RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 KIR2DS3K7RE56 304 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 EPN2O95208 641 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 MLYCDO95822 493 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 RPN2P04844 631 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 C1GALT1C1LP0DN25 315 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 TGM1P22735 817 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 KIR2DS5Q14953 304 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 NAA25Q14CX7 972 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 ZNF423Q2M1K9 1284 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 PEAR1Q5VY43 1037 aaPredicted RBP9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 FBXO42Q6P3S6 717 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 PAOXQ6QHF9 649 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 KRTCAP2Q8N6L1 136 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 ARL10Q8N8L6 244 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 FBXO15Q8NCQ5 510 aaPredicted RBP9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 WDR20Q8TBZ3 569 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 RHBDD1Q8TEB9 315 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 PMEPA1Q969W9 287 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 CCDC3Q9BQI4 270 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 NTMT1Q9BV86 223 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 EDEM2Q9BV94 578 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 MMADHCQ9H3L0 296 aaPredicted RBP9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 SEMA6CQ9H3T2 930 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 EML4Q9HC35 981 aaKnown RBP9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 POT1Q9NUX5 634 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 SUSD2Q9UGT4 822 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 CCL27Q9Y4X3 112 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 CACNA1GO43497 2377 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 IGHV1OR21-1A0A087WYE8 117 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 OR5K3A6NET4 321 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 GLOD5A6NK44 160 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 NDUFS4O43181 175 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 ENTPD5O75356 428 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 PROS1P07225 676 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 UROSP10746 265 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 SLC2A4P14672 509 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 CDH3P22223 829 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 CD1CP29017 333 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 SOX11P35716 441 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 CCT8P50990 548 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 MC1RQ01726 317 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 TAF11Q15544 211 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 FRG2Q64ET8 278 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 SPESP1Q6UW49 350 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 TMIGD1Q6UXZ0 262 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 RINLQ6ZS11 566 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 EFL1Q7Z2Z2 1120 aaKnown RBP9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 FNDC5Q8NAU1 212 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 OR4C6Q8NH72 309 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 ATL1Q8WXF7 558 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 AHCYL2Q96HN2 611 aaKnown RBP9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 NAF1Q96HR8 494 aaKnown RBP9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 FRG2BQ96QU4 278 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 URB1O60287 2271 aaKnown RBP9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 FCHO1O14526 889 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 TOR1BO14657 336 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 LSM1O15116 133 aaKnown RBP9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 AKAP10O43572 662 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 SEC22BO75396 215 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 NME6O75414 186 aaPredicted RBP9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 EEDO75530 441 aaKnown RBP9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 RPLP0P05388 317 aaKnown RBP9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 EBLN1P0CF75 366 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 G6PDP11413 515 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 JUPP14923 745 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 SHMT2P34897 504 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 CNR2P34972 360 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 FASLGP48023 281 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 RXRGP48443 463 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 DAB2P98082 770 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 BLMHQ13867 455 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 SLC9A5Q14940 896 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 GPR19Q15760 415 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 AP5B1Q2VPB7 878 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 C6orf136Q5SQH8 315 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 LARP4Q71RC2 724 aaKnown RBP eCLIP9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 TSSK3Q96PN8 268 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 CTRCQ99895 268 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 C17orf62Q9BQA9 187 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 MESP1Q9BRJ9 268 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 RBCK1Q9BYM8 510 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 ERVMER34-1Q9H9K5 563 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 TAS2R1Q9NYW7 299 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 OR6C2Q9NZP2 312 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 CCDC167Q9P0B6 97 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 NCDNQ9UBB6 729 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 PCDHB11Q9Y5F2 797 aa9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 COPG1Q9Y678 874 aaKnown RBP9.11□□□□□ -0.95
HMGCLL1-206ENST00000428842 ANKRD11Q6UB99 2663 aaPredicted RBP9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 CAPN14A8MX76 684 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 ENO1P06733 434 aaKnown RBP9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 CD59P13987 128 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 CAPZBP47756 277 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 PTDSS1P48651 473 aaKnown RBP9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 VSX2P58304 361 aaPredicted RBP9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 UFM1P61960 85 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 OGFOD3Q6PK18 319 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 GK5Q6ZS86 529 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 VN1R4Q7Z5H5 301 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms