RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 BEST4Q8NFU0 473 aa7.29□□□□□ -1.24
HDAC9-214ENST00000441542 SCAMP5Q8TAC9 235 aa7.29□□□□□ -1.24
HDAC9-214ENST00000441542 TNIP3Q96KP6 325 aa7.29□□□□□ -1.24
HDAC9-214ENST00000441542 SEMA3CQ99985 751 aa7.29□□□□□ -1.24
HDAC9-214ENST00000441542 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.29□□□□□ -1.24
HDAC9-214ENST00000441542 NSUN3Q9H649 340 aaKnown RBP7.29□□□□□ -1.24
HDAC9-214ENST00000441542 GORASP2Q9H8Y8 452 aa7.29□□□□□ -1.24
HDAC9-214ENST00000441542 AGO3Q9H9G7 860 aaKnown RBP7.29□□□□□ -1.24
HDAC9-214ENST00000441542 NPAP1Q9NZP6 1156 aa7.29□□□□□ -1.24
HDAC9-214ENST00000441542 GTF2IRD1Q9UHL9 959 aa7.29□□□□□ -1.24
HDAC9-214ENST00000441542 PSORS1C1Q9UIG5 152 aa7.29□□□□□ -1.24
HDAC9-214ENST00000441542 NDRG4Q9ULP0 352 aaKnown RBP7.29□□□□□ -1.24
HDAC9-214ENST00000441542 NDRG2Q9UN36 371 aaKnown RBP7.29□□□□□ -1.24
HDAC9-214ENST00000441542 CMAHPQ9Y471 501 aa7.29□□□□□ -1.24
HDAC9-214ENST00000441542 RFXANKO14593 260 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 KERAO60938 352 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 ADAMTS4O75173 837 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 NCR1O76036 304 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 SLC22A5O76082 557 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 HAPLN1P10915 354 aaPredicted RBP7.28□□□□□ -1.24
HDAC9-214ENST00000441542 SLC2A2P11168 524 aaPredicted RBP7.28□□□□□ -1.24
HDAC9-214ENST00000441542 NAGAP17050 411 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 FDXRP22570 491 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 MAGEA11P43364 429 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 MAP2K3P46734 347 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 ARHGDIBP52566 201 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 DAOAP59103 153 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 SPIBQ01892 262 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 CSTF3Q12996 717 aaKnown RBP7.28□□□□□ -1.24
HDAC9-214ENST00000441542 TOR1AIP1Q5JTV8 583 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 SDHAF4Q5VUM1 108 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 METTL11BQ5VVY1 283 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 KDM4DQ6B0I6 523 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 LAMTOR1Q6IAA8 161 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 TIGD7Q6NT04 549 aaPredicted RBP7.28□□□□□ -1.24
HDAC9-214ENST00000441542 BHLHB9Q6PI77 547 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 KDELC1Q6UW63 502 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 SUSD1Q6UWL2 747 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 ADAMTSL2Q86TH1 951 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 SPATA2LQ8IUW3 424 aaPredicted RBP7.28□□□□□ -1.24
HDAC9-214ENST00000441542 LPCAT1Q8NF37 534 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 OR4K2Q8NGD2 314 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 USP7Q93009 1102 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 PSMG2Q969U7 264 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 ZNF566Q969W8 418 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 C1GALT1C1Q96EU7 318 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 COL21A1Q96P44 957 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 GPR20Q99678 358 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 SRRQ9GZT4 340 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 SPATA6Q9NWH7 488 aaPredicted RBP7.28□□□□□ -1.24
HDAC9-214ENST00000441542 PPIEQ9UNP9 301 aaKnown RBP7.28□□□□□ -1.24
HDAC9-214ENST00000441542 V9GYH0 126 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 SCN1AP35498 2009 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 TNFRSF11BO00300 401 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 WNT10BO00744 389 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 KPNA5O15131 536 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 MATN3O15232 486 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 APBB3O95704 486 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 ACPPP15309 386 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 ITGALP20701 1170 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 TACR1P25103 407 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 NNMTP40261 264 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 HCAR3P49019 387 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 RORCP51449 518 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 SOX4Q06945 474 aaPredicted RBP7.28□□□□□ -1.24
HDAC9-214ENST00000441542 MAB21L1Q13394 359 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 IHHQ14623 411 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 FCN2Q15485 313 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 ZSWIM7Q19AV6 140 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 BCL2L15Q5TBC7 163 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 LCN1P1Q5VSP4 162 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 MARC1Q5VT66 337 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 DLK2Q6UY11 383 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 PTCHD4Q6ZW05 846 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 ZNF767PQ75MW2 155 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 GPR149Q86SP6 731 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 ZNF598Q86UK7 904 aaKnown RBP7.28□□□□□ -1.24
HDAC9-214ENST00000441542 OR8J3Q8NGG0 315 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 OR4L1Q8NH43 312 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 MARC2Q969Z3 335 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 HMCESQ96FZ2 354 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 METTL2AQ96IZ6 378 aaKnown RBP7.28□□□□□ -1.24
HDAC9-214ENST00000441542 ZFP42Q96MM3 310 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 QRFPRQ96P65 431 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 NIPSNAP1Q9BPW8 284 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 POLR2J2Q9GZM3 115 aaKnown RBP7.28□□□□□ -1.24
HDAC9-214ENST00000441542 ZNF556Q9HAH1 456 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 ATPIF1Q9UII2 106 aa7.28□□□□□ -1.24
HDAC9-214ENST00000441542 LOC105369274A0A096LPK9 316 aa7.27□□□□□ -1.24
HDAC9-214ENST00000441542 SOWAHBA6NEL2 793 aa7.27□□□□□ -1.24
HDAC9-214ENST00000441542 GTPBP1O00178 669 aaKnown RBP7.27□□□□□ -1.24
HDAC9-214ENST00000441542 LGALS8O00214 317 aa7.27□□□□□ -1.24
HDAC9-214ENST00000441542 MYL12BO14950 172 aa7.27□□□□□ -1.24
HDAC9-214ENST00000441542 GPR182O15218 404 aa7.27□□□□□ -1.24
HDAC9-214ENST00000441542 PLA2G10O15496 165 aa7.27□□□□□ -1.24
HDAC9-214ENST00000441542 PRMT3O60678 531 aa7.27□□□□□ -1.24
HDAC9-214ENST00000441542 UGT2B17O75795 530 aa7.27□□□□□ -1.24
HDAC9-214ENST00000441542 PROS1P07225 676 aa7.27□□□□□ -1.24
HDAC9-214ENST00000441542 IGFBP1P08833 259 aaPredicted RBP7.27□□□□□ -1.24
HDAC9-214ENST00000441542 MYL12AP19105 171 aa7.27□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms