RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 BRIX1Q8TDN6 353 aaKnown RBP17.42■□□□□ 0.38
PSPC1-202ENST00000427943 SLC13A3Q8WWT9 602 aa17.42■□□□□ 0.38
PSPC1-202ENST00000427943 TSNARE1Q96NA8 513 aa17.42■□□□□ 0.38
PSPC1-202ENST00000427943 RBCK1Q9BYM8 510 aa17.42■□□□□ 0.38
PSPC1-202ENST00000427943 VN1R1Q9GZP7 353 aa17.42■□□□□ 0.38
PSPC1-202ENST00000427943 SPNS1Q9H2V7 528 aa17.42■□□□□ 0.38
PSPC1-202ENST00000427943 ANKHQ9HCJ1 492 aa17.42■□□□□ 0.38
PSPC1-202ENST00000427943 SMYD2Q9NRG4 433 aa17.42■□□□□ 0.38
PSPC1-202ENST00000427943 RIC8BQ9NVN3 520 aa17.42■□□□□ 0.38
PSPC1-202ENST00000427943 MOCS1Q9NZB8 636 aa17.42■□□□□ 0.38
PSPC1-202ENST00000427943 PTGFRNQ9P2B2 879 aa17.42■□□□□ 0.38
PSPC1-202ENST00000427943 COPG1Q9Y678 874 aaKnown RBP17.42■□□□□ 0.38
PSPC1-202ENST00000427943 ICE1Q9Y2F5 2266 aa17.41■□□□□ 0.38
PSPC1-202ENST00000427943 SPTAN1Q13813 2472 aaKnown RBP17.41■□□□□ 0.38
PSPC1-202ENST00000427943 A0A1W2PQ72 361 aa17.41■□□□□ 0.38
PSPC1-202ENST00000427943 ZNF860A6NHJ4 632 aa17.41■□□□□ 0.38
PSPC1-202ENST00000427943 RAD51CO43502 376 aa17.41■□□□□ 0.38
PSPC1-202ENST00000427943 SEMA7AO75326 666 aa17.41■□□□□ 0.38
PSPC1-202ENST00000427943 RDH16O75452 317 aa17.41■□□□□ 0.38
PSPC1-202ENST00000427943 UQCRHP07919 91 aa17.41■□□□□ 0.38
PSPC1-202ENST00000427943 ENO2P09104 434 aaPredicted RBP17.41■□□□□ 0.38
PSPC1-202ENST00000427943 SLC35G6P0C7Q6 338 aa17.41■□□□□ 0.38
PSPC1-202ENST00000427943 C8orf89P0DMQ9 161 aa17.41■□□□□ 0.38
PSPC1-202ENST00000427943 XCR1P46094 333 aa17.41■□□□□ 0.38
PSPC1-202ENST00000427943 MINDY4Q4G0A6 757 aa17.41■□□□□ 0.38
PSPC1-202ENST00000427943 LANCL3Q6ZV70 420 aa17.41■□□□□ 0.38
PSPC1-202ENST00000427943 PDSS2Q86YH6 399 aa17.41■□□□□ 0.38
PSPC1-202ENST00000427943 ZNF740Q8NDX6 193 aa17.41■□□□□ 0.38
PSPC1-202ENST00000427943 OR51Q1Q8NH59 317 aa17.41■□□□□ 0.38
PSPC1-202ENST00000427943 PRR7Q8TB68 274 aa17.41■□□□□ 0.38
PSPC1-202ENST00000427943 ATL1Q8WXF7 558 aa17.41■□□□□ 0.38
PSPC1-202ENST00000427943 NEIL2Q969S2 332 aa17.41■□□□□ 0.38
PSPC1-202ENST00000427943 MOCOSQ96EN8 888 aa17.41■□□□□ 0.38
PSPC1-202ENST00000427943 SAYSD1Q9NPB0 183 aa17.41■□□□□ 0.38
PSPC1-202ENST00000427943 SVILO95425 2214 aa17.4■□□□□ 0.38
PSPC1-202ENST00000427943 LOC102723996A0A087X1L8 192 aa17.4■□□□□ 0.38
PSPC1-202ENST00000427943 IGHV3-20A0A0C4DH32 117 aa17.4■□□□□ 0.38
PSPC1-202ENST00000427943 OR2W5A6NFC9 320 aa17.4■□□□□ 0.38
PSPC1-202ENST00000427943 FAM187AA6NFU0 413 aa17.4■□□□□ 0.38
PSPC1-202ENST00000427943 NDUFS4O43181 175 aa17.4■□□□□ 0.38
PSPC1-202ENST00000427943 OR1F1O43749 312 aa17.4■□□□□ 0.38
PSPC1-202ENST00000427943 SERPINA7P05543 415 aa17.4■□□□□ 0.38
PSPC1-202ENST00000427943 SERPIND1P05546 499 aa17.4■□□□□ 0.38
PSPC1-202ENST00000427943 RNF224P0DH78 156 aa17.4■□□□□ 0.38
PSPC1-202ENST00000427943 SSTR1P30872 391 aa17.4■□□□□ 0.38
PSPC1-202ENST00000427943 CDC16Q13042 620 aa17.4■□□□□ 0.38
PSPC1-202ENST00000427943 CALCOCO2Q13137 446 aa17.4■□□□□ 0.38
PSPC1-202ENST00000427943 ZNF169Q14929 603 aaPredicted RBP17.4■□□□□ 0.38
PSPC1-202ENST00000427943 TMEM205Q6UW68 189 aa17.4■□□□□ 0.38
PSPC1-202ENST00000427943 CEP97Q8IW35 865 aa17.4■□□□□ 0.38
PSPC1-202ENST00000427943 NKAPQ8N5F7 415 aaKnown RBP17.4■□□□□ 0.38
PSPC1-202ENST00000427943 BBOF1Q8ND07 529 aa17.4■□□□□ 0.38
PSPC1-202ENST00000427943 CATSPER1Q8NEC5 780 aa17.4■□□□□ 0.38
PSPC1-202ENST00000427943 SPATA4Q8NEY3 305 aa17.4■□□□□ 0.38
PSPC1-202ENST00000427943 ABHD11Q8NFV4 315 aa17.4■□□□□ 0.38
PSPC1-202ENST00000427943 ANKRD49Q8WVL7 239 aa17.4■□□□□ 0.38
PSPC1-202ENST00000427943 PSMF1Q92530 271 aa17.4■□□□□ 0.38
PSPC1-202ENST00000427943 PDLIM5Q96HC4 596 aaKnown RBP17.4■□□□□ 0.38
PSPC1-202ENST00000427943 VPS39Q96JC1 886 aa17.4■□□□□ 0.38
PSPC1-202ENST00000427943 ERP44Q9BS26 406 aa17.4■□□□□ 0.38
PSPC1-202ENST00000427943 UNKQ9C0B0 810 aaKnown RBP17.4■□□□□ 0.38
PSPC1-202ENST00000427943 ZNF700Q9H0M5 742 aa17.4■□□□□ 0.38
PSPC1-202ENST00000427943 RHOJQ9H4E5 214 aa17.4■□□□□ 0.38
PSPC1-202ENST00000427943 NAALAD2Q9Y3Q0 740 aa17.4■□□□□ 0.38
PSPC1-202ENST00000427943 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.4■□□□□ 0.38
PSPC1-202ENST00000427943 ZGRF1Q86YA3 2104 aa17.39■□□□□ 0.38
PSPC1-202ENST00000427943 SPTBN1Q01082 2364 aaKnown RBP17.39■□□□□ 0.38
PSPC1-202ENST00000427943 TRBC2A0A5B9 178 aa17.39■□□□□ 0.37
PSPC1-202ENST00000427943 NDC80O14777 642 aa17.39■□□□□ 0.37
PSPC1-202ENST00000427943 ITGAMP11215 1152 aa17.39■□□□□ 0.37
PSPC1-202ENST00000427943 SOX11P35716 441 aa17.39■□□□□ 0.37
PSPC1-202ENST00000427943 CSHL1Q14406 222 aa17.39■□□□□ 0.37
PSPC1-202ENST00000427943 B3GNTL1Q67FW5 361 aaPredicted RBP17.39■□□□□ 0.37
PSPC1-202ENST00000427943 TMPRSS11BQ86T26 416 aa17.39■□□□□ 0.37
PSPC1-202ENST00000427943 THOC6Q86W42 341 aaKnown RBP17.39■□□□□ 0.37
PSPC1-202ENST00000427943 OR4K1Q8NGD4 311 aa17.39■□□□□ 0.37
PSPC1-202ENST00000427943 PYROXD1Q8WU10 500 aa17.39■□□□□ 0.37
PSPC1-202ENST00000427943 SLC5A11Q8WWX8 675 aa17.39■□□□□ 0.37
PSPC1-202ENST00000427943 METTL21AQ8WXB1 218 aa17.39■□□□□ 0.37
PSPC1-202ENST00000427943 PSMG3-AS1Q96PY0 264 aa17.39■□□□□ 0.37
PSPC1-202ENST00000427943 EGFL8Q99944 293 aa17.39■□□□□ 0.37
PSPC1-202ENST00000427943 LRRC4CQ9HCJ2 640 aa17.39■□□□□ 0.37
PSPC1-202ENST00000427943 NSMCE4AQ9NXX6 385 aa17.39■□□□□ 0.37
PSPC1-202ENST00000427943 PLA2G3Q9NZ20 509 aa17.39■□□□□ 0.37
PSPC1-202ENST00000427943 GRHL1Q9NZI5 618 aa17.39■□□□□ 0.37
PSPC1-202ENST00000427943 WHRNQ9P202 907 aa17.39■□□□□ 0.37
PSPC1-202ENST00000427943 DYRK1BQ9Y463 629 aa17.39■□□□□ 0.37
PSPC1-202ENST00000427943 CXorf49A8MYA2 514 aaPredicted RBP17.38■□□□□ 0.37
PSPC1-202ENST00000427943 PCDH17O14917 1159 aa17.38■□□□□ 0.37
PSPC1-202ENST00000427943 SEC24DO94855 1032 aaPredicted RBP17.38■□□□□ 0.37
PSPC1-202ENST00000427943 CBX6O95503 412 aa17.38■□□□□ 0.37
PSPC1-202ENST00000427943 B3GALT4O96024 378 aa17.38■□□□□ 0.37
PSPC1-202ENST00000427943 F10P00742 488 aa17.38■□□□□ 0.37
PSPC1-202ENST00000427943 CASQ1P31415 396 aa17.38■□□□□ 0.37
PSPC1-202ENST00000427943 TSFMP43897 325 aaKnown RBP17.38■□□□□ 0.37
PSPC1-202ENST00000427943 ARG2P78540 354 aa17.38■□□□□ 0.37
PSPC1-202ENST00000427943 TLR1Q15399 786 aa17.38■□□□□ 0.37
PSPC1-202ENST00000427943 TSNQ15631 228 aaKnown RBP17.38■□□□□ 0.37
PSPC1-202ENST00000427943 C18orf21Q32NC0 220 aaPredicted RBP17.38■□□□□ 0.37
PSPC1-202ENST00000427943 FRA10AC1Q70Z53 315 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms