RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 SOX3P41225 446 aa11.25□□□□□ -0.61
HCFC1-203ENST00000444191 RPS13P62277 151 aaKnown RBP11.25□□□□□ -0.61
HCFC1-203ENST00000444191 SNRPD1P62314 119 aaKnown RBP11.25□□□□□ -0.61
HCFC1-203ENST00000444191 IL18R1Q13478 541 aa11.25□□□□□ -0.61
HCFC1-203ENST00000444191 ZC3H12BQ5HYM0 836 aaKnown RBP11.25□□□□□ -0.61
HCFC1-203ENST00000444191 TJAP1Q5JTD0 557 aa11.25□□□□□ -0.61
HCFC1-203ENST00000444191 AFMIDQ63HM1 303 aa11.25□□□□□ -0.61
HCFC1-203ENST00000444191 SHQ1Q6PI26 577 aaKnown RBP11.25□□□□□ -0.61
HCFC1-203ENST00000444191 TMPRSS11AQ6ZMR5 421 aa11.25□□□□□ -0.61
HCFC1-203ENST00000444191 USP43Q70EL4 1123 aa11.25□□□□□ -0.61
HCFC1-203ENST00000444191 MSRB3Q8IXL7 192 aa11.25□□□□□ -0.61
HCFC1-203ENST00000444191 CFAP206Q8IYR0 622 aa11.25□□□□□ -0.61
HCFC1-203ENST00000444191 TRPV1Q8NER1 839 aa11.25□□□□□ -0.61
HCFC1-203ENST00000444191 CSGALNACT1Q8TDX6 532 aa11.25□□□□□ -0.61
HCFC1-203ENST00000444191 CLP1Q92989 425 aaKnown RBP11.25□□□□□ -0.61
HCFC1-203ENST00000444191 RDH12Q96NR8 316 aa11.25□□□□□ -0.61
HCFC1-203ENST00000444191 NECTIN4Q96NY8 510 aa11.25□□□□□ -0.61
HCFC1-203ENST00000444191 SYT17Q9BSW7 474 aa11.25□□□□□ -0.61
HCFC1-203ENST00000444191 MROQ9BYG7 248 aa11.25□□□□□ -0.61
HCFC1-203ENST00000444191 RLIMQ9NVW2 624 aa11.25□□□□□ -0.61
HCFC1-203ENST00000444191 MRPS7Q9Y2R9 242 aaKnown RBP11.25□□□□□ -0.61
HCFC1-203ENST00000444191 DYRK1BQ9Y463 629 aa11.25□□□□□ -0.61
HCFC1-203ENST00000444191 OARD1Q9Y530 152 aa11.25□□□□□ -0.61
HCFC1-203ENST00000444191 KCNE2Q9Y6J6 123 aa11.25□□□□□ -0.61
HCFC1-203ENST00000444191 ZNF840PA6NDX5 716 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 DRGXA6NNA5 263 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 FAM25AB3EWG3 89 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 FAM25CB3EWG5 89 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 FAM25GB3EWG6 89 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 CCR7P32248 378 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 EPHB3P54753 998 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 C1DQ13901 141 aaKnown RBP11.24□□□□□ -0.61
HCFC1-203ENST00000444191 SMUG1Q53HV7 270 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 GPRC6AQ5T6X5 926 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 HIST2H2AA3Q6FI13 130 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 KLHL17Q6TDP4 642 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 RNF130Q86XS8 419 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 VRK3Q8IV63 474 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 ZZZ3Q8IYH5 903 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 CELF5Q8N6W0 485 aaKnown RBP11.24□□□□□ -0.61
HCFC1-203ENST00000444191 ZFP41Q8N8Y5 198 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 SORCS1Q8WY21 1168 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 P2RY13Q9BPV8 354 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 OSGEPL1Q9H4B0 414 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 CLMPQ9H6B4 373 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 FNIP2Q9P278 1114 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 PPT2Q9UMR5 302 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 LYVE1Q9Y5Y7 322 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 GSAPA4D1B5 854 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 GLTPD2A6NH11 291 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 WWP2O00308 870 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 CCRL2O00421 344 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 ERAL1O75616 437 aaKnown RBP11.24□□□□□ -0.61
HCFC1-203ENST00000444191 KLK1P06870 262 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 ATF6P18850 670 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 CTSOP43234 321 aaPredicted RBP11.24□□□□□ -0.61
HCFC1-203ENST00000444191 CSRP3P50461 194 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 PPIGQ13427 754 aaKnown RBP eCLIP11.24□□□□□ -0.61
HCFC1-203ENST00000444191 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.24□□□□□ -0.61
HCFC1-203ENST00000444191 PRSS36Q5K4E3 855 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 LIPKQ5VXJ0 399 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 GTF2IRD2BQ6EKJ0 949 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 NEK5Q6P3R8 708 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 BCDIN3DQ7Z5W3 292 aaKnown RBP11.24□□□□□ -0.61
HCFC1-203ENST00000444191 DNAJB7Q7Z6W7 309 aaPredicted RBP11.24□□□□□ -0.61
HCFC1-203ENST00000444191 GTF2IRD2Q86UP8 949 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 C19orf18Q8NEA5 215 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 PEX13Q92968 403 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 EXOSC8Q96B26 276 aaKnown RBP11.24□□□□□ -0.61
HCFC1-203ENST00000444191 MGLLQ99685 303 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 CCM2Q9BSQ5 444 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 IL1RAPQ9NPH3 570 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 RPRD1BQ9NQG5 326 aaKnown RBP11.24□□□□□ -0.61
HCFC1-203ENST00000444191 NECTIN3Q9NQS3 549 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 ATP6V1HQ9UI12 483 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 E7EQ34 232 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 SYN3O14994 580 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 LZTS3O60299 673 aaPredicted RBP11.24□□□□□ -0.61
HCFC1-203ENST00000444191 NAT1P18440 290 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 ACRV1P26436 265 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 TGM4P49221 684 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 SUOXP51687 545 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 CLCN4P51793 760 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 SRSF11Q05519 484 aaKnown RBP11.24□□□□□ -0.61
HCFC1-203ENST00000444191 SCARB2Q14108 478 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 IFI44LQ53G44 452 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 RTN4RL1Q86UN2 441 aaPredicted RBP11.24□□□□□ -0.61
HCFC1-203ENST00000444191 DEPDC4Q8N2C3 294 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 LILRA3Q8N6C8 439 aaPredicted RBP11.24□□□□□ -0.61
HCFC1-203ENST00000444191 PAPD5Q8NDF8 572 aaKnown RBP11.24□□□□□ -0.61
HCFC1-203ENST00000444191 ASZ1Q8WWH4 475 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 FAM129BQ96TA1 746 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 HDHD2Q9H0R4 259 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 MMP28Q9H239 520 aa11.24□□□□□ -0.61
HCFC1-203ENST00000444191 CCDC182A6NF36 153 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 RTCAO00442 366 aaKnown RBP11.23□□□□□ -0.61
HCFC1-203ENST00000444191 GFRA2O00451 464 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 WNT9AO14904 365 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 SEPT4O43236 478 aa11.23□□□□□ -0.61
HCFC1-203ENST00000444191 CH25HO95992 272 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms