RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 CAMK1DQ8IU85 385 aa4.53□□□□□ -1.68
CDC42EP3-202ENST00000422687 APLFQ8IW19 511 aaPredicted RBP4.53□□□□□ -1.68
CDC42EP3-202ENST00000422687 CCDC13Q8IYE1 715 aa4.53□□□□□ -1.68
CDC42EP3-202ENST00000422687 CCDC89Q8N998 374 aa4.53□□□□□ -1.68
CDC42EP3-202ENST00000422687 GLMPQ8WWB7 406 aa4.53□□□□□ -1.68
CDC42EP3-202ENST00000422687 PATE1Q8WXA2 126 aa4.53□□□□□ -1.68
CDC42EP3-202ENST00000422687 RXFP2Q8WXD0 754 aa4.53□□□□□ -1.68
CDC42EP3-202ENST00000422687 STARD8Q92502 1023 aa4.53□□□□□ -1.68
CDC42EP3-202ENST00000422687 KIAA1143Q96AT1 154 aaPredicted RBP4.53□□□□□ -1.68
CDC42EP3-202ENST00000422687 VPS50Q96JG6 964 aa4.53□□□□□ -1.68
CDC42EP3-202ENST00000422687 NSMCE3Q96MG7 304 aa4.53□□□□□ -1.68
CDC42EP3-202ENST00000422687 PRR25Q96S07 402 aa4.53□□□□□ -1.68
CDC42EP3-202ENST00000422687 SERINC2Q96SA4 455 aa4.53□□□□□ -1.68
CDC42EP3-202ENST00000422687 EIF3CQ99613 913 aaKnown RBP4.53□□□□□ -1.68
CDC42EP3-202ENST00000422687 GSDMCQ9BYG8 508 aa4.53□□□□□ -1.68
CDC42EP3-202ENST00000422687 LRRC19Q9H756 370 aa4.53□□□□□ -1.68
CDC42EP3-202ENST00000422687 WDR26Q9H7D7 661 aa4.53□□□□□ -1.68
CDC42EP3-202ENST00000422687 MLXIPLQ9NP71 852 aa4.53□□□□□ -1.68
CDC42EP3-202ENST00000422687 KLC4Q9NSK0 619 aa4.53□□□□□ -1.68
CDC42EP3-202ENST00000422687 KCTD5Q9NXV2 234 aa4.53□□□□□ -1.68
CDC42EP3-202ENST00000422687 DNAJC12Q9UKB3 198 aa4.53□□□□□ -1.68
CDC42EP3-202ENST00000422687 RAB21Q9UL25 225 aa4.53□□□□□ -1.68
CDC42EP3-202ENST00000422687 ATP6V1DQ9Y5K8 247 aa4.53□□□□□ -1.68
CDC42EP3-202ENST00000422687 POLEQ07864 2286 aa4.53□□□□□ -1.68
CDC42EP3-202ENST00000422687 NIPBLQ6KC79 2804 aaeCLIP4.53□□□□□ -1.68
CDC42EP3-202ENST00000422687 F8P00451 2351 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 DYTNA2CJ06 578 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 AGAP5A6NIR3 686 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 GOLGA8SH3BPF8 625 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 MKRN2OSH3BPM6 223 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 J3KR12 359 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 STK17BO94768 372 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 SORBS2O94875 1100 aaKnown RBP4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 FGFR1OPO95684 399 aaKnown RBP4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 SOD1P00441 154 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 MBPP02686 304 aaPredicted RBP4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 ANKRD34CP0C6C1 535 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 ELFN1P0C7U0 828 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 ACP5P13686 325 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 TCN2P20062 427 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 NR1D1P20393 614 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 GNLYP22749 145 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 AK4P27144 223 aaPredicted RBP4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 EPHB2P29323 1055 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 SDC4P31431 198 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 NDST2P52849 883 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 PMS2P54278 862 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 STX17P56962 302 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 TAS2R50P59544 299 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 CDK3Q00526 305 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 DPTQ07507 201 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 PTP4A2Q12974 167 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 TP53BP2Q13625 1128 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 PTPRRQ15256 657 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 TSTQ16762 297 aaKnown RBP4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 C15orf59Q2T9L4 293 aaPredicted RBP4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 C2CD6Q53TS8 623 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 ATP1A1-AS1Q5TC04 95 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 PAPD7Q5XG87 772 aaKnown RBP4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 ISM2Q6H9L7 571 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 KLHL10Q6JEL2 608 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 ASB18Q6ZVZ8 466 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 H1FNTQ75WM6 255 aaPredicted RBP4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 RHOUQ7L0Q8 258 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 ARMC8Q8IUR7 673 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 HSCBQ8IWL3 235 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 PYROXD2Q8N2H3 581 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 SFRP1Q8N474 314 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 CCDC185Q8N715 623 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 EMC1Q8N766 993 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 OR52L2PQ8NGH6 319 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 JOSD2Q8TAC2 188 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 IL17DQ8TAD2 202 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 GPT2Q8TD30 523 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 DVL3Q92997 716 aaPredicted RBP4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 RFKQ969G6 155 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 PTCD3Q96EY7 689 aaKnown RBP4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 DTD2Q96FN9 168 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 PBKQ96KB5 322 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 C8orf49Q96NF6 230 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 CDCP1Q9H5V8 836 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 ATP13A3Q9H7F0 1226 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 SYNPO2LQ9H987 977 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 SAP30LQ9HAJ7 183 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 APMAPQ9HDC9 416 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 PHPT1Q9NRX4 125 aaPredicted RBP4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 SLC22A11Q9NSA0 550 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 TBCCD1Q9NVR7 557 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 EHD3Q9NZN3 535 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 UBA2Q9UBT2 640 aaPredicted RBP4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 HOOK1Q9UJC3 728 aaKnown RBP4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 NOCTQ9UK39 431 aaKnown RBP4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 TLK1Q9UKI8 766 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 SUFUQ9UMX1 484 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 TCAF1Q9Y4C2 921 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 CACNA1DQ01668 2161 aa4.52□□□□□ -1.69
CDC42EP3-202ENST00000422687 MED13Q9UHV7 2174 aa4.51□□□□□ -1.69
CDC42EP3-202ENST00000422687 SHANK1Q9Y566 2161 aa4.51□□□□□ -1.69
CDC42EP3-202ENST00000422687 MN1Q10571 1320 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms