RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 H0YIV9 168 aa14.69□□□□□ -0.06
C9orf3-204ENST00000424143 RNASET2O00584 256 aaKnown RBP14.69□□□□□ -0.06
C9orf3-204ENST00000424143 SCAMP2O15127 329 aaKnown RBP14.69□□□□□ -0.06
C9orf3-204ENST00000424143 KMOO15229 486 aa14.69□□□□□ -0.06
C9orf3-204ENST00000424143 ZW10O43264 779 aa14.69□□□□□ -0.06
C9orf3-204ENST00000424143 DBTP11182 482 aaKnown RBP14.69□□□□□ -0.06
C9orf3-204ENST00000424143 COX7A2P14406 83 aa14.69□□□□□ -0.06
C9orf3-204ENST00000424143 CHMP24386 653 aa14.69□□□□□ -0.06
C9orf3-204ENST00000424143 C21orf33P30042 268 aaPredicted RBP14.69□□□□□ -0.06
C9orf3-204ENST00000424143 HNF4AP41235 474 aa14.69□□□□□ -0.06
C9orf3-204ENST00000424143 CRYBA2P53672 197 aa14.69□□□□□ -0.06
C9orf3-204ENST00000424143 E2F2Q14209 437 aa14.69□□□□□ -0.06
C9orf3-204ENST00000424143 RGNQ15493 299 aa14.69□□□□□ -0.06
C9orf3-204ENST00000424143 ZXDCQ2QGD7 858 aaPredicted RBP14.69□□□□□ -0.06
C9orf3-204ENST00000424143 IFI44LQ53G44 452 aa14.69□□□□□ -0.06
C9orf3-204ENST00000424143 ARMCX4Q5H9R4 360 aa14.69□□□□□ -0.06
C9orf3-204ENST00000424143 SLC8B1Q6J4K2 584 aa14.69□□□□□ -0.06
C9orf3-204ENST00000424143 FAM92BQ6ZTR7 304 aa14.69□□□□□ -0.06
C9orf3-204ENST00000424143 KRT73Q86Y46 540 aa14.69□□□□□ -0.06
C9orf3-204ENST00000424143 RASAL3Q86YV0 1011 aa14.69□□□□□ -0.06
C9orf3-204ENST00000424143 SLC30A8Q8IWU4 369 aa14.69□□□□□ -0.06
C9orf3-204ENST00000424143 PCSK9Q8NBP7 692 aaKnown RBP14.69□□□□□ -0.06
C9orf3-204ENST00000424143 OR10G2Q8NGC3 310 aa14.69□□□□□ -0.06
C9orf3-204ENST00000424143 HTRA1Q92743 480 aa14.69□□□□□ -0.06
C9orf3-204ENST00000424143 COPS8Q99627 209 aa14.69□□□□□ -0.06
C9orf3-204ENST00000424143 DUSP26Q9BV47 211 aa14.69□□□□□ -0.06
C9orf3-204ENST00000424143 C2orf49Q9BVC5 232 aaPredicted RBP14.69□□□□□ -0.06
C9orf3-204ENST00000424143 YIPF2Q9BWQ6 316 aa14.69□□□□□ -0.06
C9orf3-204ENST00000424143 C6orf62Q9GZU0 229 aaPredicted RBP14.69□□□□□ -0.06
C9orf3-204ENST00000424143 TMEM38AQ9H6F2 299 aa14.69□□□□□ -0.06
C9orf3-204ENST00000424143 CCDC177Q9NQR7 707 aaPredicted RBP14.69□□□□□ -0.06
C9orf3-204ENST00000424143 FZD4Q9ULV1 537 aa14.69□□□□□ -0.06
C9orf3-204ENST00000424143 VPS4AQ9UN37 437 aa14.69□□□□□ -0.06
C9orf3-204ENST00000424143 BACE2Q9Y5Z0 518 aa14.69□□□□□ -0.06
C9orf3-204ENST00000424143 PLXNB3Q9ULL4 1909 aa14.68□□□□□ -0.06
C9orf3-204ENST00000424143 CAPN5O15484 640 aaPredicted RBP14.68□□□□□ -0.06
C9orf3-204ENST00000424143 DIRAS1O95057 198 aa14.68□□□□□ -0.06
C9orf3-204ENST00000424143 HMGA1P17096 107 aaKnown RBP14.68□□□□□ -0.06
C9orf3-204ENST00000424143 MZF1P28698 734 aaPredicted RBP14.68□□□□□ -0.06
C9orf3-204ENST00000424143 RRM2P31350 389 aa14.68□□□□□ -0.06
C9orf3-204ENST00000424143 CCR7P32248 378 aa14.68□□□□□ -0.06
C9orf3-204ENST00000424143 LIMS1P48059 325 aa14.68□□□□□ -0.06
C9orf3-204ENST00000424143 ARPP19P56211 112 aa14.68□□□□□ -0.06
C9orf3-204ENST00000424143 RHAGQ02094 409 aa14.68□□□□□ -0.06
C9orf3-204ENST00000424143 TAF1CQ15572 869 aaPredicted RBP14.68□□□□□ -0.06
C9orf3-204ENST00000424143 KCNA10Q16322 511 aa14.68□□□□□ -0.06
C9orf3-204ENST00000424143 PTCHD3Q3KNS1 767 aa14.68□□□□□ -0.06
C9orf3-204ENST00000424143 LINGO4Q6UY18 593 aa14.68□□□□□ -0.06
C9orf3-204ENST00000424143 TPRG1Q6ZUI0 275 aa14.68□□□□□ -0.06
C9orf3-204ENST00000424143 CCDC103Q8IW40 242 aa14.68□□□□□ -0.06
C9orf3-204ENST00000424143 UBQLNLQ8IYU4 475 aa14.68□□□□□ -0.06
C9orf3-204ENST00000424143 STX19Q8N4C7 294 aa14.68□□□□□ -0.06
C9orf3-204ENST00000424143 IL17RCQ8NAC3 791 aa14.68□□□□□ -0.06
C9orf3-204ENST00000424143 EGLN2Q96KS0 407 aa14.68□□□□□ -0.06
C9orf3-204ENST00000424143 WDFY2Q96P53 400 aa14.68□□□□□ -0.06
C9orf3-204ENST00000424143 TRNT1Q96Q11 434 aaKnown RBP14.68□□□□□ -0.06
C9orf3-204ENST00000424143 FEVQ99581 238 aa14.68□□□□□ -0.06
C9orf3-204ENST00000424143 FAM83CQ9BQN1 747 aa14.68□□□□□ -0.06
C9orf3-204ENST00000424143 TAPBPLQ9BX59 468 aa14.68□□□□□ -0.06
C9orf3-204ENST00000424143 BHLHE41Q9C0J9 482 aaPredicted RBP14.68□□□□□ -0.06
C9orf3-204ENST00000424143 NUAK2Q9H093 628 aa14.68□□□□□ -0.06
C9orf3-204ENST00000424143 RUBCNLQ9H714 662 aa14.68□□□□□ -0.06
C9orf3-204ENST00000424143 NEK6Q9HC98 313 aa14.68□□□□□ -0.06
C9orf3-204ENST00000424143 ATP6V1HQ9UI12 483 aa14.68□□□□□ -0.06
C9orf3-204ENST00000424143 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.68□□□□□ -0.06
C9orf3-204ENST00000424143 TLL1O43897 1013 aa14.67□□□□□ -0.06
C9orf3-204ENST00000424143 PRAMEF4O60810 478 aa14.67□□□□□ -0.06
C9orf3-204ENST00000424143 GCM2O75603 506 aaPredicted RBP14.67□□□□□ -0.06
C9orf3-204ENST00000424143 CLDN7O95471 211 aa14.67□□□□□ -0.06
C9orf3-204ENST00000424143 IFNA14P01570 189 aa14.67□□□□□ -0.06
C9orf3-204ENST00000424143 SPNP16150 400 aa14.67□□□□□ -0.06
C9orf3-204ENST00000424143 GRK5P34947 590 aa14.67□□□□□ -0.06
C9orf3-204ENST00000424143 BMPR1AP36894 532 aa14.67□□□□□ -0.06
C9orf3-204ENST00000424143 SLC15A1P46059 708 aa14.67□□□□□ -0.06
C9orf3-204ENST00000424143 RPS5P46782 204 aaKnown RBP14.67□□□□□ -0.06
C9orf3-204ENST00000424143 NEK2P51955 445 aa14.67□□□□□ -0.06
C9orf3-204ENST00000424143 FCHO2Q0JRZ9 810 aa14.67□□□□□ -0.06
C9orf3-204ENST00000424143 STARD3Q14849 445 aa14.67□□□□□ -0.06
C9orf3-204ENST00000424143 CLPPQ16740 277 aaPredicted RBP14.67□□□□□ -0.06
C9orf3-204ENST00000424143 ATXN7L2Q5T6C5 722 aaPredicted RBP14.67□□□□□ -0.06
C9orf3-204ENST00000424143 CPTPQ5TA50 214 aa14.67□□□□□ -0.06
C9orf3-204ENST00000424143 PRAMEF9Q5VWM5 478 aa14.67□□□□□ -0.06
C9orf3-204ENST00000424143 MEDAGQ5VYS4 303 aa14.67□□□□□ -0.06
C9orf3-204ENST00000424143 THOC7Q6I9Y2 204 aaKnown RBP14.67□□□□□ -0.06
C9orf3-204ENST00000424143 GRHL2Q6ISB3 625 aa14.67□□□□□ -0.06
C9orf3-204ENST00000424143 GPR153Q6NV75 609 aa14.67□□□□□ -0.06
C9orf3-204ENST00000424143 MBOAT1Q6ZNC8 495 aa14.67□□□□□ -0.06
C9orf3-204ENST00000424143 SLC5A8Q8N695 610 aa14.67□□□□□ -0.06
C9orf3-204ENST00000424143 FAM83FQ8NEG4 500 aaPredicted RBP14.67□□□□□ -0.06
C9orf3-204ENST00000424143 KCNC2Q96PR1 638 aa14.67□□□□□ -0.06
C9orf3-204ENST00000424143 TTPALQ9BTX7 342 aa14.67□□□□□ -0.06
C9orf3-204ENST00000424143 TPK1Q9H3S4 243 aa14.67□□□□□ -0.06
C9orf3-204ENST00000424143 TRPV5Q9NQA5 729 aa14.67□□□□□ -0.06
C9orf3-204ENST00000424143 DYRK4Q9NR20 520 aa14.67□□□□□ -0.06
C9orf3-204ENST00000424143 FBXL12Q9NXK8 326 aa14.67□□□□□ -0.06
C9orf3-204ENST00000424143 EHD3Q9NZN3 535 aa14.67□□□□□ -0.06
C9orf3-204ENST00000424143 NDOR1Q9UHB4 597 aa14.67□□□□□ -0.06
C9orf3-204ENST00000424143 TSR3Q9UJK0 312 aaKnown RBP14.67□□□□□ -0.06
C9orf3-204ENST00000424143 FCF1Q9Y324 198 aaKnown RBP14.67□□□□□ -0.06
C9orf3-204ENST00000424143 A0A1W2PQ67 120 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms