RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 BTRCQ9Y297 605 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 PCDHB5Q9Y5E4 795 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 IL10RBQ08334 325 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 GRB7Q14451 532 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 NR6A1Q15406 480 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 FAM86B1Q8N7N1 296 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 DBF4BQ8NFT6 615 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 CIDECQ96AQ7 238 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 NUDT4Q9NZJ9 180 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 OGDHLQ9ULD0 1010 aa13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 PRG3Q9Y2Y8 225 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-204ENST00000449372 RGS14O43566 566 aa13.02□□□□□ -0.32
SYNGAP1-204ENST00000449372 RAMP2O60895 175 aa13.02□□□□□ -0.32
SYNGAP1-204ENST00000449372 ZDHHC11BP0C7U3 371 aa13.02□□□□□ -0.32
SYNGAP1-204ENST00000449372 TTPAP49638 278 aa13.02□□□□□ -0.32
SYNGAP1-204ENST00000449372 PTPN5P54829 565 aa13.02□□□□□ -0.32
SYNGAP1-204ENST00000449372 S100A12P80511 92 aa13.02□□□□□ -0.32
SYNGAP1-204ENST00000449372 CYP4Z2PQ8N1L4 340 aa13.02□□□□□ -0.32
SYNGAP1-204ENST00000449372 COQ8BQ96D53 544 aa13.02□□□□□ -0.32
SYNGAP1-204ENST00000449372 REPS1Q96D71 796 aa13.02□□□□□ -0.32
SYNGAP1-204ENST00000449372 TBCDQ9BTW9 1192 aa13.02□□□□□ -0.32
SYNGAP1-204ENST00000449372 MAGIXQ9H6Y5 334 aa13.02□□□□□ -0.32
SYNGAP1-204ENST00000449372 PTGDR2Q9Y5Y4 395 aa13.02□□□□□ -0.32
SYNGAP1-204ENST00000449372 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 NUPL2O15504 423 aaKnown RBP13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 IFNA14P01570 189 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 F8A1P23610 371 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 SUOXP51687 545 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 MRPL28Q13084 256 aaKnown RBP13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 KCNC3Q14003 757 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 TATDN3Q17R31 274 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 ZNF782Q6ZMW2 699 aaPredicted RBP13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 METTL6Q8TCB7 284 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 FCGR1BQ92637 280 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 SLC47A1Q96FL8 570 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 HYLS1Q96M11 299 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 ELOVL6Q9H5J4 265 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 RASSF1Q9NS23 344 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 INTS7Q9NVH2 962 aaKnown RBP13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 UXTQ9UBK9 157 aaPredicted RBP13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 PRR23AA6NEV1 266 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 OR6C75A6NL08 312 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 SLC28A1O00337 649 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 DCTP40126 519 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 SLC11A1P49279 550 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 GBX1Q14549 363 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 CORO6Q6QEF8 472 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 TMEM179BQ7Z7N9 219 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 TMEM173Q86WV6 379 aaPredicted RBP13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 ZFAND4Q86XD8 727 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 MFSD6LQ8IWD5 586 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 GPALPP1Q8IXQ4 340 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 ZNF366Q8N895 744 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 SGTBQ96EQ0 304 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 SEC22CQ9BRL7 303 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 TMEM168Q9H0V1 697 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 C11orf54Q9H0W9 315 aaPredicted RBP13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 DCAF16Q9NXF7 216 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 TMEFF2Q9UIK5 374 aaPredicted RBP13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 PCDHGB3Q9Y5G1 929 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 GMPPBQ9Y5P6 360 aa13.02□□□□□ -0.33
SYNGAP1-204ENST00000449372 NT5C1B-RDH14C9J2C7 533 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 PRSS44E7EML9 344 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 PITPNM1O00562 1244 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 UBFD1O14562 309 aaKnown RBP13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 OTCP00480 354 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 ALAS2P22557 587 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 CHRNA4P43681 627 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 PIK3CGP48736 1102 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 GBX2P52951 348 aaPredicted RBP13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 TBX4P57082 545 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 MAB21L1Q13394 359 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 ZNF273Q14593 569 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 GPR19Q15760 415 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 GRK1Q15835 563 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 FAM209BQ5JX69 171 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 ENPP6Q6UWR7 440 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 SLC46A3Q7Z3Q1 461 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 C9orf62Q8N4C0 152 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 ATAD1Q8NBU5 361 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 ENKURQ8TC29 256 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 MCCC1Q96RQ3 725 aaPredicted RBP13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 ZNF382Q96SR6 550 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 TRIM45Q9H8W5 580 aaPredicted RBP13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 ABCB8Q9NUT2 735 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 ACTL7AQ9Y615 435 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 MIA3Q5JRA6 1907 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 LTBP2Q14767 1821 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 BTN3A1O00481 513 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 YKT6O15498 198 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 WDR47O94967 919 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 HMGN1P05114 100 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 CPN2P22792 545 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 MAPK1P28482 360 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 IHHQ14623 411 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 ANGPT1Q15389 498 aa13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 ZC3H12BQ5HYM0 836 aaKnown RBP13.01□□□□□ -0.33
SYNGAP1-204ENST00000449372 MS4A13Q5J8X5 152 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms