RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 NDRG2Q9UN36 371 aaKnown RBP10.71□□□□□ -0.69
SEMA4D-209ENST00000429836 PCDHGA2Q9Y5H1 932 aa10.71□□□□□ -0.69
SEMA4D-209ENST00000429836 PCP4L1A6NKN8 68 aa10.71□□□□□ -0.7
SEMA4D-209ENST00000429836 BTN3A3O00478 584 aa10.71□□□□□ -0.7
SEMA4D-209ENST00000429836 GPR182O15218 404 aa10.71□□□□□ -0.7
SEMA4D-209ENST00000429836 ULK1O75385 1050 aa10.71□□□□□ -0.7
SEMA4D-209ENST00000429836 CDRT1O95170 752 aa10.71□□□□□ -0.7
SEMA4D-209ENST00000429836 KCNK5O95279 499 aa10.71□□□□□ -0.7
SEMA4D-209ENST00000429836 GLUD1P00367 558 aa10.71□□□□□ -0.7
SEMA4D-209ENST00000429836 ICAM2P13598 275 aa10.71□□□□□ -0.7
SEMA4D-209ENST00000429836 ENGP17813 658 aa10.71□□□□□ -0.7
SEMA4D-209ENST00000429836 TNNI3P19429 210 aa10.71□□□□□ -0.7
SEMA4D-209ENST00000429836 CPN2P22792 545 aa10.71□□□□□ -0.7
SEMA4D-209ENST00000429836 CHMP24386 653 aa10.71□□□□□ -0.7
SEMA4D-209ENST00000429836 MAN2A2P49641 1150 aa10.71□□□□□ -0.7
SEMA4D-209ENST00000429836 RPS14P62263 151 aaKnown RBP10.71□□□□□ -0.7
SEMA4D-209ENST00000429836 CSTF3Q12996 717 aaKnown RBP10.71□□□□□ -0.7
SEMA4D-209ENST00000429836 POU4F3Q15319 338 aa10.71□□□□□ -0.7
SEMA4D-209ENST00000429836 TMEM65Q6PI78 240 aa10.71□□□□□ -0.7
SEMA4D-209ENST00000429836 ANKS3Q6ZW76 656 aa10.71□□□□□ -0.7
SEMA4D-209ENST00000429836 EIF3MQ7L2H7 374 aaKnown RBP10.71□□□□□ -0.7
SEMA4D-209ENST00000429836 TMEM80Q96HE8 168 aa10.71□□□□□ -0.7
SEMA4D-209ENST00000429836 B3GALT6Q96L58 329 aa10.71□□□□□ -0.7
SEMA4D-209ENST00000429836 AIFM2Q9BRQ8 373 aa10.71□□□□□ -0.7
SEMA4D-209ENST00000429836 TAPBPLQ9BX59 468 aa10.71□□□□□ -0.7
SEMA4D-209ENST00000429836 MRPL9Q9BYD2 267 aaKnown RBP10.71□□□□□ -0.7
SEMA4D-209ENST00000429836 PPIL3Q9H2H8 161 aaKnown RBP10.71□□□□□ -0.7
SEMA4D-209ENST00000429836 ING3Q9NXR8 418 aa10.71□□□□□ -0.7
SEMA4D-209ENST00000429836 AP3M1Q9Y2T2 418 aa10.71□□□□□ -0.7
SEMA4D-209ENST00000429836 LOC285556D6RIA3 1793 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 MEIS3P2A8K0S8 358 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 TNFRSF11BO00300 401 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 HOXB9P17482 250 aaPredicted RBP10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 HNRNPA0Q13151 305 aaKnown RBP10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 CDH18Q13634 790 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 TTLL4Q14679 1199 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 MSANTD2Q6P1R3 559 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 PTOV1Q86YD1 416 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 GALNT11Q8NCW6 608 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 OR10G2Q8NGC3 310 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 OR9Q2Q8NGE9 314 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 GPR152Q8TDT2 470 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 SMARCD1Q96GM5 515 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 C7orf34Q96L11 122 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 SPATA9Q9BWV2 254 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 APOL5Q9BWW9 433 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 NUDT4Q9NZJ9 180 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 H3BRB1 525 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 CLIC1O00299 241 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 TAPBPO15533 448 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 NBNO60934 754 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 SLC22A5O76082 557 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 OPN1SWP03999 348 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 FGF1P05230 155 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 ACADMP11310 421 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 DDCP20711 480 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 APEX1P27695 318 aaKnown RBP10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 AFF1P51825 1210 aaKnown RBP10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 CRYBA2P53672 197 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 MAD2L1Q13257 205 aaPredicted RBP10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 EIF4EBP2Q13542 120 aaPredicted RBP10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 SUZ12Q15022 739 aaKnown RBP10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 CYP27C1Q4G0S4 372 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 ZBTB37Q5TC79 503 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 KLHL17Q6TDP4 642 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 ZNF621Q6ZSS3 439 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 CBLL1Q75N03 491 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 TSEN54Q7Z6J9 526 aaKnown RBP10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 ZNF598Q86UK7 904 aaKnown RBP10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 CDH24Q86UP0 819 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 C9orf62Q8N4C0 152 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 ATP6V1C2Q8NEY4 427 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 LPCAT1Q8NF37 534 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 SPPL2AQ8TCT8 520 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 TRPM4Q8TD43 1214 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 TMEM40Q8WWA1 233 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 MAL2Q969L2 176 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 TMEM203Q969S6 136 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 UPRTQ96BW1 309 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 WDFY2Q96P53 400 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 GTPBP2Q9BX10 602 aaKnown RBP10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 LAMA3Q16787 3333 aa10.7□□□□□ -0.7
SEMA4D-209ENST00000429836 PTGESO14684 152 aa10.69□□□□□ -0.7
SEMA4D-209ENST00000429836 FFAR2O15552 330 aa10.69□□□□□ -0.7
SEMA4D-209ENST00000429836 AP2A2O94973 939 aa10.69□□□□□ -0.7
SEMA4D-209ENST00000429836 CPSF4O95639 269 aaKnown RBP10.69□□□□□ -0.7
SEMA4D-209ENST00000429836 PRKACAP17612 351 aa10.69□□□□□ -0.7
SEMA4D-209ENST00000429836 ACVRL1P37023 503 aa10.69□□□□□ -0.7
SEMA4D-209ENST00000429836 CRYBB2P43320 205 aa10.69□□□□□ -0.7
SEMA4D-209ENST00000429836 MAP2K3P46734 347 aa10.69□□□□□ -0.7
SEMA4D-209ENST00000429836 OR1E2P47887 323 aa10.69□□□□□ -0.7
SEMA4D-209ENST00000429836 UBE3AQ05086 875 aa10.69□□□□□ -0.7
SEMA4D-209ENST00000429836 PPIGQ13427 754 aaKnown RBP eCLIP10.69□□□□□ -0.7
SEMA4D-209ENST00000429836 EIF4HQ15056 248 aaKnown RBP10.69□□□□□ -0.7
SEMA4D-209ENST00000429836 PCBP2Q15366 365 aaKnown RBP eCLIP10.69□□□□□ -0.7
SEMA4D-209ENST00000429836 ZRANB3Q5FWF4 1079 aa10.69□□□□□ -0.7
SEMA4D-209ENST00000429836 TOR1AIP1Q5JTV8 583 aa10.69□□□□□ -0.7
SEMA4D-209ENST00000429836 TIGD3Q6B0B8 471 aa10.69□□□□□ -0.7
SEMA4D-209ENST00000429836 XKRXQ6PP77 449 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms