RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 ALG9Q9H6U8 611 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 NMRAL1Q9HBL8 299 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 ZNF304Q9HCX3 659 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 SNX15Q9NRS6 342 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 IGSF5Q9NSI5 407 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 WWOXQ9NZC7 414 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 ANKMY1Q9P2S6 941 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 TBK1Q9UHD2 729 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 TCFL5Q9UL49 500 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 RNF112Q9ULX5 631 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 RUVBL1Q9Y265 456 aaKnown RBP5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 MRPS2Q9Y399 296 aaKnown RBP5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 PTRH2Q9Y3E5 179 aaKnown RBP5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 OARD1Q9Y530 152 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 MAP1BP46821 2468 aaKnown RBP5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 A0A1B0GX78 115 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 TLDC2A0PJX2 215 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 A6NL46 340 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 SMIM23A6NLE4 172 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 SUPT3HB4E1H0 165 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 C21orf140B9A014 251 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 GOLGA8RI6L899 631 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 MAP2K7O14733 419 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 CNOT3O75175 753 aaKnown RBP5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 SUPT3HO75486 399 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 STK16O75716 305 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 KLF7O75840 302 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 DNAJB5O75953 348 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 KRT38O76015 456 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 KLHL2O95198 593 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 B3GALT4O96024 378 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 ALDOAP04075 364 aaKnown RBP5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 THBS1P07996 1170 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 RAB40ALP0C0E4 278 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 C1GALT1C1LP0DN25 315 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 PIM1P11309 404 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 EZRP15311 586 aaKnown RBP5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 ITGAXP20702 1163 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 HRH2P25021 359 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 GCAP28676 217 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 BCL6P41182 706 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 FOLR3P41439 243 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 MAP2K3P46734 347 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 HNMTP50135 292 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 CCL11P51671 97 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 CCR8P51685 355 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 RPS15AP62244 130 aaKnown RBP5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 MAT1AQ00266 395 aaKnown RBP5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 ILF2Q12905 390 aaKnown RBP5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 IL10RAQ13651 578 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 UBAP2LQ14157 1087 aaKnown RBP5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 NAA25Q14CX7 972 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 FAM83EQ2M2I3 478 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 ERCC6LQ2NKX8 1250 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 COLEC12Q5KU26 742 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 LGSNQ5TDP6 509 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 FAAH2Q6GMR7 532 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 SULT1C3Q6IMI6 304 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 BORAQ6PGQ7 559 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 NXPE4Q6UWF7 544 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 ZNF517Q6ZMY9 492 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 OVCH1Q7RTY7 1134 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 TMPRSS11BQ86T26 416 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 ADAMTSL2Q86TH1 951 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 SYVN1Q86TM6 617 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 ASPGQ86U10 573 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 CENPLQ8N0S6 344 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 MFSD9Q8NBP5 474 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 OR4K1Q8NGD4 311 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 OR9A4Q8NGU2 314 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 ZCCHC10Q8TBK6 192 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 SNRNP27Q8WVK2 155 aaKnown RBP5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 SLC44A1Q8WWI5 657 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 SLC13A3Q8WWT9 602 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 CCT6BQ92526 530 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 KIAA1191Q96A73 305 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 TM4SF19Q96DZ7 209 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 DMRTB1Q96MA1 342 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 DPH2Q9BQC3 489 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 TMEM79Q9BSE2 394 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 HAUS8Q9BT25 410 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 FUT8Q9BYC5 575 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 RBCK1Q9BYM8 510 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 ANKZF1Q9H8Y5 726 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 ZNF71Q9NQZ8 489 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 SLC22A11Q9NSA0 550 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 DNAJC11Q9NVH1 559 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 CPSF2Q9P2I0 782 aaKnown RBP5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 SRPK3Q9UPE1 567 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 ASB1Q9Y576 335 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 PCDHGA6Q9Y5G7 932 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 KLK4Q9Y5K2 254 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 KCNE2Q9Y6J6 123 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 TNRC6AQ8NDV7 1962 aaKnown RBP5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 FER1L5A0AVI2 2057 aa5.49□□□□□ -1.53
HMGB3P24-201ENST00000433260 BPTFQ12830 3046 aa5.48□□□□□ -1.53
HMGB3P24-201ENST00000433260 KCNE1BA0A087WTH5 132 aa5.48□□□□□ -1.53
HMGB3P24-201ENST00000433260 A0A1W2PPM1 405 aa5.48□□□□□ -1.53
HMGB3P24-201ENST00000433260 FITM1A5D6W6 292 aa5.48□□□□□ -1.53
HMGB3P24-201ENST00000433260 OR2W5A6NFC9 320 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms