RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 SERPINI1Q99574 410 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 MAP3K3Q99759 626 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 DPYSL5Q9BPU6 564 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 ZFYVE21Q9BQ24 234 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 MS4A8Q9BY19 250 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 PARD6AQ9NPB6 346 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 NMRK1Q9NWW6 199 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 C1orf109Q9NX04 203 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 PDP2Q9P2J9 529 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 NCDNQ9UBB6 729 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 KLHL20Q9Y2M5 609 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 TOX3O15405 576 aaPredicted RBP18.44■□□□□ 0.54
RPS28-202ENST00000449223 PEX11AO75192 247 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 SEMA3DO95025 777 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 ETHE1O95571 254 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 ALDOCP09972 364 aaKnown RBP18.44■□□□□ 0.54
RPS28-202ENST00000449223 HOXB3P14651 431 aaPredicted RBP18.44■□□□□ 0.54
RPS28-202ENST00000449223 CKMT2P17540 419 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 CDH3P22223 829 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 ATP4BP51164 291 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 ARFIP1P53367 373 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 RPS13P62277 151 aaKnown RBP18.44■□□□□ 0.54
RPS28-202ENST00000449223 TBL3Q12788 808 aaKnown RBP18.44■□□□□ 0.54
RPS28-202ENST00000449223 DDX39BQ13838 428 aaKnown RBP18.44■□□□□ 0.54
RPS28-202ENST00000449223 ZIC1Q15915 447 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 AP5B1Q2VPB7 878 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 ADPRMQ3LIE5 342 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 PRSS42Q7Z5A4 293 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 FITM2Q8N6M3 262 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 TM4SF19Q96DZ7 209 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 TCTN2Q96GX1 697 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 CCDC3Q9BQI4 270 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 LRTM1Q9HBL6 345 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 SAR1AQ9NR31 198 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 RXFP3Q9NSD7 469 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 CPED1A4D0V7 1026 aa18.43■□□□□ 0.54
RPS28-202ENST00000449223 FCHO1O14526 889 aa18.43■□□□□ 0.54
RPS28-202ENST00000449223 UBDO15205 165 aa18.43■□□□□ 0.54
RPS28-202ENST00000449223 SLC22A2O15244 555 aa18.43■□□□□ 0.54
RPS28-202ENST00000449223 PVRP15151 417 aa18.43■□□□□ 0.54
RPS28-202ENST00000449223 ADSLP30566 484 aaPredicted RBP18.43■□□□□ 0.54
RPS28-202ENST00000449223 DAB2P98082 770 aa18.43■□□□□ 0.54
RPS28-202ENST00000449223 GSTA3Q16772 222 aa18.43■□□□□ 0.54
RPS28-202ENST00000449223 RFTN2Q52LD8 501 aaPredicted RBP18.43■□□□□ 0.54
RPS28-202ENST00000449223 SPIN4Q56A73 249 aa18.43■□□□□ 0.54
RPS28-202ENST00000449223 DEPDC1Q5TB30 811 aa18.43■□□□□ 0.54
RPS28-202ENST00000449223 TMEM198Q66K66 360 aa18.43■□□□□ 0.54
RPS28-202ENST00000449223 GALNT18Q6P9A2 607 aa18.43■□□□□ 0.54
RPS28-202ENST00000449223 PRR23CQ6ZRP0 262 aa18.43■□□□□ 0.54
RPS28-202ENST00000449223 TRPM8Q7Z2W7 1104 aa18.43■□□□□ 0.54
RPS28-202ENST00000449223 VN1R4Q7Z5H5 301 aa18.43■□□□□ 0.54
RPS28-202ENST00000449223 CLNKQ7Z7G1 428 aa18.43■□□□□ 0.54
RPS28-202ENST00000449223 PLD3Q8IV08 490 aa18.43■□□□□ 0.54
RPS28-202ENST00000449223 IFI44Q8TCB0 444 aa18.43■□□□□ 0.54
RPS28-202ENST00000449223 CHTF18Q8WVB6 975 aa18.43■□□□□ 0.54
RPS28-202ENST00000449223 TGM7Q96PF1 710 aa18.43■□□□□ 0.54
RPS28-202ENST00000449223 BRINP2Q9C0B6 783 aa18.43■□□□□ 0.54
RPS28-202ENST00000449223 SYNPO2LQ9H987 977 aa18.43■□□□□ 0.54
RPS28-202ENST00000449223 ENAMQ9NRM1 1142 aa18.43■□□□□ 0.54
RPS28-202ENST00000449223 FAM86C1Q9NVL1 165 aa18.43■□□□□ 0.54
RPS28-202ENST00000449223 SLC12A4Q9UP95 1085 aa18.43■□□□□ 0.54
RPS28-202ENST00000449223 A0A1W2PQM1 296 aa18.42■□□□□ 0.54
RPS28-202ENST00000449223 CBFA2T3O75081 653 aa18.42■□□□□ 0.54
RPS28-202ENST00000449223 CPNE6O95741 557 aa18.42■□□□□ 0.54
RPS28-202ENST00000449223 LDOC1O95751 146 aaPredicted RBP18.42■□□□□ 0.54
RPS28-202ENST00000449223 IDO1P14902 403 aa18.42■□□□□ 0.54
RPS28-202ENST00000449223 HYAL2Q12891 473 aa18.42■□□□□ 0.54
RPS28-202ENST00000449223 PWP1Q13610 501 aa18.42■□□□□ 0.54
RPS28-202ENST00000449223 GALNTL6Q49A17 601 aa18.42■□□□□ 0.54
RPS28-202ENST00000449223 KHDRBS2Q5VWX1 349 aaKnown RBP18.42■□□□□ 0.54
RPS28-202ENST00000449223 TMEM71Q6P5X7 295 aa18.42■□□□□ 0.54
RPS28-202ENST00000449223 FAM92BQ6ZTR7 304 aa18.42■□□□□ 0.54
RPS28-202ENST00000449223 KMT5CQ86Y97 462 aa18.42■□□□□ 0.54
RPS28-202ENST00000449223 Q8N9G6 341 aaPredicted RBP18.42■□□□□ 0.54
RPS28-202ENST00000449223 FNDC5Q8NAU1 212 aa18.42■□□□□ 0.54
RPS28-202ENST00000449223 NT5CQ8TCD5 201 aa18.42■□□□□ 0.54
RPS28-202ENST00000449223 CNDP2Q96KP4 475 aaKnown RBP18.42■□□□□ 0.54
RPS28-202ENST00000449223 AIG1Q9NVV5 245 aa18.42■□□□□ 0.54
RPS28-202ENST00000449223 NOP53Q9NZM5 478 aaKnown RBP18.42■□□□□ 0.54
RPS28-202ENST00000449223 GIMAP2Q9UG22 337 aa18.42■□□□□ 0.54
RPS28-202ENST00000449223 IGHV5-51A0A0C4DH38 117 aa18.41■□□□□ 0.54
RPS28-202ENST00000449223 LRIT2A6NDA9 550 aa18.41■□□□□ 0.54
RPS28-202ENST00000449223 SLC9B1P1A6NJY1 282 aa18.41■□□□□ 0.54
RPS28-202ENST00000449223 ZBTB11O95625 1053 aaPredicted RBP18.41■□□□□ 0.54
RPS28-202ENST00000449223 TGFB1P01137 390 aa18.41■□□□□ 0.54
RPS28-202ENST00000449223 ANKRD34CP0C6C1 535 aa18.41■□□□□ 0.54
RPS28-202ENST00000449223 MSL3P1P0C860 447 aa18.41■□□□□ 0.54
RPS28-202ENST00000449223 AMZ1Q400G9 498 aa18.41■□□□□ 0.54
RPS28-202ENST00000449223 TMEM35AQ53FP2 167 aa18.41■□□□□ 0.54
RPS28-202ENST00000449223 MANEAQ5SRI9 462 aa18.41■□□□□ 0.54
RPS28-202ENST00000449223 RHBDD1Q8TEB9 315 aa18.41■□□□□ 0.54
RPS28-202ENST00000449223 CCDC106Q9BWC9 280 aa18.41■□□□□ 0.54
RPS28-202ENST00000449223 SLC6A16Q9GZN6 736 aa18.41■□□□□ 0.54
RPS28-202ENST00000449223 LRRN3Q9H3W5 708 aa18.41■□□□□ 0.54
RPS28-202ENST00000449223 SDR39U1Q9NRG7 319 aaPredicted RBP18.41■□□□□ 0.54
RPS28-202ENST00000449223 TMEM45AQ9NWC5 275 aa18.41■□□□□ 0.54
RPS28-202ENST00000449223 GPR45Q9Y5Y3 372 aa18.41■□□□□ 0.54
RPS28-202ENST00000449223 COPG1Q9Y678 874 aaKnown RBP18.41■□□□□ 0.54
RPS28-202ENST00000449223 ADAMTS20P59510 1910 aa18.41■□□□□ 0.54
RPS28-202ENST00000449223 CCT8L1PA6NM43 557 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms