RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 FAM129AQ9BZQ8 928 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 PLAC1Q9HBJ0 212 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 PLA2G3Q9NZ20 509 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 RNF14Q9UBS8 474 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 SH2B3Q9UQQ2 575 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 VWA7Q9Y334 891 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 A1L4Q6 167 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 PABPN1LA6NDY0 278 aaKnown RBP8.92□□□□□ -0.98
NUP50-205ENST00000419387 SGK494L7N484 410 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 JRKO75564 520 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 TSPAN12O95859 305 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 UQCRHP07919 91 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 CELA2AP08217 269 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 CYC1P08574 325 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 C8orf89P0DMQ9 161 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 ITGAMP11215 1152 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 CDH1P12830 882 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 EDN3P14138 238 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 IL1RNP18510 177 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 ELK3P41970 407 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 XCR1P46094 333 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 TNFSF10P50591 281 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 EFNA3P52797 238 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 AP1S2P56377 157 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 ZXDCQ2QGD7 858 aaPredicted RBP8.92□□□□□ -0.98
NUP50-205ENST00000419387 HP1BP3Q5SSJ5 553 aaPredicted RBP8.92□□□□□ -0.98
NUP50-205ENST00000419387 MFSD4BQ5TF39 518 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 HECTD2Q5U5R9 776 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 DUPD1Q68J44 220 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 FAM45BPQ6NSW5 357 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 HIBCHQ6NVY1 386 aaPredicted RBP8.92□□□□□ -0.98
NUP50-205ENST00000419387 FAM180AQ6UWF9 173 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 PRSS41Q7RTY9 318 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 CPEB2Q7Z5Q1 589 aaKnown RBP8.92□□□□□ -0.98
NUP50-205ENST00000419387 PACS2Q86VP3 889 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 KLHL7Q8IXQ5 586 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 GPATCH11Q8N954 259 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 MFSD9Q8NBP5 474 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 KCT2Q8NC54 265 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 SPATA4Q8NEY3 305 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 ABHD11Q8NFV4 315 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 FAM45AQ8TCE6 357 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 ATL1Q8WXF7 558 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 LRRC39Q96DD0 335 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 CFAP36Q96G28 342 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 SNF8Q96H20 258 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 PWWP2AQ96N64 755 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 TRIM54Q9BYV2 358 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 VN1R1Q9GZP7 353 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 ANKHQ9HCJ1 492 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 ARL15Q9NXU5 204 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 HCN3Q9P1Z3 774 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 SLC17A6Q9P2U8 582 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 C19orf25Q9UFG5 118 aaPredicted RBP8.92□□□□□ -0.98
NUP50-205ENST00000419387 CORO1CQ9ULV4 474 aaPredicted RBP8.92□□□□□ -0.98
NUP50-205ENST00000419387 SLC22A7Q9Y694 548 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 TEX264Q9Y6I9 313 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 CNTRLQ7Z7A1 2325 aa8.92□□□□□ -0.98
NUP50-205ENST00000419387 TRAV17A0A0B4J275 112 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 E2F3O00716 465 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 CLDN1O95832 211 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 WDPCPO95876 746 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 ENO2P09104 434 aaPredicted RBP8.91□□□□□ -0.98
NUP50-205ENST00000419387 SLC35G6P0C7Q6 338 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 CCR8P51685 355 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 PGGT1BP53609 377 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 ITGA8P53708 1063 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 ARL4CP56559 192 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 DR1Q01658 176 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 FRG1Q14331 258 aaKnown RBP8.91□□□□□ -0.98
NUP50-205ENST00000419387 MINDY4Q4G0A6 757 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 STEAP4Q687X5 459 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 TRMT10BQ6PF06 316 aaKnown RBP8.91□□□□□ -0.98
NUP50-205ENST00000419387 LANCL3Q6ZV70 420 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 MAMDC2Q7Z304 686 aaPredicted RBP8.91□□□□□ -0.98
NUP50-205ENST00000419387 SHISA5Q8N114 240 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 AMER2Q8N7J2 671 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 BCORP1Q8N888 145 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 OR4K1Q8NGD4 311 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 OR56A3Q8NH54 315 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 ZCCHC10Q8TBK6 192 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 PYCR2Q96C36 320 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 FBXL8Q96CD0 374 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 TRIM44Q96DX7 344 aaPredicted RBP8.91□□□□□ -0.98
NUP50-205ENST00000419387 PDLIM5Q96HC4 596 aaKnown RBP8.91□□□□□ -0.98
NUP50-205ENST00000419387 MAGEB10Q96LZ2 347 aaPredicted RBP8.91□□□□□ -0.98
NUP50-205ENST00000419387 OLFM1Q99784 485 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 SARGQ9BW04 601 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 RNF32Q9H0A6 362 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.91□□□□□ -0.98
NUP50-205ENST00000419387 OLAHQ9NV23 265 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 STMN3Q9NZ72 180 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 CHMP2BQ9UQN3 213 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 OSGIN2Q9Y236 505 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 SPTAN1Q13813 2472 aaKnown RBP8.91□□□□□ -0.98
NUP50-205ENST00000419387 HIVEP3Q5T1R4 2406 aa8.91□□□□□ -0.98
NUP50-205ENST00000419387 SPTBN1Q01082 2364 aaKnown RBP8.91□□□□□ -0.98
NUP50-205ENST00000419387 PRRC2CQ9Y520 2896 aaKnown RBP8.9□□□□□ -0.98
NUP50-205ENST00000419387 IGHV3-20A0A0C4DH32 117 aa8.9□□□□□ -0.98
NUP50-205ENST00000419387 OR2W5A6NFC9 320 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms