RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 RBM48Q5RL73 367 aaKnown RBP11.19□□□□□ -0.62
FIRRE-201ENST00000427391 GRHL2Q6ISB3 625 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 SHQ1Q6PI26 577 aaKnown RBP11.19□□□□□ -0.62
FIRRE-201ENST00000427391 MAMSTRQ6ZN01 415 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 B3GNT8Q7Z7M8 397 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 SERPINA11Q86U17 422 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 HIPK1Q86Z02 1210 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 PIK3C3Q8NEB9 887 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 ZNF420Q8TAQ5 688 aaPredicted RBP11.19□□□□□ -0.62
FIRRE-201ENST00000427391 FUNDC2Q9BWH2 189 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 PRDM8Q9NQV8 689 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 DOCK9Q9BZ29 2069 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 CCDC88CQ9P219 2028 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 GCM2O75603 506 aaPredicted RBP11.19□□□□□ -0.62
FIRRE-201ENST00000427391 AP2A2O94973 939 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 ANGPTL1O95841 491 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 FABP3P05413 133 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 ETFAP13804 333 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 HOXA9P31269 272 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 OR1E2P47887 323 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 GP2P55259 537 aaKnown RBP11.19□□□□□ -0.62
FIRRE-201ENST00000427391 SLBPQ14493 270 aaKnown RBP eCLIP11.19□□□□□ -0.62
FIRRE-201ENST00000427391 TTC23LQ6PF05 361 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 DHRS4L2Q6PKH6 230 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 SLCO4C1Q6ZQN7 724 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 GPR155Q7Z3F1 870 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 HORMAD1Q86X24 394 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 CCDC71Q8IV32 467 aaPredicted RBP11.19□□□□□ -0.62
FIRRE-201ENST00000427391 OR8J2Q8NGG1 315 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 RDH12Q96NR8 316 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 GPATCH2Q9NW75 528 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 PCDHB11Q9Y5F2 797 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 ORC6Q9Y5N6 252 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 CFAP20Q9Y6A4 193 aaKnown RBP11.19□□□□□ -0.62
FIRRE-201ENST00000427391 NUMA1Q14980 2115 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 TMEM229AB2RXF0 380 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 H0YIV9 168 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 ZNF701M0R085 212 aaPredicted RBP11.19□□□□□ -0.62
FIRRE-201ENST00000427391 SH3BP5O60239 455 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 C1orf105O95561 183 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 NPPBP16860 134 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 ZNF8P17098 575 aaPredicted RBP11.19□□□□□ -0.62
FIRRE-201ENST00000427391 GSTM2P28161 218 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 RAD23AP54725 363 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 EPHA5P54756 1037 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 NFE2L1Q14494 772 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 MYBPC3Q14896 1274 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 RAET1GQ6H3X3 334 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 CCDC81Q6ZN84 652 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 NEK10Q6ZWH5 1172 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 TRMT11Q7Z4G4 463 aaKnown RBP11.19□□□□□ -0.62
FIRRE-201ENST00000427391 ATG16L2Q8NAA4 619 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 OR4A15Q8NGL6 344 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 OR56A3Q8NH54 315 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 DNAJB8Q8NHS0 232 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 FAM81AQ8TBF8 368 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 GLMNQ92990 594 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 ARRDC3Q96B67 414 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 NODALQ96S42 347 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 TRIM39Q9HCM9 518 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 FAM120CQ9NX05 1096 aaKnown RBP11.19□□□□□ -0.62
FIRRE-201ENST00000427391 TMEM98Q9Y2Y6 226 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 CORINQ9Y5Q5 1042 aa11.19□□□□□ -0.62
FIRRE-201ENST00000427391 MTCL1Q9Y4B5 1905 aaKnown RBP11.18□□□□□ -0.62
FIRRE-201ENST00000427391 NPIPB8E9PQR5 432 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 NOL3O60936 208 aaKnown RBP11.18□□□□□ -0.62
FIRRE-201ENST00000427391 CISD3P0C7P0 127 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 JUNBP17275 347 aaPredicted RBP11.18□□□□□ -0.62
FIRRE-201ENST00000427391 TTKP33981 857 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 CRATP43155 626 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 HBA1P69905 142 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 EMX1Q04741 257 aaPredicted RBP11.18□□□□□ -0.62
FIRRE-201ENST00000427391 CAMK1Q14012 370 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 DGCR6Q14129 220 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 SLC16A12Q6ZSM3 486 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 KIAA0907Q7Z7F0 614 aaPredicted RBP11.18□□□□□ -0.62
FIRRE-201ENST00000427391 ZNF547Q8IVP9 402 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 NPAS3Q8IXF0 933 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 OR52J3Q8NH60 311 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 CHTF18Q8WVB6 975 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 BAG5Q9UL15 447 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 AP3M1Q9Y2T2 418 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 TESMINQ9Y4I5 508 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 C1orf226A1L170 272 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 TOR1BO14657 336 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 PFDN1O60925 122 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 MYO1DO94832 1006 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 C6orf47O95873 294 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 MYOGP15173 224 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 PCMT1P22061 227 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 CD6P30203 668 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 HNF4AP41235 474 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 BMXP51813 675 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 GRSF1Q12849 480 aaKnown RBP eCLIP11.18□□□□□ -0.62
FIRRE-201ENST00000427391 RGNQ15493 299 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 MPEG1Q2M385 716 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 PRSS36Q5K4E3 855 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 C1orf53Q5VUE5 145 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 KDM4DQ6B0I6 523 aa11.18□□□□□ -0.62
FIRRE-201ENST00000427391 FAM83HQ6ZRV2 1179 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms