RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 PPP1R32Q7Z5V6 425 aa17.33■□□□□ 0.36
SMPD4-210ENST00000441135 UBTD2Q8WUN7 234 aa17.33■□□□□ 0.36
SMPD4-210ENST00000441135 NEIL2Q969S2 332 aa17.33■□□□□ 0.36
SMPD4-210ENST00000441135 ALKBH8Q96BT7 664 aaKnown RBP17.33■□□□□ 0.36
SMPD4-210ENST00000441135 C10orf90Q96M02 699 aa17.33■□□□□ 0.36
SMPD4-210ENST00000441135 NUDT9Q9BW91 350 aa17.33■□□□□ 0.36
SMPD4-210ENST00000441135 ALG9Q9H6U8 611 aa17.33■□□□□ 0.36
SMPD4-210ENST00000441135 SYNPO2LQ9H987 977 aa17.33■□□□□ 0.36
SMPD4-210ENST00000441135 PPCSQ9HAB8 311 aa17.33■□□□□ 0.36
SMPD4-210ENST00000441135 WWOXQ9NZC7 414 aa17.33■□□□□ 0.36
SMPD4-210ENST00000441135 CDC14AQ9UNH5 594 aa17.33■□□□□ 0.36
SMPD4-210ENST00000441135 RUVBL1Q9Y265 456 aaKnown RBP17.33■□□□□ 0.36
SMPD4-210ENST00000441135 SLC22A14Q9Y267 594 aa17.33■□□□□ 0.36
SMPD4-210ENST00000441135 A6NL46 340 aa17.32■□□□□ 0.36
SMPD4-210ENST00000441135 POC1B-GALNT4F8VUJ3 575 aa17.32■□□□□ 0.36
SMPD4-210ENST00000441135 PRPF4O43172 522 aaKnown RBP eCLIP17.32■□□□□ 0.36
SMPD4-210ENST00000441135 ALPPP05187 535 aa17.32■□□□□ 0.36
SMPD4-210ENST00000441135 EIF2S1P05198 315 aaKnown RBP17.32■□□□□ 0.36
SMPD4-210ENST00000441135 SNRPAP09012 282 aaKnown RBP17.32■□□□□ 0.36
SMPD4-210ENST00000441135 GNAZP19086 355 aa17.32■□□□□ 0.36
SMPD4-210ENST00000441135 MMP11P24347 488 aa17.32■□□□□ 0.36
SMPD4-210ENST00000441135 REEP5Q00765 189 aa17.32■□□□□ 0.36
SMPD4-210ENST00000441135 SLC29A2Q14542 456 aa17.32■□□□□ 0.36
SMPD4-210ENST00000441135 IGFBP7Q16270 282 aa17.32■□□□□ 0.36
SMPD4-210ENST00000441135 NDUFA9Q16795 377 aa17.32■□□□□ 0.36
SMPD4-210ENST00000441135 TIFABQ6ZNK6 161 aa17.32■□□□□ 0.36
SMPD4-210ENST00000441135 COX15Q7KZN9 410 aa17.32■□□□□ 0.36
SMPD4-210ENST00000441135 VN1R4Q7Z5H5 301 aa17.32■□□□□ 0.36
SMPD4-210ENST00000441135 ATCAYQ86WG3 371 aa17.32■□□□□ 0.36
SMPD4-210ENST00000441135 MFSD9Q8NBP5 474 aa17.32■□□□□ 0.36
SMPD4-210ENST00000441135 CAMKVQ8NCB2 501 aa17.32■□□□□ 0.36
SMPD4-210ENST00000441135 KCTD4Q8WVF5 259 aa17.32■□□□□ 0.36
SMPD4-210ENST00000441135 MIB2Q96AX9 1013 aa17.32■□□□□ 0.36
SMPD4-210ENST00000441135 NXNL1Q96CM4 212 aa17.32■□□□□ 0.36
SMPD4-210ENST00000441135 TM4SF19Q96DZ7 209 aa17.32■□□□□ 0.36
SMPD4-210ENST00000441135 CABS1Q96KC9 395 aa17.32■□□□□ 0.36
SMPD4-210ENST00000441135 GPR78Q96P69 363 aa17.32■□□□□ 0.36
SMPD4-210ENST00000441135 SMAD5Q99717 465 aaKnown RBP17.32■□□□□ 0.36
SMPD4-210ENST00000441135 TMEM79Q9BSE2 394 aa17.32■□□□□ 0.36
SMPD4-210ENST00000441135 UNKQ9C0B0 810 aaKnown RBP17.32■□□□□ 0.36
SMPD4-210ENST00000441135 PITHD1Q9GZP4 211 aaPredicted RBP17.32■□□□□ 0.36
SMPD4-210ENST00000441135 EHD1Q9H4M9 534 aa17.32■□□□□ 0.36
SMPD4-210ENST00000441135 CD274Q9NZQ7 290 aa17.32■□□□□ 0.36
SMPD4-210ENST00000441135 C5AR2Q9P296 337 aa17.32■□□□□ 0.36
SMPD4-210ENST00000441135 TTLL8A6PVC2 850 aa17.31■□□□□ 0.36
SMPD4-210ENST00000441135 AGPSO00116 658 aa17.31■□□□□ 0.36
SMPD4-210ENST00000441135 TAPBPO15533 448 aa17.31■□□□□ 0.36
SMPD4-210ENST00000441135 STK16O75716 305 aa17.31■□□□□ 0.36
SMPD4-210ENST00000441135 WDR47O94967 919 aa17.31■□□□□ 0.36
SMPD4-210ENST00000441135 GSTM2P28161 218 aa17.31■□□□□ 0.36
SMPD4-210ENST00000441135 GCAP28676 217 aa17.31■□□□□ 0.36
SMPD4-210ENST00000441135 AHRP35869 848 aa17.31■□□□□ 0.36
SMPD4-210ENST00000441135 BCL6P41182 706 aa17.31■□□□□ 0.36
SMPD4-210ENST00000441135 CD97P48960 835 aa17.31■□□□□ 0.36
SMPD4-210ENST00000441135 CDC16Q13042 620 aa17.31■□□□□ 0.36
SMPD4-210ENST00000441135 NKG7Q16617 165 aa17.31■□□□□ 0.36
SMPD4-210ENST00000441135 TSNAXIP1Q2TAA8 658 aa17.31■□□□□ 0.36
SMPD4-210ENST00000441135 NADK2Q4G0N4 442 aa17.31■□□□□ 0.36
SMPD4-210ENST00000441135 METTL2BQ6P1Q9 378 aaKnown RBP17.31■□□□□ 0.36
SMPD4-210ENST00000441135 NXPE4Q6UWF7 544 aa17.31■□□□□ 0.36
SMPD4-210ENST00000441135 LRRC70Q7Z2Q7 622 aa17.31■□□□□ 0.36
SMPD4-210ENST00000441135 LCA5Q86VQ0 697 aa17.31■□□□□ 0.36
SMPD4-210ENST00000441135 GSPT2Q8IYD1 628 aaKnown RBP17.31■□□□□ 0.36
SMPD4-210ENST00000441135 UHMK1Q8TAS1 419 aaKnown RBP17.31■□□□□ 0.36
SMPD4-210ENST00000441135 SEC16BQ96JE7 1060 aa17.31■□□□□ 0.36
SMPD4-210ENST00000441135 VPS50Q96JG6 964 aa17.31■□□□□ 0.36
SMPD4-210ENST00000441135 SPSB2Q99619 263 aa17.31■□□□□ 0.36
SMPD4-210ENST00000441135 AIF1LQ9BQI0 150 aa17.31■□□□□ 0.36
SMPD4-210ENST00000441135 CCDC77Q9BR77 488 aa17.31■□□□□ 0.36
SMPD4-210ENST00000441135 DNAJC11Q9NVH1 559 aa17.31■□□□□ 0.36
SMPD4-210ENST00000441135 COPG2Q9UBF2 871 aa17.31■□□□□ 0.36
SMPD4-210ENST00000441135 CTSFQ9UBX1 484 aa17.31■□□□□ 0.36
SMPD4-210ENST00000441135 PLAAQ9Y263 795 aa17.31■□□□□ 0.36
SMPD4-210ENST00000441135 NBASA2RRP1 2371 aa17.3■□□□□ 0.36
SMPD4-210ENST00000441135 NCF1BA6NI72 391 aaPredicted RBP17.3■□□□□ 0.36
SMPD4-210ENST00000441135 NCF1CA8MVU1 366 aaPredicted RBP17.3■□□□□ 0.36
SMPD4-210ENST00000441135 TRIM49D1C9J1S8 452 aa17.3■□□□□ 0.36
SMPD4-210ENST00000441135 KLK8O60259 260 aa17.3■□□□□ 0.36
SMPD4-210ENST00000441135 SORBS2O94875 1100 aaKnown RBP17.3■□□□□ 0.36
SMPD4-210ENST00000441135 MTHFD2P13995 350 aa17.3■□□□□ 0.36
SMPD4-210ENST00000441135 NCF1P14598 390 aaPredicted RBP17.3■□□□□ 0.36
SMPD4-210ENST00000441135 CXCR2P25025 360 aa17.3■□□□□ 0.36
SMPD4-210ENST00000441135 OR1D4P47884 311 aa17.3■□□□□ 0.36
SMPD4-210ENST00000441135 KCNC1P48547 511 aa17.3■□□□□ 0.36
SMPD4-210ENST00000441135 MLLT10P55197 1068 aa17.3■□□□□ 0.36
SMPD4-210ENST00000441135 SOX8P57073 446 aa17.3■□□□□ 0.36
SMPD4-210ENST00000441135 FOXL2P58012 376 aa17.3■□□□□ 0.36
SMPD4-210ENST00000441135 IRF9Q00978 393 aa17.3■□□□□ 0.36
SMPD4-210ENST00000441135 PCDH1Q08174 1060 aa17.3■□□□□ 0.36
SMPD4-210ENST00000441135 PWP1Q13610 501 aa17.3■□□□□ 0.36
SMPD4-210ENST00000441135 DSG2Q14126 1118 aa17.3■□□□□ 0.36
SMPD4-210ENST00000441135 MYBPC3Q14896 1274 aa17.3■□□□□ 0.36
SMPD4-210ENST00000441135 RASA2Q15283 850 aa17.3■□□□□ 0.36
SMPD4-210ENST00000441135 HKDC1Q2TB90 917 aa17.3■□□□□ 0.36
SMPD4-210ENST00000441135 WDR93Q6P2C0 686 aa17.3■□□□□ 0.36
SMPD4-210ENST00000441135 TMPRSS11BQ86T26 416 aa17.3■□□□□ 0.36
SMPD4-210ENST00000441135 ASPGQ86U10 573 aa17.3■□□□□ 0.36
SMPD4-210ENST00000441135 PLD3Q8IV08 490 aa17.3■□□□□ 0.36
SMPD4-210ENST00000441135 GALNT16Q8N428 558 aa17.3■□□□□ 0.36
SMPD4-210ENST00000441135 METTL27Q8N6F8 245 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms