RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 TMEM88BA6NKF7 163 aa12.92□□□□□ -0.34
ACTN1-204ENST00000438964 CDK2AP1O14519 115 aa12.92□□□□□ -0.34
ACTN1-204ENST00000438964 ITGA2P17301 1181 aa12.92□□□□□ -0.34
ACTN1-204ENST00000438964 DBPQ10586 325 aaPredicted RBP12.92□□□□□ -0.34
ACTN1-204ENST00000438964 HNRNPA0Q13151 305 aaKnown RBP12.92□□□□□ -0.34
ACTN1-204ENST00000438964 KRR1Q13601 381 aaKnown RBP12.92□□□□□ -0.34
ACTN1-204ENST00000438964 XKR4Q5GH76 650 aa12.92□□□□□ -0.34
ACTN1-204ENST00000438964 TSEN54Q7Z6J9 526 aaKnown RBP12.92□□□□□ -0.34
ACTN1-204ENST00000438964 ATCAYQ86WG3 371 aa12.92□□□□□ -0.34
ACTN1-204ENST00000438964 BBS7Q8IWZ6 715 aa12.92□□□□□ -0.34
ACTN1-204ENST00000438964 EID2BQ96D98 161 aa12.92□□□□□ -0.34
ACTN1-204ENST00000438964 SMAD5Q99717 465 aaKnown RBP12.92□□□□□ -0.34
ACTN1-204ENST00000438964 ATG10Q9H0Y0 220 aa12.92□□□□□ -0.34
ACTN1-204ENST00000438964 ELOVL6Q9H5J4 265 aa12.92□□□□□ -0.34
ACTN1-204ENST00000438964 FAM105AQ9NUU6 356 aa12.92□□□□□ -0.34
ACTN1-204ENST00000438964 TMEM248Q9NWD8 314 aa12.92□□□□□ -0.34
ACTN1-204ENST00000438964 NUDT4Q9NZJ9 180 aa12.92□□□□□ -0.34
ACTN1-204ENST00000438964 ITM2BQ9Y287 266 aa12.92□□□□□ -0.34
ACTN1-204ENST00000438964 DOCK4Q8N1I0 1966 aa12.92□□□□□ -0.34
ACTN1-204ENST00000438964 PCDH7O60245 1069 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 CSF3P09919 207 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 TSPAN19P0C672 248 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 LPOP22079 712 aaPredicted RBP12.91□□□□□ -0.34
ACTN1-204ENST00000438964 APEX1P27695 318 aaKnown RBP12.91□□□□□ -0.34
ACTN1-204ENST00000438964 GPC1P35052 558 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 FAPQ12884 760 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 TATDN3Q17R31 274 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 FLYWCH1Q4VC44 716 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 DALRD3Q5D0E6 543 aaKnown RBP12.91□□□□□ -0.34
ACTN1-204ENST00000438964 PDZK1Q5T2W1 519 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 GLRX5Q86SX6 157 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 FAM109AQ8N4B1 249 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 ZFP41Q8N8Y5 198 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 ENKURQ8TC29 256 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 PMEPA1Q969W9 287 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 GDF15Q99988 308 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 CCSER2Q9H7U1 834 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 ANKHQ9HCJ1 492 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 ACSL6Q9UKU0 697 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 ST3GAL5Q9UNP4 418 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 CFL2Q9Y281 166 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 PRKAB1Q9Y478 270 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 PCDHB9Q9Y5E1 797 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 RAI2Q9Y5P3 530 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 BRWD3Q6RI45 1802 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 A0A1B0GVC2 190 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 A0A1W2PQL4 384 aaPredicted RBP12.91□□□□□ -0.34
ACTN1-204ENST00000438964 FABP12A6NFH5 140 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 A6NIN4 97 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 FAM25AB3EWG3 89 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 FAM25CB3EWG5 89 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 FAM25GB3EWG6 89 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 KPNA5O15131 536 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 LAMP1P11279 417 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 COX7A2P14406 83 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 KIR3DL1P43629 444 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 MRPL19P49406 292 aaKnown RBP12.91□□□□□ -0.34
ACTN1-204ENST00000438964 UPP1Q16831 310 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 C22orf42Q6IC83 251 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 FAHD1Q6P587 224 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 ZNF852Q6ZMS4 543 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 AGMOQ6ZNB7 445 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 TMC8Q8IU68 726 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 ZNF683Q8IZ20 524 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 STK40Q8N2I9 435 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 TMEM86AQ8N2M4 240 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 TEX26Q8N6G2 289 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 SPERTQ8NA61 448 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 ATP6V1C2Q8NEY4 427 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 OR8H1Q8NGG4 311 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 OR5AK3PQ8NH89 298 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 TRIB3Q96RU7 358 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 SRRQ9GZT4 340 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 MKRN2Q9H000 416 aaKnown RBP12.91□□□□□ -0.34
ACTN1-204ENST00000438964 GABARAPL1Q9H0R8 117 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 ZNF408Q9H9D4 720 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 GALNT9Q9HCQ5 603 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 MCUBQ9NWR8 336 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 CRNNQ9UBG3 495 aaPredicted RBP12.91□□□□□ -0.34
ACTN1-204ENST00000438964 COMMD3Q9UBI1 195 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 SNX7Q9UNH6 387 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 C5orf42Q9H799 3197 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 UNC80Q8N2C7 3258 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 LOC102723532A0A0G2JNH3 316 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 WNT9AO14904 365 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 SUV39H1O43463 412 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 EPN2O95208 641 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 ODC1P11926 461 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 HLA-EP13747 358 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 EPB42P16452 691 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 CRATP43155 626 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 TTPAP49638 278 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 MAN2A2P49641 1150 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 KCNJ10P78508 379 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 IL10RBQ08334 325 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 ATXN7L2Q5T6C5 722 aaPredicted RBP12.91□□□□□ -0.34
ACTN1-204ENST00000438964 B3GLCTQ6Y288 498 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 PTCHD4Q6ZW05 846 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 METTL23Q86XA0 190 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 MEX3DQ86XN8 651 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms