RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 ASZ1Q8WWH4 475 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 SOCS4Q8WXH5 440 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 OMA1Q96E52 524 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 ALOXE3Q9BYJ1 711 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 NLNQ9BYT8 704 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 TMEM245Q9H330 911 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 CFL2Q9Y281 166 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 FABP12A6NFH5 140 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 AGAP5A6NIR3 686 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 FADS2P1A8MWK0 482 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 TAPBPO15533 448 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 DYRK3O43781 588 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 STC2O76061 302 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 CCNB2O95067 398 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 PRSS23O95084 383 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 C6orf47O95873 294 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 IFNW1P05000 195 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 ITGA2P17301 1181 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 SLC35A2P78381 396 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 QPRTQ15274 297 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 NDUFA5Q16718 116 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 PROX2Q3B8N5 592 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 C10orf111Q8N326 155 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 METTL4Q8N3J2 472 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 PARP16Q8N5Y8 322 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 FOXJ1Q92949 421 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 MS4A4AQ96JQ5 239 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 CCM2Q9BSQ5 444 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 CFAP97Q9P2B7 532 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 NEU3Q9UQ49 428 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 LYVE1Q9Y5Y7 322 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 PIPSLA2A3N6 862 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 PRR23AA6NEV1 266 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 PLK4O00444 970 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 SSTR4P31391 388 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 SLC11A1P49279 550 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 SRP54P61011 504 aaKnown RBP13.28□□□□□ -0.28
SGMS1-203ENST00000429490 HSPB3Q12988 150 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 AGAP7PQ5VUJ5 663 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 LIMS2Q7Z4I7 341 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 APCDD1Q8J025 514 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 FAM129BQ96TA1 746 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 YME1L1Q96TA2 773 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 CPPED1Q9BRF8 314 aaPredicted RBP13.28□□□□□ -0.28
SGMS1-203ENST00000429490 ZNF638Q14966 1978 aaKnown RBP13.28□□□□□ -0.28
SGMS1-203ENST00000429490 DOCK3Q8IZD9 2030 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 FAM240BA0A1B0GVZ2 78 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 CASKO14936 926 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 SYN3O14994 580 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 PQBP1O60828 265 aaKnown RBP13.28□□□□□ -0.28
SGMS1-203ENST00000429490 DNAJB5O75953 348 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 CDRT1O95170 752 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 KLKB1P03952 638 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 CAPNS1P04632 268 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 ANXA8P13928 327 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 GABRR2P28476 465 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 CA5AP35218 305 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 RFX3P48380 749 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 EPHB3P54753 998 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 AP1S1P61966 158 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 GPR17Q13304 367 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 SLC14A1Q13336 389 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 LDLRAD1Q5T700 205 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 LIPKQ5VXJ0 399 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 RAB8BQ92930 207 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 CAPN10Q9HC96 672 aa13.28□□□□□ -0.28
SGMS1-203ENST00000429490 H2AFY2Q9P0M6 372 aaPredicted RBP13.28□□□□□ -0.28
SGMS1-203ENST00000429490 OR6C70A6NIJ9 312 aa13.27□□□□□ -0.28
SGMS1-203ENST00000429490 DRGXA6NNA5 263 aa13.27□□□□□ -0.28
SGMS1-203ENST00000429490 SOBPA7XYQ1 873 aa13.27□□□□□ -0.28
SGMS1-203ENST00000429490 SOX3P41225 446 aa13.27□□□□□ -0.28
SGMS1-203ENST00000429490 BDKRB1P46663 353 aa13.27□□□□□ -0.28
SGMS1-203ENST00000429490 MANFP55145 182 aaKnown RBP13.27□□□□□ -0.28
SGMS1-203ENST00000429490 NKX3-2P78367 333 aa13.27□□□□□ -0.28
SGMS1-203ENST00000429490 SETMARQ53H47 684 aaPredicted RBP13.27□□□□□ -0.28
SGMS1-203ENST00000429490 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.27□□□□□ -0.28
SGMS1-203ENST00000429490 CLLU1OSQ5K130 101 aa13.27□□□□□ -0.28
SGMS1-203ENST00000429490 SYCE2Q6PIF2 218 aa13.27□□□□□ -0.28
SGMS1-203ENST00000429490 ZSWIM9Q86XI8 627 aa13.27□□□□□ -0.28
SGMS1-203ENST00000429490 MYLIPQ8WY64 445 aa13.27□□□□□ -0.28
SGMS1-203ENST00000429490 CMTM7Q96FZ5 175 aa13.27□□□□□ -0.28
SGMS1-203ENST00000429490 ZNF486Q96H40 463 aaPredicted RBP13.27□□□□□ -0.28
SGMS1-203ENST00000429490 CNDP2Q96KP4 475 aaKnown RBP13.27□□□□□ -0.28
SGMS1-203ENST00000429490 MMP28Q9H239 520 aa13.27□□□□□ -0.28
SGMS1-203ENST00000429490 SP140LQ9H930 580 aa13.27□□□□□ -0.28
SGMS1-203ENST00000429490 TAS2R9Q9NYW1 312 aa13.27□□□□□ -0.28
SGMS1-203ENST00000429490 TRPS1Q9UHF7 1281 aa13.27□□□□□ -0.28
SGMS1-203ENST00000429490 ANGPT4Q9Y264 503 aa13.27□□□□□ -0.28
SGMS1-203ENST00000429490 SPIN1Q9Y657 262 aaPredicted RBP13.27□□□□□ -0.28
SGMS1-203ENST00000429490 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.27□□□□□ -0.29
SGMS1-203ENST00000429490 TRBC2A0A5B9 178 aa13.27□□□□□ -0.29
SGMS1-203ENST00000429490 TMEM88BA6NKF7 163 aa13.27□□□□□ -0.29
SGMS1-203ENST00000429490 NOTOA8MTQ0 251 aa13.27□□□□□ -0.29
SGMS1-203ENST00000429490 J3KTA2 159 aa13.27□□□□□ -0.29
SGMS1-203ENST00000429490 OAZ2O95190 189 aa13.27□□□□□ -0.29
SGMS1-203ENST00000429490 PTHP01270 115 aa13.27□□□□□ -0.29
SGMS1-203ENST00000429490 ACPPP15309 386 aa13.27□□□□□ -0.29
SGMS1-203ENST00000429490 RPS13P62277 151 aaKnown RBP13.27□□□□□ -0.29
SGMS1-203ENST00000429490 ARF5P84085 180 aa13.27□□□□□ -0.29
SGMS1-203ENST00000429490 TARDBPQ13148 414 aaKnown RBP eCLIP13.27□□□□□ -0.291e-6■■■■□ 26.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms