RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 CRB2Q5IJ48 1285 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.47□□□□□ -1.37
CSDE1-205ENST00000438362 C22orf39Q6P5X5 142 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 Q6ZNX1 250 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 MSANTD1Q6ZTZ1 278 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 FGD2Q7Z6J4 655 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 FLCNQ8NFG4 579 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 FEVQ99581 238 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 ZSCAN5AQ9BUG6 496 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 UCK2Q9BZX2 261 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 SLC22A4Q9H015 551 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 RNF208Q9H0X6 261 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 TRIT1Q9H3H1 467 aaKnown RBP6.47□□□□□ -1.37
CSDE1-205ENST00000438362 TUBB1Q9H4B7 451 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 EQTNQ9NQ60 294 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 DUS2Q9NX74 493 aaKnown RBP6.47□□□□□ -1.37
CSDE1-205ENST00000438362 MS4A12Q9NXJ0 267 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 B3GNT3Q9Y2A9 372 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 MRPS23Q9Y3D9 190 aaKnown RBP6.47□□□□□ -1.37
CSDE1-205ENST00000438362 A0A0U1RQS6 177 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 UPK3BL1B0FP48 263 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 UPK3BL2E5RIL1 263 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 K7ERQ8 282 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 E2F3O00716 465 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 PGRMC2O15173 223 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 PRNPP04156 253 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 LCKP06239 509 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 STSP08842 583 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 MTHFD2P13995 350 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 ZNF30P17039 623 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 BPIP17213 487 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 ZNF10P21506 573 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-205ENST00000438362 RPS3P23396 243 aaKnown RBP eCLIP6.47□□□□□ -1.372e-6■■□□□ 11.8
CSDE1-205ENST00000438362 GTF2E2P29084 291 aaKnown RBP6.47□□□□□ -1.37
CSDE1-205ENST00000438362 CSTF2P33240 577 aaKnown RBP eCLIP6.47□□□□□ -1.37
CSDE1-205ENST00000438362 BDKRB1P46663 353 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 RGRP47804 291 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 RGS8P57771 180 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-205ENST00000438362 TAS2R50P59544 299 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 FAM189BP81408 668 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 ZNF763Q0D2J5 394 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 KCNC3Q14003 757 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 PROX2Q3B8N5 592 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 ZNF517Q6ZMY9 492 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-205ENST00000438362 Q6ZSR9 355 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 CXXC5Q7LFL8 322 aaKnown RBP6.47□□□□□ -1.37
CSDE1-205ENST00000438362 KRT74Q7RTS7 529 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 PGBD5Q8N414 524 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 ADAMTS15Q8TE58 950 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 RFKQ969G6 155 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 SLC35G5Q96KT7 338 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 ZNF583Q96ND8 569 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 SMIM14Q96QK8 99 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 FERD3LQ96RJ6 166 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 INPP5KQ9BT40 448 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 OR51B5Q9H339 312 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 CTPS2Q9NRF8 586 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 ZCCHC3Q9NUD5 404 aaKnown RBP6.47□□□□□ -1.37
CSDE1-205ENST00000438362 COMMD3Q9UBI1 195 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 ZNF780BQ9Y6R6 833 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 ADAMTSL1Q8N6G6 1762 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 MUSKO15146 869 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 CACNG3O60359 315 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 ARHGEF15O94989 841 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 BCHEP06276 602 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 MPC1LP0DKB6 136 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 HSD3B1P14060 373 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 HSD3B2P26439 372 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 RYKP34925 604 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 GATMP50440 423 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 KCNC4Q03721 635 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 EMX1Q04741 257 aaPredicted RBP6.46□□□□□ -1.37
CSDE1-205ENST00000438362 RBBP4Q09028 425 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 MTAPQ13126 283 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 CBLBQ13191 982 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 PPIGQ13427 754 aaKnown RBP eCLIP6.46□□□□□ -1.376e-6■□□□□ 9.4
CSDE1-205ENST00000438362 ANKDD1AQ495B1 522 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 RTP2Q5QGT7 225 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 CEACAM20Q6UY09 585 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 Q6ZVL8 140 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 RD3Q7Z3Z2 195 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 GPR149Q86SP6 731 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 TICAM1Q8IUC6 712 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 GJD3Q8N144 294 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 PAPD5Q8NDF8 572 aaKnown RBP6.46□□□□□ -1.37
CSDE1-205ENST00000438362 FAM46DQ8NEK8 389 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 GRPEL2Q8TAA5 225 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 SH3RF2Q8TEC5 729 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 UFD1Q92890 307 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 ZNF514Q96K75 400 aaPredicted RBP6.46□□□□□ -1.37
CSDE1-205ENST00000438362 KCTD7Q96MP8 289 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 FAM129BQ96TA1 746 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 MGLLQ99685 303 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 CCM2Q9BSQ5 444 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 OR2AG1Q9H205 316 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 REEP4Q9H6H4 257 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 TNFRSF12AQ9NP84 129 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 IL26Q9NPH9 171 aa6.46□□□□□ -1.37
CSDE1-205ENST00000438362 IMP3Q9NV31 184 aaKnown RBP6.46□□□□□ -1.37
CSDE1-205ENST00000438362 TMEM30AQ9NV96 361 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms