RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 RAB28P51157 221 aa18.12■□□□□ 0.49
SEMA3D-202ENST00000444867 MEF2AQ02078 507 aaPredicted RBP18.12■□□□□ 0.49
SEMA3D-202ENST00000444867 CHRNB3Q05901 458 aa18.12■□□□□ 0.49
SEMA3D-202ENST00000444867 SF1Q15637 639 aaKnown RBP18.12■□□□□ 0.49
SEMA3D-202ENST00000444867 TMTC4Q5T4D3 741 aa18.12■□□□□ 0.49
SEMA3D-202ENST00000444867 DUS1LQ6P1R4 473 aaKnown RBP18.12■□□□□ 0.49
SEMA3D-202ENST00000444867 KIAA1324Q6UXG2 1013 aaKnown RBP18.12■□□□□ 0.49
SEMA3D-202ENST00000444867 IKBIPQ70UQ0 350 aa18.12■□□□□ 0.49
SEMA3D-202ENST00000444867 PHACTR4Q8IZ21 702 aa18.12■□□□□ 0.49
SEMA3D-202ENST00000444867 OR4K1Q8NGD4 311 aa18.12■□□□□ 0.49
SEMA3D-202ENST00000444867 OR2L8Q8NGY9 312 aa18.12■□□□□ 0.49
SEMA3D-202ENST00000444867 RPLP0P6Q8NHW5 317 aa18.12■□□□□ 0.49
SEMA3D-202ENST00000444867 SNX19Q92543 992 aa18.12■□□□□ 0.49
SEMA3D-202ENST00000444867 FIG4Q92562 907 aa18.12■□□□□ 0.49
SEMA3D-202ENST00000444867 MIEF2Q96C03 454 aa18.12■□□□□ 0.49
SEMA3D-202ENST00000444867 OR2M4Q96R27 311 aa18.12■□□□□ 0.49
SEMA3D-202ENST00000444867 SPATA9Q9BWV2 254 aa18.12■□□□□ 0.49
SEMA3D-202ENST00000444867 OLAHQ9NV23 265 aa18.12■□□□□ 0.49
SEMA3D-202ENST00000444867 ATAD3AQ9NVI7 634 aa18.12■□□□□ 0.49
SEMA3D-202ENST00000444867 MOSPD1Q9UJG1 213 aa18.12■□□□□ 0.49
SEMA3D-202ENST00000444867 MMP17Q9ULZ9 603 aa18.12■□□□□ 0.49
SEMA3D-202ENST00000444867 F5P12259 2224 aa18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 PRSS38A1L453 326 aa18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 ANKDD1BA6NHY2 528 aa18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 LRRC72A6NJI9 287 aa18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 CLIC1O00299 241 aa18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 RNASET2O00584 256 aaKnown RBP18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 TPST1O60507 370 aa18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 SH3BGRLO75368 114 aa18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 NDUFV2P19404 249 aa18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 PKLRP30613 574 aa18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 NFATC4Q14934 902 aa18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 RBBP5Q15291 538 aaKnown RBP18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 ERICH5Q6P6B1 374 aa18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 VN1R5Q7Z5H4 357 aa18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 SPRED1Q7Z699 444 aa18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 FAM124AQ86V42 546 aa18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 C2orf73Q8N5S3 287 aaPredicted RBP18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 ZNF740Q8NDX6 193 aa18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 FAM162AQ96A26 154 aa18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 SEPHS2Q99611 448 aa18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 TBCDQ9BTW9 1192 aa18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 BDH2Q9BUT1 245 aa18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 ACAT2Q9BWD1 397 aa18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 CHID1Q9BWS9 393 aa18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 OR51B5Q9H339 312 aa18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 IMP3Q9NV31 184 aaKnown RBP18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 PDP2Q9P2J9 529 aa18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 CORO2BQ9UQ03 480 aa18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 WBP11Q9Y2W2 641 aaKnown RBP18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 PCDHB11Q9Y5F2 797 aa18.11■□□□□ 0.49
SEMA3D-202ENST00000444867 REV3LO60673 3130 aa18.1■□□□□ 0.49
SEMA3D-202ENST00000444867 APBB3O95704 486 aa18.1■□□□□ 0.49
SEMA3D-202ENST00000444867 GPX2P18283 190 aa18.1■□□□□ 0.49
SEMA3D-202ENST00000444867 CHN2P52757 468 aa18.1■□□□□ 0.49
SEMA3D-202ENST00000444867 PDE7AQ13946 482 aa18.1■□□□□ 0.49
SEMA3D-202ENST00000444867 KRT33BQ14525 404 aa18.1■□□□□ 0.49
SEMA3D-202ENST00000444867 UGT2A3Q6UWM9 527 aa18.1■□□□□ 0.49
SEMA3D-202ENST00000444867 SLC9B2Q86UD5 537 aa18.1■□□□□ 0.49
SEMA3D-202ENST00000444867 MFSD2AQ8NA29 543 aa18.1■□□□□ 0.49
SEMA3D-202ENST00000444867 C16orf78Q8WTQ4 265 aa18.1■□□□□ 0.49
SEMA3D-202ENST00000444867 AURKBQ96GD4 344 aaPredicted RBP18.1■□□□□ 0.49
SEMA3D-202ENST00000444867 RNF145Q96MT1 663 aa18.1■□□□□ 0.49
SEMA3D-202ENST00000444867 SLC29A1Q99808 456 aa18.1■□□□□ 0.49
SEMA3D-202ENST00000444867 CENPKQ9BS16 269 aa18.1■□□□□ 0.49
SEMA3D-202ENST00000444867 FGF22Q9HCT0 170 aa18.1■□□□□ 0.49
SEMA3D-202ENST00000444867 DLGAP2Q9P1A6 1054 aa18.1■□□□□ 0.49
SEMA3D-202ENST00000444867 LIMD1Q9UGP4 676 aa18.1■□□□□ 0.49
SEMA3D-202ENST00000444867 BTBD3Q9Y2F9 522 aa18.1■□□□□ 0.49
SEMA3D-202ENST00000444867 SAC3D1A6NKF1 404 aa18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 PDZK1P1A8MUH7 402 aa18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 H3BQ06 376 aaPredicted RBP18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 DEAF1O75398 565 aaPredicted RBP18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 CREG1O75629 220 aa18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 CPSF4O95639 269 aaKnown RBP18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 B3GALT4O96024 378 aa18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 CKMT2P17540 419 aa18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 HNRNPA2B1P22626 353 aaKnown RBP18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 SMAD4Q13485 552 aaKnown RBP18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 CCINQ13939 588 aa18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 CLCA4Q14CN2 919 aa18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 NRF1Q16656 503 aa18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 FAM71E1Q6IPT2 247 aa18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 TMEM92Q6UXU6 159 aa18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 ZNF621Q6ZSS3 439 aa18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 GPR155Q7Z3F1 870 aa18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 PGBD3Q8N328 593 aa18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 DEFB123Q8N688 67 aa18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 LINC01555Q8NAE3 123 aa18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 WDR48Q8TAF3 677 aa18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 WDR92Q96MX6 357 aa18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 MS4A8Q9BY19 250 aa18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 MAGIXQ9H6Y5 334 aa18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 CARS2Q9HA77 564 aaKnown RBP18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 DCAF13Q9NV06 445 aaKnown RBP18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 CUEDC1Q9NWM3 386 aaPredicted RBP18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 ZNF282Q9UDV7 671 aaPredicted RBP18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 PLEKHM1Q9Y4G2 1056 aa18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 C7orf72A4D263 438 aa18.09■□□□□ 0.49
SEMA3D-202ENST00000444867 EIF4E1BA6NMX2 242 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms