RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 MINDY4Q4G0A6 757 aa14.65□□□□□ -0.06
SEC13-210ENST00000428626 LCTLQ6UWM7 567 aa14.65□□□□□ -0.06
SEC13-210ENST00000428626 CPEB2Q7Z5Q1 589 aaKnown RBP14.65□□□□□ -0.06
SEC13-210ENST00000428626 ANKRD37Q7Z713 158 aa14.65□□□□□ -0.06
SEC13-210ENST00000428626 OR5T3Q8NGG3 340 aa14.65□□□□□ -0.06
SEC13-210ENST00000428626 LINGO1Q96FE5 620 aa14.65□□□□□ -0.06
SEC13-210ENST00000428626 RBCK1Q9BYM8 510 aa14.65□□□□□ -0.06
SEC13-210ENST00000428626 RNF32Q9H0A6 362 aa14.65□□□□□ -0.06
SEC13-210ENST00000428626 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.65□□□□□ -0.067e-9■■□□□ 12.4
SEC13-210ENST00000428626 OR5H15A6NDH6 313 aa14.64□□□□□ -0.07
SEC13-210ENST00000428626 PMP22Q01453 160 aa14.64□□□□□ -0.07
SEC13-210ENST00000428626 ZNF33BQ06732 778 aa14.64□□□□□ -0.07
SEC13-210ENST00000428626 SP140Q13342 867 aa14.64□□□□□ -0.07
SEC13-210ENST00000428626 HP1BP3Q5SSJ5 553 aaPredicted RBP14.64□□□□□ -0.07
SEC13-210ENST00000428626 TEDDM1Q5T9Z0 273 aa14.64□□□□□ -0.07
SEC13-210ENST00000428626 TRMT10BQ6PF06 316 aaKnown RBP14.64□□□□□ -0.07
SEC13-210ENST00000428626 ASPGQ86U10 573 aa14.64□□□□□ -0.07
SEC13-210ENST00000428626 C17orf64Q86WR6 236 aa14.64□□□□□ -0.07
SEC13-210ENST00000428626 ZNF740Q8NDX6 193 aa14.64□□□□□ -0.07
SEC13-210ENST00000428626 OR56A3Q8NH54 315 aa14.64□□□□□ -0.07
SEC13-210ENST00000428626 SLC13A3Q8WWT9 602 aa14.64□□□□□ -0.07
SEC13-210ENST00000428626 TSLPQ969D9 159 aa14.64□□□□□ -0.07
SEC13-210ENST00000428626 THAP11Q96EK4 314 aa14.64□□□□□ -0.07
SEC13-210ENST00000428626 NAP1L3Q99457 506 aaPredicted RBP14.64□□□□□ -0.07
SEC13-210ENST00000428626 OLFM1Q99784 485 aa14.64□□□□□ -0.07
SEC13-210ENST00000428626 PCBD2Q9H0N5 130 aa14.64□□□□□ -0.07
SEC13-210ENST00000428626 LANCL2Q9NS86 450 aa14.64□□□□□ -0.07
SEC13-210ENST00000428626 TAS2R13Q9NYV9 303 aa14.64□□□□□ -0.07
SEC13-210ENST00000428626 SNX12Q9UMY4 172 aa14.64□□□□□ -0.07
SEC13-210ENST00000428626 NAALAD2Q9Y3Q0 740 aa14.64□□□□□ -0.07
SEC13-210ENST00000428626 A8MUI8 341 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 SLC16A5O15375 505 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 CDC123O75794 336 aaPredicted RBP14.63□□□□□ -0.07
SEC13-210ENST00000428626 PRF1P14222 555 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 RGS4P49798 205 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 RHAGQ02094 409 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 PPP1R7Q15435 360 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 INAQ16352 499 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 BTBD16Q32M84 506 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 BBS9Q3SYG4 887 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 SPANXN3Q5MJ09 141 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 MFSD4BQ5TF39 518 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 ABHD17BQ5VST6 288 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 PLAG1Q6DJT9 500 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 CAPN13Q6MZZ7 669 aaPredicted RBP14.63□□□□□ -0.07
SEC13-210ENST00000428626 LRRC8EQ6NSJ5 796 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 UGT3A1Q6NUS8 523 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 H3F3CQ6NXT2 135 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 TMEM207Q6UWW9 146 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 BEST3Q8N1M1 668 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 MYO1HQ8N1T3 1032 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 AFAP1L2Q8N4X5 818 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 MFSD9Q8NBP5 474 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 CAMKVQ8NCB2 501 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 ABHD11Q8NFV4 315 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 OR4K1Q8NGD4 311 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 GRK7Q8WTQ7 553 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 METTL21AQ8WXB1 218 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 RELTQ969Z4 430 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 CERS2Q96G23 380 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 PEX11GQ96HA9 241 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 HES7Q9BYE0 225 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 STMN3Q9NZ72 180 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 ASIC3Q9UHC3 531 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 APCP25054 2843 aa14.63□□□□□ -0.07
SEC13-210ENST00000428626 PRAMEF2O60811 474 aa14.62□□□□□ -0.07
SEC13-210ENST00000428626 UQCRHP07919 91 aa14.62□□□□□ -0.07
SEC13-210ENST00000428626 ICAM2P13598 275 aa14.62□□□□□ -0.07
SEC13-210ENST00000428626 OLR1P78380 273 aa14.62□□□□□ -0.07
SEC13-210ENST00000428626 CATSPEREQ5SY80 951 aa14.62□□□□□ -0.07
SEC13-210ENST00000428626 HECTD2Q5U5R9 776 aa14.62□□□□□ -0.07
SEC13-210ENST00000428626 PCGF5Q86SE9 256 aa14.62□□□□□ -0.07
SEC13-210ENST00000428626 SLCO2A1Q92959 643 aa14.62□□□□□ -0.07
SEC13-210ENST00000428626 SNF8Q96H20 258 aa14.62□□□□□ -0.07
SEC13-210ENST00000428626 SIGLEC12Q96PQ1 595 aa14.62□□□□□ -0.07
SEC13-210ENST00000428626 SARGQ9BW04 601 aa14.62□□□□□ -0.07
SEC13-210ENST00000428626 KCNF1Q9H3M0 494 aa14.62□□□□□ -0.07
SEC13-210ENST00000428626 ANKHQ9HCJ1 492 aa14.62□□□□□ -0.07
SEC13-210ENST00000428626 ABI3Q9P2A4 366 aa14.62□□□□□ -0.07
SEC13-210ENST00000428626 SLC22A7Q9Y694 548 aa14.62□□□□□ -0.07
SEC13-210ENST00000428626 FBN2P35556 2912 aa14.62□□□□□ -0.07
SEC13-210ENST00000428626 C4orf51C9J302 202 aa14.61□□□□□ -0.07
SEC13-210ENST00000428626 TP73O15350 636 aa14.61□□□□□ -0.07
SEC13-210ENST00000428626 UNC5CO95185 931 aa14.61□□□□□ -0.07
SEC13-210ENST00000428626 RASAL1O95294 804 aa14.61□□□□□ -0.07
SEC13-210ENST00000428626 TTC4O95801 387 aa14.61□□□□□ -0.07
SEC13-210ENST00000428626 CYC1P08574 325 aa14.61□□□□□ -0.07
SEC13-210ENST00000428626 ELK3P41970 407 aa14.61□□□□□ -0.07
SEC13-210ENST00000428626 TUBA3CQ13748 450 aa14.61□□□□□ -0.07
SEC13-210ENST00000428626 SFT2D3Q587I9 215 aa14.61□□□□□ -0.07
SEC13-210ENST00000428626 ACER2Q5QJU3 275 aa14.61□□□□□ -0.07
SEC13-210ENST00000428626 DUPD1Q68J44 220 aa14.61□□□□□ -0.07
SEC13-210ENST00000428626 TUBA3EQ6PEY2 450 aa14.61□□□□□ -0.07
SEC13-210ENST00000428626 PAPD4Q6PIY7 484 aaKnown RBP14.61□□□□□ -0.07
SEC13-210ENST00000428626 SBSNQ6UWP8 590 aa14.61□□□□□ -0.07
SEC13-210ENST00000428626 GFRALQ6UXV0 394 aa14.61□□□□□ -0.07
SEC13-210ENST00000428626 KIAA0408Q6ZU52 694 aa14.61□□□□□ -0.07
SEC13-210ENST00000428626 GALNT7Q86SF2 657 aa14.61□□□□□ -0.07
SEC13-210ENST00000428626 TICAM1Q8IUC6 712 aa14.61□□□□□ -0.07
SEC13-210ENST00000428626 CRLF3Q8IUI8 442 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms