RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 C17orf107Q6ZR85 190 aa19.73■□□□□ 0.75
AP1S3-205ENST00000415298 CLEC4FQ8N1N0 589 aa19.73■□□□□ 0.75
AP1S3-205ENST00000415298 KREMEN2Q8NCW0 462 aa19.73■□□□□ 0.75
AP1S3-205ENST00000415298 DEPDC1BQ8WUY9 529 aa19.73■□□□□ 0.75
AP1S3-205ENST00000415298 DPYSL5Q9BPU6 564 aa19.73■□□□□ 0.75
AP1S3-205ENST00000415298 NDRG3Q9UGV2 375 aa19.73■□□□□ 0.75
AP1S3-205ENST00000415298 INSL5Q9Y5Q6 135 aa19.73■□□□□ 0.75
AP1S3-205ENST00000415298 A0A0U1RQS6 177 aa19.72■□□□□ 0.75
AP1S3-205ENST00000415298 PCDHGA12O60330 932 aa19.72■□□□□ 0.75
AP1S3-205ENST00000415298 EDARADDQ8WWZ3 215 aa19.72■□□□□ 0.75
AP1S3-205ENST00000415298 STON2Q8WXE9 905 aa19.72■□□□□ 0.75
AP1S3-205ENST00000415298 HEXA-AS1Q9H8Q6 139 aa19.72■□□□□ 0.75
AP1S3-205ENST00000415298 CASS4Q9NQ75 786 aa19.72■□□□□ 0.75
AP1S3-205ENST00000415298 CACNA2D2Q9NY47 1150 aa19.72■□□□□ 0.75
AP1S3-205ENST00000415298 A0A1W2PQH9 124 aa19.72■□□□□ 0.75
AP1S3-205ENST00000415298 TERTO14746 1132 aaKnown RBP19.72■□□□□ 0.75
AP1S3-205ENST00000415298 PDE9AO76083 593 aa19.72■□□□□ 0.75
AP1S3-205ENST00000415298 PROSCO94903 275 aa19.72■□□□□ 0.75
AP1S3-205ENST00000415298 PAPSS2O95340 614 aaPredicted RBP19.72■□□□□ 0.75
AP1S3-205ENST00000415298 GLUD1P00367 558 aa19.72■□□□□ 0.75
AP1S3-205ENST00000415298 ALPLP05186 524 aa19.72■□□□□ 0.75
AP1S3-205ENST00000415298 S100A9P06702 114 aaKnown RBP19.72■□□□□ 0.75
AP1S3-205ENST00000415298 ACAA1P09110 424 aaPredicted RBP19.72■□□□□ 0.75
AP1S3-205ENST00000415298 TCF3P15923 654 aa19.72■□□□□ 0.75
AP1S3-205ENST00000415298 HMGA1P17096 107 aaKnown RBP19.72■□□□□ 0.75
AP1S3-205ENST00000415298 YWHAQP27348 245 aa19.72■□□□□ 0.75
AP1S3-205ENST00000415298 PGDP52209 483 aa19.72■□□□□ 0.75
AP1S3-205ENST00000415298 EXOSC2Q13868 293 aaKnown RBP19.72■□□□□ 0.75
AP1S3-205ENST00000415298 PTPRRQ15256 657 aa19.72■□□□□ 0.75
AP1S3-205ENST00000415298 CTU2Q2VPK5 515 aaKnown RBP19.72■□□□□ 0.75
AP1S3-205ENST00000415298 TXNRD3NBQ6F5E7 133 aa19.72■□□□□ 0.75
AP1S3-205ENST00000415298 PCNPQ8WW12 178 aaKnown RBP19.72■□□□□ 0.75
AP1S3-205ENST00000415298 FAM126AQ9BYI3 521 aaPredicted RBP19.72■□□□□ 0.75
AP1S3-205ENST00000415298 EXTL2Q9UBQ6 330 aa19.72■□□□□ 0.75
AP1S3-205ENST00000415298 DSCR3O14972 297 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 BRINP1O60477 761 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 LTFP02788 710 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 C8AP07357 584 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 ZNF806P0C7X5 589 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 THRBP10828 461 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 CD36P16671 472 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 AGXTP21549 392 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 GPD1P21695 349 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 RAB25P57735 213 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 TAS2R40P59535 323 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 SPCS3P61009 180 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 PSPHP78330 225 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 SMAD3P84022 425 aaKnown RBP19.71■□□□□ 0.75
AP1S3-205ENST00000415298 CHAF1BQ13112 559 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 FGL2Q14314 439 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 FLYWCH1Q4VC44 716 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 ATP13A4Q4VNC1 1196 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 TEX30Q5JUR7 227 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 GLYATQ6IB77 296 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 STRA8Q7Z7C7 330 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 KBTBD8Q8NFY9 601 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 NSMAFQ92636 917 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 AURKBQ96GD4 344 aaPredicted RBP19.71■□□□□ 0.75
AP1S3-205ENST00000415298 SORCS2Q96PQ0 1159 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 PTDSS2Q9BVG9 487 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 REG4Q9BYZ8 158 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 SDHAF2Q9NX18 166 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 CMTM6Q9NX76 183 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 FBXW11Q9UKB1 542 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 MYO16Q9Y6X6 1858 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 SYNJ2BP-COX16A0A087WUM0 186 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 TUBAL3A6NHL2 446 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 GPIP06744 558 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 TIE1P35590 1138 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 EPS8Q12929 822 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 TRAM2Q15035 370 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 ZNF697Q5TEC3 545 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 TMEM198Q66K66 360 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 TBPL2Q6SJ96 375 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 IL17RCQ8NAC3 791 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 ASB15Q8WXK1 588 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 FBXO32Q969P5 355 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 OR5M11Q96RB7 305 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 SLC30A2Q9BRI3 323 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 SORBS1Q9BX66 1292 aaKnown RBP19.71■□□□□ 0.75
AP1S3-205ENST00000415298 POPDC2Q9HBU9 364 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 THUMPD1Q9NXG2 353 aaKnown RBP19.71■□□□□ 0.75
AP1S3-205ENST00000415298 USE1Q9NZ43 259 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 COX16Q9P0S2 106 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 DCDC2Q9UHG0 476 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 ADAM30Q9UKF2 790 aa19.71■□□□□ 0.75
AP1S3-205ENST00000415298 PRRC2BQ5JSZ5 2229 aaKnown RBP19.71■□□□□ 0.74
AP1S3-205ENST00000415298 A0A0G2JPF8 293 aa19.7■□□□□ 0.74
AP1S3-205ENST00000415298 HNRNPCL3B7ZW38 293 aa19.7■□□□□ 0.74
AP1S3-205ENST00000415298 DFFAO00273 331 aa19.7■□□□□ 0.74
AP1S3-205ENST00000415298 EIF3GO75821 320 aaKnown RBP eCLIP19.7■□□□□ 0.74
AP1S3-205ENST00000415298 LDLRP01130 860 aa19.7■□□□□ 0.74
AP1S3-205ENST00000415298 LTA4HP09960 611 aaKnown RBP19.7■□□□□ 0.74
AP1S3-205ENST00000415298 H2AFB1P0C5Y9 115 aa19.7■□□□□ 0.74
AP1S3-205ENST00000415298 H2AFB2P0C5Z0 115 aa19.7■□□□□ 0.74
AP1S3-205ENST00000415298 HNRNPCL4P0DMR1 293 aa19.7■□□□□ 0.74
AP1S3-205ENST00000415298 SPAM1P38567 509 aa19.7■□□□□ 0.74
AP1S3-205ENST00000415298 ALDH3A2P51648 485 aa19.7■□□□□ 0.74
AP1S3-205ENST00000415298 ZNF143P52747 638 aaPredicted RBP19.7■□□□□ 0.74
AP1S3-205ENST00000415298 HYAL2Q12891 473 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms