RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 TNNI3P19429 210 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 TCN1P20061 433 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 ITGAXP20702 1163 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 MSR1P21757 451 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 EPHB2P29323 1055 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 HLA-FP30511 346 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 FCGR2BP31994 310 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 CEBPDP49716 269 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 BLKP51451 505 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 LOXL3P58215 753 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 PROK1P58294 105 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 RPS15P62841 145 aaKnown RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 CXADRP78310 365 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 CBX1P83916 185 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 MC2RQ01718 297 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 ROR2Q01974 943 aaKnown RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 OCA2Q04671 838 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 ARHGAP1Q07960 439 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 SPOCK1Q08629 439 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 FUT7Q11130 342 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 MERTKQ12866 999 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 GPS2Q13227 327 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 ITGB3BPQ13352 177 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 GPR176Q14439 515 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 DMC1Q14565 340 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 DRAP1Q14919 205 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 SNCBQ16143 134 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 HIST2H2ACQ16777 129 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 TPD52L1Q16890 204 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 EDRF1Q3B7T1 1238 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 TEX44Q53QW1 395 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 DCAF6Q58WW2 860 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 BEX5Q5H9J7 111 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 PPP6R3Q5H9R7 873 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 CEP78Q5JTW2 689 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 SPOUT1Q5T280 376 aaKnown RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 MLIPQ5VWP3 458 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 B3GNTL1Q67FW5 361 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 ZNF425Q6IV72 752 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 SLC25A25Q6KCM7 469 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 PRSS55Q6UWB4 352 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 FAM198BQ6UWH4 519 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 STXBP4Q6ZWJ1 553 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 COPS6Q7L5N1 327 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 GRASPQ7Z6J2 395 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 VTCN1Q7Z7D3 282 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 ASPGQ86U10 573 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 GPR65Q8IYL9 337 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 ADGRF4Q8IZF3 695 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 LRRC75A-AS1Q8N1F1 130 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 SLC25A41Q8N5S1 370 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 PSD4Q8NDX1 1056 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 TRPV3Q8NET8 790 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 WIPF2Q8TF74 440 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 GLYATL2Q8WU03 294 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 SCFD1Q8WVM8 642 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 SOCS4Q8WXH5 440 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 THOC1Q96FV9 657 aaKnown RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 TMEM68Q96MH6 324 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 INPP4AQ96PE3 977 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 NPAS2Q99743 824 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 NMNAT2Q9BZQ4 307 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 TSGA10Q9BZW7 698 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 TKTL2Q9H0I9 626 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 TMEM185BQ9H7F4 350 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 NTN4Q9HB63 628 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 GALNT9Q9HCQ5 603 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 HIF1ANQ9NWT6 349 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 SLC39A1Q9NY26 324 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 TFCP2L1Q9NZI6 479 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 NDRG4Q9ULP0 352 aaKnown RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 AAR2Q9Y312 384 aaKnown RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 MYO15BQ96JP2 1530 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 KAT6AQ92794 2004 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 A0A1B0GTW7 788 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 A0A1W2PPV4 95 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 TMEM120BA0PK00 339 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 CDHR4A6H8M9 788 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 C3orf70A6NLC5 250 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 OR5K4A6NMS3 321 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 A8MUI8 341 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 H0YGN5 161 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 GOLGA8MH3BSY2 632 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 SLC28A1O00337 649 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 NR5A2O00482 541 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 CLDN4O14493 209 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 KLF11O14901 512 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 SEC14L5O43304 696 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 ERN1O75460 977 aaKnown RBP3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 GPC4O75487 556 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 ZNF189O75820 626 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 RBBP9O75884 186 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 CABYRO75952 493 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 DFFBO76075 338 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 UFL1O94874 794 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 STBD1O95210 358 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 OR6A2O95222 327 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 LCA5LO95447 670 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms