RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 SEMA3DO95025 777 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 RCBTB2O95199 551 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 OAS1P00973 400 aaKnown RBP10.89□□□□□ -0.67
PTCH1-205ENST00000418258 H1F0P07305 194 aaKnown RBP10.89□□□□□ -0.67
PTCH1-205ENST00000418258 SRCP12931 536 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 RAB8AP61006 207 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 CREB5Q02930 508 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 ST3GAL4Q11206 333 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 ADGRE1Q14246 886 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 CA9Q16790 459 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 TNFRSF10DQ9UBN6 386 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 LOXHD1Q8IVV2 1947 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 EFCAB9A8MZ26 197 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 HMGN1P05114 100 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 CCDC107Q8WV48 283 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 LRRC3Q9BY71 257 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 PAK6Q9NQU5 681 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-205ENST00000418258 TAS2R9Q9NYW1 312 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 B4GALT7Q9UBV7 327 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 ZNF221Q9UK13 617 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 ACSL5Q9ULC5 683 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 PCDHGA2Q9Y5H1 932 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 C2orf92A0A1B0GVN3 265 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 GALTP07902 379 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 CFHP08603 1231 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 FBLP22087 321 aaKnown RBP10.89□□□□□ -0.67
PTCH1-205ENST00000418258 GADD45AP24522 165 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 TPRG1Q6ZUI0 275 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 MON2Q7Z3U7 1717 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 MFSD2AQ8NA29 543 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 RNF39Q9H2S5 420 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 SMOC2Q9H3U7 446 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 SLC17A6Q9P2U8 582 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 MRC1P22897 1456 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 A0A1W2PRQ8 180 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 PGLSO95336 258 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 FARS2O95363 451 aaKnown RBP10.88□□□□□ -0.67
PTCH1-205ENST00000418258 LRRC69Q6ZNQ3 347 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 USP43Q70EL4 1123 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 DCUN1D3Q8IWE4 304 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 ASB6Q9NWX5 421 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 METTL21EPA6NDL7 271 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 OR2AT4A6NND4 320 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 RNF225M0QZC1 329 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-205ENST00000418258 MAP2K7O14733 419 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 DUX1O43812 170 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 AHSA1O95433 338 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 RAB36O95755 333 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 SOD2P04179 222 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 SRPRAP08240 638 aaKnown RBP10.88□□□□□ -0.67
PTCH1-205ENST00000418258 GDF10P55107 478 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 SYT16Q17RD7 645 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 NIPAL1Q6NVV3 410 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 TRMT10BQ6PF06 316 aaKnown RBP10.88□□□□□ -0.67
PTCH1-205ENST00000418258 TNFRSF25Q93038 417 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 IL4I1Q96RQ9 567 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 FAM83CQ9BQN1 747 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 FARSAQ9Y285 508 aaKnown RBP10.88□□□□□ -0.67
PTCH1-205ENST00000418258 CIB4A0PJX0 185 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 HTR3EA5X5Y0 456 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 E2F3O00716 465 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 VNN1O95497 513 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 IFNA21P01568 189 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 CDH1P12830 882 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 HK1P19367 917 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 PTNP21246 168 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 LBX1P52954 281 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 TIGD6Q17RP2 521 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 FLYWCH1Q4VC44 716 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 RAB11FIP2Q7L804 512 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 ZNF461Q8TAF7 563 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 KCNJ9Q92806 393 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 DNAJA3Q96EY1 480 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 ERMAPQ96PL5 475 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-205ENST00000418258 GATA5Q9BWX5 397 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-205ENST00000418258 ACTL8Q9H568 366 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 A0A1W2PP55 124 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 ZSCAN5BA6NJL1 495 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 PAK4O96013 591 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-205ENST00000418258 PVALBP20472 110 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-205ENST00000418258 IMPDH1P20839 514 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 FAM189A2Q15884 450 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 PLEKHG6Q3KR16 790 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 OR1F2PQ96R84 312 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 RAB28P51157 221 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 CDK10Q15131 360 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 PAMR1Q6UXH9 720 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 CCDC120Q96HB5 630 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 RHOP08100 348 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 TMEM115Q12893 351 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-205ENST00000418258 LASP1Q14847 261 aaKnown RBP10.88□□□□□ -0.67
PTCH1-205ENST00000418258 MAD2L1BPQ15013 274 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-205ENST00000418258 MS4A13Q5J8X5 152 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 CARD17Q5XLA6 110 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 OR8H1Q8NGG4 311 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 OR56A1Q8NGH5 318 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 SLC6A15Q9H2J7 730 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 ANKRA2Q9H9E1 313 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 TRPV4Q9HBA0 871 aa10.88□□□□□ -0.67
PTCH1-205ENST00000418258 C14orf105Q9NVL8 296 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms