	587 aa		10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	OLR1	P78380	273 aa		10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	TAGLN	Q01995	201 aa	Known RBP	10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	IL18	Q14116	193 aa		10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	SUZ12	Q15022	739 aa	Known RBP	10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	TIMM50	Q3ZCQ8	353 aa		10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	TOR1AIP1	Q5JTV8	583 aa		10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	SLC35F1	Q5T1Q4	408 aa		10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	ANKRD54	Q6NXT1	300 aa		10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	B3GLCT	Q6Y288	498 aa		10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	AGMO	Q6ZNB7	445 aa		10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	ZNF598	Q86UK7	904 aa	Known RBP	10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	ATCAY	Q86WG3	371 aa		10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	MICALL2	Q8IY33	904 aa		10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	ARRDC2	Q8TBH0	407 aa		10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	SETD6	Q8TBK2	473 aa		10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	DNAJB3	Q8WWF6	145 aa		10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	ST8SIA2	Q92186	375 aa		10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	SERHL	Q9NQF3	203 aa		10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	FAM8A1	Q9UBU6	413 aa		10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	MAN2B2	Q9Y2E5	1009 aa		10.02	□□□□□ -0.8
SORBS2-231	ENST00000449407	SI	P14410	1827 aa		10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	ISM1	B1AKI9	464 aa		10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	FPGT	O14772	594 aa		10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	LZTS3	O60299	673 aa	Predicted RBP	10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	ETV3	P41162	512 aa		10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	RPS5	P46782	204 aa	Known RBP	10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	AP2S1	P53680	142 aa	Predicted RBP	10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	ABHD18	Q0P651	414 aa		10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	PPIG	Q13427	754 aa	Known RBP eCLIP	10.02	□□□□□ -0.81	1e-9	■■■■■ 35.1
SORBS2-231	ENST00000449407	VMAC	Q2NL98	169 aa		10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	RNASE12	Q5GAN4	147 aa	Known RBP	10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	PIK3R6	Q5UE93	754 aa		10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	ATG9B	Q674R7	924 aa		10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	ANKS3	Q6ZW76	656 aa		10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	ADAMTSL2	Q86TH1	951 aa		10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	PLCZ1	Q86YW0	608 aa		10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	ZZZ3	Q8IYH5	903 aa		10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	LGI4	Q8N135	537 aa		10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	ZFP41	Q8N8Y5	198 aa		10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	C3orf58	Q8NDZ4	430 aa		10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	SELENOM	Q8WWX9	145 aa		10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	NELL1	Q92832	810 aa		10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	PEX13	Q92968	403 aa		10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	UPRT	Q96BW1	309 aa		10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	RPRD1A	Q96P16	312 aa	Predicted RBP	10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	LINC00597	Q9H2U6	94 aa		10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	CLMP	Q9H6B4	373 aa		10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	TXNRD2	Q9NNW7	524 aa		10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	ASAH2	Q9NR71	780 aa		10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	ERVW-1	Q9UQF0	538 aa		10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	TNPO3	Q9Y5L0	923 aa	Known RBP	10.02	□□□□□ -0.81
SORBS2-231	ENST00000449407	TRAV6	A0A075B6T7	132 aa		10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	HNRNPCL2	B2RXH8	293 aa		10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	SERPINI2	O75830	405 aa		10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	CTRB1	P17538	263 aa		10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	PNPLA4	P41247	253 aa		10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	MAGEA2	P43356	314 aa		10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	MAP2K3	P46734	347 aa		10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	RPL6	Q02878	288 aa	Known RBP	10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	RPA4	Q13156	261 aa		10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	EXOC3L2	Q2M3D2	409 aa		10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	FBXO43	Q4G163	708 aa		10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	CTRB2	Q6GPI1	263 aa		10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	CHMP1B	Q7LBR1	199 aa		10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	KRT73	Q86Y46	540 aa		10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	CCDC117	Q8IWD4	279 aa	Predicted RBP	10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	BBS7	Q8IWZ6	715 aa		10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407		Q8N402	240 aa		10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	DNAJC5G	Q8N7S2	189 aa		10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	AKAP1	Q92667	903 aa	Known RBP eCLIP	10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	SH3KBP1	Q96B97	665 aa		10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	C1GALT1C1	Q96EU7	318 aa		10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	SMARCD1	Q96GM5	515 aa		10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	QRFPR	Q96P65	431 aa		10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	NMUR1	Q9HB89	426 aa		10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	BEX1	Q9HBH7	125 aa		10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	HHATL	Q9HCP6	504 aa		10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	ELOVL2	Q9NXB9	296 aa		10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	MGAT4A	Q9UM21	535 aa		10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	PPT2	Q9UMR5	302 aa		10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	BRCA1	P38398	1863 aa	Known RBP	10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	IFRD1	O00458	451 aa	Predicted RBP	10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	FGF10	O15520	208 aa	Predicted RBP	10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	SUV39H1	O43463	412 aa		10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	NCR1	O76036	304 aa		10.01	□□□□□ -0.81
SORBS2-231	ENST00000449407	WARS	P23381	471 aa	Known RBP	10.01	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms