RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	MTG2	Q9H4K7	406 aa		16.31	■□□□□ 0.2
TOM1-210	ENST00000449058	SCN3B	Q9NY72	215 aa		16.31	■□□□□ 0.2
TOM1-210	ENST00000449058		J3QRK9	145 aa		16.31	■□□□□ 0.2
TOM1-210	ENST00000449058	CSF2RA	P15509	400 aa		16.31	■□□□□ 0.2
TOM1-210	ENST00000449058	SYN1	P17600	705 aa		16.31	■□□□□ 0.2
TOM1-210	ENST00000449058	NR4A1	P22736	598 aa		16.31	■□□□□ 0.2
TOM1-210	ENST00000449058	PDHA2	P29803	388 aa		16.31	■□□□□ 0.2
TOM1-210	ENST00000449058	ZNF77	Q15935	545 aa		16.31	■□□□□ 0.2
TOM1-210	ENST00000449058	C16orf87	Q6PH81	154 aa		16.31	■□□□□ 0.2
TOM1-210	ENST00000449058	LIPI	Q6XZB0	460 aa		16.31	■□□□□ 0.2
TOM1-210	ENST00000449058	ZNF554	Q86TJ5	538 aa		16.31	■□□□□ 0.2
TOM1-210	ENST00000449058	CCDC71	Q8IV32	467 aa	Predicted RBP	16.31	■□□□□ 0.2
TOM1-210	ENST00000449058	PARP8	Q8N3A8	854 aa		16.31	■□□□□ 0.2
TOM1-210	ENST00000449058	FBXO15	Q8NCQ5	510 aa	Predicted RBP	16.31	■□□□□ 0.2
TOM1-210	ENST00000449058	HCAR2	Q8TDS4	363 aa		16.31	■□□□□ 0.2
TOM1-210	ENST00000449058	RORB	Q92753	470 aa		16.31	■□□□□ 0.2
TOM1-210	ENST00000449058	NEIL2	Q969S2	332 aa		16.31	■□□□□ 0.2
TOM1-210	ENST00000449058	CXorf40B	Q96DE9	158 aa		16.31	■□□□□ 0.2
TOM1-210	ENST00000449058	YIPF6	Q96EC8	236 aa		16.31	■□□□□ 0.2
TOM1-210	ENST00000449058	KIF17	Q9P2E2	1029 aa		16.31	■□□□□ 0.2
TOM1-210	ENST00000449058	TBC1D14	Q9P2M4	693 aa		16.31	■□□□□ 0.2
TOM1-210	ENST00000449058	B3GNT3	Q9Y2A9	372 aa		16.31	■□□□□ 0.2
TOM1-210	ENST00000449058	NOTCH4	Q99466	2003 aa		16.31	■□□□□ 0.2
TOM1-210	ENST00000449058	MGAT4D	A6NG13	374 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	RNASET2	O00584	256 aa	Known RBP	16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	MRPS14	O60783	128 aa	Known RBP	16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	EFCAB14	O75071	495 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	SH3BGRL	O75368	114 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	GCM2	O75603	506 aa	Predicted RBP	16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	FGF19	O95750	216 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	CLTB	P09497	229 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	XPA	P23025	273 aa	Predicted RBP	16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	ITGB8	P26012	769 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	NNMT	P40261	264 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	MASP1	P48740	699 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	PNLIPRP1	P54315	467 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	RPS13	P62277	151 aa	Known RBP	16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	LRRC74A	Q0VAA2	488 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	SYT6	Q5T7P8	510 aa	Predicted RBP	16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	TMEM220	Q6QAJ8	160 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	NLRP8	Q86W28	1048 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	ATG16L2	Q8NAA4	619 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	KLHL23	Q8NBE8	558 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	AP2M1	Q96CW1	435 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	TPD52L3	Q96J77	140 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	LRIG1	Q96JA1	1093 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	COX4I2	Q96KJ9	171 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	FOPNL	Q96NB1	174 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	MYOC	Q99972	504 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	DNAAF2	Q9NVR5	837 aa	Known RBP	16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	ADPRHL2	Q9NX46	363 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	MARK1	Q9P0L2	795 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	GULP1	Q9UBP9	304 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	ATP6V1H	Q9UI12	483 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	VPS4A	Q9UN37	437 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	PADI2	Q9Y2J8	665 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	KCNE2	Q9Y6J6	123 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	SUV39H1	O43463	412 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	CBFA2T3	O75081	653 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	MAP2K4	P45985	399 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	NPRL3	Q12980	569 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	MED27	Q6P2C8	311 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	DCDC5	Q6ZRR9	648 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	TSEN54	Q7Z6J9	526 aa	Known RBP	16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	NRSN1	Q8IZ57	195 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	GPR156	Q8NFN8	814 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	WDR34	Q96EX3	536 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	SAMD11	Q96NU1	681 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	CCNB1IP1	Q9NPC3	277 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	ZNF282	Q9UDV7	671 aa	Predicted RBP	16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	DGKB	Q9Y6T7	804 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	KIAA1549L	Q6ZVL6	1849 aa		16.3	■□□□□ 0.2
TOM1-210	ENST00000449058	PCDH7	O60245	1069 aa		16.29	■□□□□ 0.2
TOM1-210	ENST00000449058	C1orf105	O95561	183 aa		16.29	■□□□□ 0.2
TOM1-210	ENST00000449058	ELFN1	P0C7U0	828 aa		16.29	■□□□□ 0.2
TOM1-210	ENST00000449058	VASP	P50552	380 aa	Predicted RBP	16.29	■□□□□ 0.2
TOM1-210	ENST00000449058	MVD	P53602	400 aa		16.29	■□□□□ 0.2
TOM1-210	ENST00000449058	SMN1	Q16637	294 aa	Known RBP	16.29	■□□□□ 0.2
TOM1-210	ENST00000449058	ZNF385B	Q569K4	471 aa		16.29	■□□□□ 0.2
TOM1-210	ENST00000449058	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	16.29	■□□□□ 0.2
TOM1-210	ENST00000449058	NAGS	Q8N159	534 aa		16.29	■□□□□ 0.2
TOM1-210	ENST00000449058	C11orf65	Q8NCR3	313 aa		16.29	■□□□□ 0.2
TOM1-210	ENST00000449058	GOT1L1	Q8NHS2	421 aa	Predicted RBP	16.29	■□□□□ 0.2
TOM1-210	ENST00000449058	CHPT1	Q8WUD6	406 aa		16.29	■□□□□ 0.2
TOM1-210	ENST00000449058	ZNF480	Q8WV37	535 aa		16.29	■□□□□ 0.2
TOM1-210	ENST00000449058	MAL2	Q969L2	176 aa		16.29	■□□□□ 0.2
TOM1-210	ENST00000449058	SIGLEC11	Q96RL6	698 aa		16.29	■□□□□ 0.2
TOM1-210	ENST00000449058	DOHH	Q9BU89	302 aa		16.29	■□□□□ 0.2
TOM1-210	ENST00000449058	GABARAPL3	Q9BY60	117 aa		16.29	■□□□□ 0.2
TOM1-210	ENST00000449058	BHLHE41	Q9C0J9	482 aa	Predicted RBP	16.29	■□□□□ 0.2
TOM1-210	ENST00000449058	EPHX3	Q9H6B9	360 aa		16.29	■□□□□ 0.2
TOM1-210	ENST00000449058	TDRKH	Q9Y2W6	561 aa	Known RBP	16.29	■□□□□ 0.2
TOM1-210	ENST00000449058	PCDHGB3	Q9Y5G1	929 aa		16.29	■□□□□ 0.2
TOM1-210	ENST00000449058	LRRK1	Q38SD2	2015 aa		16.29	■□□□□ 0.2
TOM1-210	ENST00000449058	GNG14	A0A1W2PPG7	69 aa		16.29	■□□□□ 0.2
TOM1-210	ENST00000449058	SLC22A1	O15245	554 aa		16.29	■□□□□ 0.2
TOM1-210	ENST00000449058	MAN1A2	O60476	641 aa		16.29	■□□□□ 0.2
TOM1-210	ENST00000449058	WBP4	O75554	376 aa	Known RBP	16.29	■□□□□ 0.2
TOM1-210	ENST00000449058	SULT1C4	O75897	302 aa		16.29	■□□□□ 0.2

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms