RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 MACROD1Q9BQ69 325 aa14□□□□□ -0.17
TNF-208ENST00000449264 RHBGQ9H310 441 aa14□□□□□ -0.17
TNF-208ENST00000449264 AKTIPQ9H8T0 292 aa14□□□□□ -0.17
TNF-208ENST00000449264 FAM60AQ9NP50 221 aa14□□□□□ -0.17
TNF-208ENST00000449264 ZFP69BQ9UJL9 534 aa14□□□□□ -0.17
TNF-208ENST00000449264 SPTBP11277 2137 aa13.99□□□□□ -0.17
TNF-208ENST00000449264 D6RAR5 112 aa13.99□□□□□ -0.17
TNF-208ENST00000449264 AGRPO00253 132 aa13.99□□□□□ -0.17
TNF-208ENST00000449264 SAP18O00422 153 aaKnown RBP13.99□□□□□ -0.17
TNF-208ENST00000449264 ZBTB11O95625 1053 aaPredicted RBP13.99□□□□□ -0.17
TNF-208ENST00000449264 GP1BAP07359 652 aa13.99□□□□□ -0.17
TNF-208ENST00000449264 AHRP35869 848 aa13.99□□□□□ -0.17
TNF-208ENST00000449264 PIK3CBP42338 1070 aa13.99□□□□□ -0.17
TNF-208ENST00000449264 ATP6AP1LQ52LC2 224 aa13.99□□□□□ -0.17
TNF-208ENST00000449264 FRMPD2BQ6IN97 320 aa13.99□□□□□ -0.17
TNF-208ENST00000449264 FBXO42Q6P3S6 717 aa13.99□□□□□ -0.17
TNF-208ENST00000449264 ZNF574Q6ZN55 896 aaPredicted RBP13.99□□□□□ -0.17
TNF-208ENST00000449264 RNF165Q6ZSG1 346 aa13.99□□□□□ -0.17
TNF-208ENST00000449264 Q6ZSR9 355 aa13.99□□□□□ -0.17
TNF-208ENST00000449264 RNF44Q7L0R7 432 aa13.99□□□□□ -0.17
TNF-208ENST00000449264 TRIM46Q7Z4K8 759 aa13.99□□□□□ -0.17
TNF-208ENST00000449264 HOMEZQ8IX15 550 aa13.99□□□□□ -0.17
TNF-208ENST00000449264 GBP7Q8N8V2 638 aaPredicted RBP13.99□□□□□ -0.17
TNF-208ENST00000449264 RERGQ96A58 199 aaPredicted RBP13.99□□□□□ -0.17
TNF-208ENST00000449264 TCTN2Q96GX1 697 aa13.99□□□□□ -0.17
TNF-208ENST00000449264 MARK4Q96L34 752 aa13.99□□□□□ -0.17
TNF-208ENST00000449264 CDC6Q99741 560 aa13.99□□□□□ -0.17
TNF-208ENST00000449264 SARGQ9BW04 601 aa13.99□□□□□ -0.17
TNF-208ENST00000449264 OR51B5Q9H339 312 aa13.99□□□□□ -0.17
TNF-208ENST00000449264 BRF2Q9HAW0 419 aa13.99□□□□□ -0.17
TNF-208ENST00000449264 PILRAQ9UKJ1 303 aa13.99□□□□□ -0.17
TNF-208ENST00000449264 G3BP2Q9UN86 482 aaKnown RBP13.99□□□□□ -0.17
TNF-208ENST00000449264 ARL2BPQ9Y2Y0 163 aa13.99□□□□□ -0.17
TNF-208ENST00000449264 DMXL1Q9Y485 3027 aa13.99□□□□□ -0.17
TNF-208ENST00000449264 PCNX2A6NKB5 2137 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 PTPRZ1P23471 2315 aaPredicted RBP13.98□□□□□ -0.17
TNF-208ENST00000449264 FOXE1O00358 373 aaPredicted RBP13.98□□□□□ -0.17
TNF-208ENST00000449264 LSM1O15116 133 aaKnown RBP13.98□□□□□ -0.17
TNF-208ENST00000449264 MAP3K7O43318 606 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 HCRTR1O43613 425 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 EIF2S1P05198 315 aaKnown RBP13.98□□□□□ -0.17
TNF-208ENST00000449264 HSD3B1P14060 373 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 HSD3B2P26439 372 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 SERPINB1P30740 379 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 RPL38P63173 70 aaKnown RBP13.98□□□□□ -0.17
TNF-208ENST00000449264 ZNF33BQ06732 778 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 KCNAB1Q14722 419 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 TERF2Q15554 542 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 PHF19Q5T6S3 580 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 TMEM198Q66K66 360 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 PRSS42Q7Z5A4 293 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 VN1R4Q7Z5H5 301 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 ASPGQ86U10 573 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 RCBTB1Q8NDN9 531 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 OR4D9Q8NGE8 314 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 ACTRT2Q8TDY3 377 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 CCDC74BQ96LY2 380 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 OR2A5Q96R48 311 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 C1orf50Q9BV19 199 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 MS4A8Q9BY19 250 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 LRTM1Q9HBL6 345 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 PDE7BQ9NP56 450 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 ADGRE2Q9UHX3 823 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 TSC22D4Q9Y3Q8 395 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 CCL27Q9Y4X3 112 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 AP1M2Q9Y6Q5 423 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 LOC105369274A0A096LPK9 316 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 LOC102723532A0A0G2JNH3 316 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 IGHV5-10-1A0A0J9YXX1 117 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 H0YGG7 62 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 P2RX6O15547 441 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 VPS4BO75351 444 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 CLEC3AO75596 197 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 RSL1D1O76021 490 aaKnown RBP13.98□□□□□ -0.17
TNF-208ENST00000449264 THRAP10827 490 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 VSX2P58304 361 aaPredicted RBP13.98□□□□□ -0.17
TNF-208ENST00000449264 ARF3P61204 181 aaPredicted RBP13.98□□□□□ -0.17
TNF-208ENST00000449264 HSD11B2P80365 405 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 GABPB1Q06547 395 aaPredicted RBP13.98□□□□□ -0.17
TNF-208ENST00000449264 SQSTM1Q13501 440 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 TUBB3Q13509 450 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 COL9A2Q14055 689 aaPredicted RBP13.98□□□□□ -0.17
TNF-208ENST00000449264 AP5B1Q2VPB7 878 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 LARP4Q71RC2 724 aaKnown RBP eCLIP13.98□□□□□ -0.17
TNF-208ENST00000449264 OR4N4Q8N0Y3 316 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 CARFQ8N187 725 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 ANKS4BQ8N8V4 417 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 FNDC5Q8NAU1 212 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 DEFB124Q8NES8 71 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 TRPV3Q8NET8 790 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 CEP70Q8NHQ1 597 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 CREB3L4Q8TEY5 395 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 SLC13A3Q8WWT9 602 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 N4BP2L2Q92802 583 aaPredicted RBP13.98□□□□□ -0.17
TNF-208ENST00000449264 CMTM7Q96FZ5 175 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 APIPQ96GX9 242 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 PPP3R2Q96LZ3 170 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 CATSPER2Q96P56 530 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 DPYSL5Q9BPU6 564 aa13.98□□□□□ -0.17
TNF-208ENST00000449264 CCDC28BQ9BUN5 200 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms