RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 MNAT1P51948 309 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 NEK2P51955 445 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 YBX1P67809 324 aaKnown RBP13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 SF3A3Q12874 501 aaKnown RBP eCLIP13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 KLF10Q13118 480 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 DEPDC1Q5TB30 811 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 TMEM198Q66K66 360 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 NXNQ6DKJ4 435 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 ARMC6Q6NXE6 501 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 FBXO42Q6P3S6 717 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 FIGLAQ6QHK4 219 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 RNF44Q7L0R7 432 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 METTL4Q8N3J2 472 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 FNDC5Q8NAU1 212 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 ZNF740Q8NDX6 193 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 OR10G6Q8NH81 332 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 RP9Q8TA86 221 aaKnown RBP13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 TM4SF19Q96DZ7 209 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 ZDHHC12Q96GR4 267 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 OR2A5Q96R48 311 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 MS4A8Q9BY19 250 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 IL21RQ9HBE5 538 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 EVA1BQ9NVM1 165 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 AHSPQ9NZD4 102 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 ADAM29Q9UKF5 820 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 SLC12A4Q9UP95 1085 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 MAPRE3Q9UPY8 281 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 EIF3LQ9Y262 564 aaKnown RBP13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 RUVBL1Q9Y265 456 aaKnown RBP13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 U3KQA8 63 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 MN1Q10571 1320 aaPredicted RBP13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 MED19A0JLT2 244 aaPredicted RBP13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 GSAPA4D1B5 854 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 ANKRD28O15084 1053 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 LCMT2O60294 686 aaKnown RBP13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 PRMT3O60678 531 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 UNC5CO95185 931 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 T-ENOLP0DO92 83 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 THRAP10827 490 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 CKMT1AP12532 417 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 JAK1P23458 1154 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 STX1BP61266 288 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 HMGCS1Q01581 520 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 MAPRE2Q15555 327 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 PROX2Q3B8N5 592 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 INAVAQ3KP66 663 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 COQ5Q5HYK3 327 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 STPG1Q5TH74 334 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 FCRL6Q6DN72 434 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 CCDC121Q6ZUS5 278 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 KMT5CQ86Y97 462 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 PLXDC1Q8IUK5 500 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 MIER2Q8N344 545 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 GLB1L3Q8NCI6 653 aaPredicted RBP13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 SRFBP1Q8NEF9 429 aaKnown RBP13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 NT5CQ8TCD5 201 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 TCTN2Q96GX1 697 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 PPP1R36Q96LQ0 422 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 APOLD1Q96LR9 279 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 MTERF1Q99551 399 aaKnown RBP13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 C1orf21Q9H246 121 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 PDP2Q9P2J9 529 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 CAPN7Q9Y6W3 813 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 DCDC2BA2VCK2 349 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 LRIT2A6NDA9 550 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 TLCD2A6NGC4 264 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 PSMD12O00232 456 aaPredicted RBP13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 HAT1O14929 419 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 B4GAT1O43505 415 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 OR1F1O43749 312 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 DUX1O43812 170 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 SRPX2O60687 465 aaPredicted RBP13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 SEC22BO75396 215 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 UBOX5O94941 541 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 PCNAP12004 261 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 BCL6P41182 706 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 RASSF2P50749 326 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 DUSP3P51452 185 aaPredicted RBP13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 DIO3P55073 304 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 RPS13P62277 151 aaKnown RBP13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 BIRC2Q13490 618 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 RBBP5Q15291 538 aaKnown RBP13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 CCDC6Q16204 474 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 CACHD1Q5VU97 1274 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 KHDRBS2Q5VWX1 349 aaKnown RBP13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 NOXRED1Q6NXP6 359 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 SCIMPQ6UWF3 145 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 SPRED1Q7Z699 444 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 TREML1Q86YW5 311 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 JPH3Q8WXH2 748 aaPredicted RBP13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 APIPQ96GX9 242 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 PRR11Q96HE9 360 aaPredicted RBP13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 NSL1Q96IY1 281 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 ZNF285Q96NJ3 590 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 TMEM74Q96NL1 305 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 CATSPER2Q96P56 530 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 TRAPPC9Q96Q05 1148 aa13.64□□□□□ -0.23
SHMT1P1-201ENST00000419974 ZFYVE21Q9BQ24 234 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms