RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 NSDHLQ15738 373 aa18.21■□□□□ 0.51
UBXN4-202ENST00000415164 EXT1Q16394 746 aa18.21■□□□□ 0.51
UBXN4-202ENST00000415164 ANKRD22Q5VYY1 191 aa18.21■□□□□ 0.51
UBXN4-202ENST00000415164 ZNF549Q6P9A3 640 aa18.21■□□□□ 0.51
UBXN4-202ENST00000415164 DRICH1Q6PGQ1 229 aaPredicted RBP18.21■□□□□ 0.51
UBXN4-202ENST00000415164 MBOAT1Q6ZNC8 495 aa18.21■□□□□ 0.51
UBXN4-202ENST00000415164 GALNTL5Q7Z4T8 443 aa18.21■□□□□ 0.51
UBXN4-202ENST00000415164 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.21■□□□□ 0.51
UBXN4-202ENST00000415164 ASPGQ86U10 573 aa18.21■□□□□ 0.51
UBXN4-202ENST00000415164 SPPL2CQ8IUH8 684 aa18.21■□□□□ 0.51
UBXN4-202ENST00000415164 LRRC56Q8IYG6 542 aaPredicted RBP18.21■□□□□ 0.51
UBXN4-202ENST00000415164 SLC5A8Q8N695 610 aa18.21■□□□□ 0.51
UBXN4-202ENST00000415164 TMEM178AQ8NBL3 297 aa18.21■□□□□ 0.51
UBXN4-202ENST00000415164 KCT2Q8NC54 265 aa18.21■□□□□ 0.51
UBXN4-202ENST00000415164 FAM98AQ8NCA5 519 aaKnown RBP18.21■□□□□ 0.51
UBXN4-202ENST00000415164 FBXO15Q8NCQ5 510 aaPredicted RBP18.21■□□□□ 0.51
UBXN4-202ENST00000415164 MDS2Q8NDY4 140 aa18.21■□□□□ 0.51
UBXN4-202ENST00000415164 TSLPQ969D9 159 aa18.21■□□□□ 0.51
UBXN4-202ENST00000415164 MTFMTQ96DP5 389 aaKnown RBP18.21■□□□□ 0.51
UBXN4-202ENST00000415164 TRIM8Q9BZR9 551 aa18.21■□□□□ 0.51
UBXN4-202ENST00000415164 ATG10Q9H0Y0 220 aa18.21■□□□□ 0.51
UBXN4-202ENST00000415164 SH2B3Q9UQQ2 575 aa18.21■□□□□ 0.51
UBXN4-202ENST00000415164 NAALAD2Q9Y3Q0 740 aa18.21■□□□□ 0.51
UBXN4-202ENST00000415164 KIF5CO60282 957 aa18.2■□□□□ 0.5
UBXN4-202ENST00000415164 CLDN14O95500 239 aa18.2■□□□□ 0.5
UBXN4-202ENST00000415164 SERPIND1P05546 499 aa18.2■□□□□ 0.5
UBXN4-202ENST00000415164 HRH2P25021 359 aa18.2■□□□□ 0.5
UBXN4-202ENST00000415164 SLC1A2P43004 574 aa18.2■□□□□ 0.5
UBXN4-202ENST00000415164 OR4D2P58180 307 aa18.2■□□□□ 0.5
UBXN4-202ENST00000415164 HSF1Q00613 529 aa18.2■□□□□ 0.5
UBXN4-202ENST00000415164 MAPKAPK3Q16644 382 aa18.2■□□□□ 0.5
UBXN4-202ENST00000415164 TMEM214Q6NUQ4 689 aaKnown RBP18.2■□□□□ 0.5
UBXN4-202ENST00000415164 C3P1Q6ZMU1 363 aa18.2■□□□□ 0.5
UBXN4-202ENST00000415164 SLC26A11Q86WA9 606 aa18.2■□□□□ 0.5
UBXN4-202ENST00000415164 C17orf64Q86WR6 236 aa18.2■□□□□ 0.5
UBXN4-202ENST00000415164 CEP97Q8IW35 865 aa18.2■□□□□ 0.5
UBXN4-202ENST00000415164 M1APQ8TC57 530 aa18.2■□□□□ 0.5
UBXN4-202ENST00000415164 SLC13A3Q8WWT9 602 aa18.2■□□□□ 0.5
UBXN4-202ENST00000415164 KCNJ9Q92806 393 aa18.2■□□□□ 0.5
UBXN4-202ENST00000415164 CCDC138Q96M89 665 aa18.2■□□□□ 0.5
UBXN4-202ENST00000415164 LPAR4Q99677 370 aa18.2■□□□□ 0.5
UBXN4-202ENST00000415164 NPAS2Q99743 824 aa18.2■□□□□ 0.5
UBXN4-202ENST00000415164 CDCP1Q9H5V8 836 aa18.2■□□□□ 0.5
UBXN4-202ENST00000415164 GPAMQ9HCL2 828 aa18.2■□□□□ 0.5
UBXN4-202ENST00000415164 LZTFL1Q9NQ48 299 aa18.2■□□□□ 0.5
UBXN4-202ENST00000415164 C20orf96Q9NUD7 363 aaPredicted RBP18.2■□□□□ 0.5
UBXN4-202ENST00000415164 ZKSCAN5Q9Y2L8 839 aa18.2■□□□□ 0.5
UBXN4-202ENST00000415164 DHRS7Q9Y394 339 aa18.2■□□□□ 0.5
UBXN4-202ENST00000415164 MAD1L1Q9Y6D9 718 aa18.2■□□□□ 0.5
UBXN4-202ENST00000415164 GFYI3L273 518 aa18.19■□□□□ 0.5
UBXN4-202ENST00000415164 NDC80O14777 642 aa18.19■□□□□ 0.5
UBXN4-202ENST00000415164 CYC1P08574 325 aa18.19■□□□□ 0.5
UBXN4-202ENST00000415164 SLC35G6P0C7Q6 338 aa18.19■□□□□ 0.5
UBXN4-202ENST00000415164 CDH1P12830 882 aa18.19■□□□□ 0.5
UBXN4-202ENST00000415164 CXCR5P32302 372 aa18.19■□□□□ 0.5
UBXN4-202ENST00000415164 GRK3P35626 688 aa18.19■□□□□ 0.5
UBXN4-202ENST00000415164 SKIV2L2P42285 1042 aaKnown RBP18.19■□□□□ 0.5
UBXN4-202ENST00000415164 RIPPLY3P57055 190 aa18.19■□□□□ 0.5
UBXN4-202ENST00000415164 CSNK1G2P78368 415 aa18.19■□□□□ 0.5
UBXN4-202ENST00000415164 MPP1Q00013 466 aa18.19■□□□□ 0.5
UBXN4-202ENST00000415164 CDSNQ15517 529 aa18.19■□□□□ 0.5
UBXN4-202ENST00000415164 KRTCAP3Q53RY4 240 aa18.19■□□□□ 0.5
UBXN4-202ENST00000415164 CAPN13Q6MZZ7 669 aaPredicted RBP18.19■□□□□ 0.5
UBXN4-202ENST00000415164 H3F3CQ6NXT2 135 aa18.19■□□□□ 0.5
UBXN4-202ENST00000415164 CYHR1Q6ZMK1 362 aa18.19■□□□□ 0.5
UBXN4-202ENST00000415164 PDSS2Q86YH6 399 aa18.19■□□□□ 0.5
UBXN4-202ENST00000415164 PALM2Q8IXS6 379 aa18.19■□□□□ 0.5
UBXN4-202ENST00000415164 CYP4X1Q8N118 509 aa18.19■□□□□ 0.5
UBXN4-202ENST00000415164 HORMAD2Q8N7B1 307 aa18.19■□□□□ 0.5
UBXN4-202ENST00000415164 OR5T3Q8NGG3 340 aa18.19■□□□□ 0.5
UBXN4-202ENST00000415164 CD200R1Q8TD46 325 aa18.19■□□□□ 0.5
UBXN4-202ENST00000415164 THAP3Q8WTV1 239 aaPredicted RBP18.19■□□□□ 0.5
UBXN4-202ENST00000415164 FRMD6Q96NE9 622 aa18.19■□□□□ 0.5
UBXN4-202ENST00000415164 MMP25Q9NPA2 562 aa18.19■□□□□ 0.5
UBXN4-202ENST00000415164 LRFN1Q9P244 771 aa18.19■□□□□ 0.5
UBXN4-202ENST00000415164 TRMT6Q9UJA5 497 aaKnown RBP18.19■□□□□ 0.5
UBXN4-202ENST00000415164 MED16Q9Y2X0 877 aa18.19■□□□□ 0.5
UBXN4-202ENST00000415164 MEMO1Q9Y316 297 aa18.19■□□□□ 0.5
UBXN4-202ENST00000415164 SP1P08047 785 aa18.18■□□□□ 0.5
UBXN4-202ENST00000415164 OLR1P78380 273 aa18.18■□□□□ 0.5
UBXN4-202ENST00000415164 MEF2AQ02078 507 aaPredicted RBP18.18■□□□□ 0.5
UBXN4-202ENST00000415164 NAE1Q13564 534 aa18.18■□□□□ 0.5
UBXN4-202ENST00000415164 USP10Q14694 798 aaKnown RBP18.18■□□□□ 0.5
UBXN4-202ENST00000415164 SLC25A25Q6KCM7 469 aa18.18■□□□□ 0.5
UBXN4-202ENST00000415164 CAND1Q86VP6 1230 aaKnown RBP18.18■□□□□ 0.5
UBXN4-202ENST00000415164 ADAMTS18Q8TE60 1221 aa18.18■□□□□ 0.5
UBXN4-202ENST00000415164 AGAP11Q8TF27 550 aa18.18■□□□□ 0.5
UBXN4-202ENST00000415164 THAP11Q96EK4 314 aa18.18■□□□□ 0.5
UBXN4-202ENST00000415164 SCMH1Q96GD3 660 aa18.18■□□□□ 0.5
UBXN4-202ENST00000415164 NDNQ99608 321 aa18.18■□□□□ 0.5
UBXN4-202ENST00000415164 PCBD2Q9H0N5 130 aa18.18■□□□□ 0.5
UBXN4-202ENST00000415164 KLHL42Q9P2K6 505 aa18.18■□□□□ 0.5
UBXN4-202ENST00000415164 ADAMTS6Q9UKP5 1117 aa18.18■□□□□ 0.5
UBXN4-202ENST00000415164 PCDHGB6Q9Y5F9 930 aa18.18■□□□□ 0.5
UBXN4-202ENST00000415164 KCNE1BA0A087WTH5 132 aa18.17■□□□□ 0.5
UBXN4-202ENST00000415164 FAM237BA0A1B0GVD1 139 aa18.17■□□□□ 0.5
UBXN4-202ENST00000415164 PABPN1LA6NDY0 278 aaKnown RBP18.17■□□□□ 0.5
UBXN4-202ENST00000415164 SDR42E2A6NKP2 422 aa18.17■□□□□ 0.5
UBXN4-202ENST00000415164 GOLGA6L6A8MZA4 724 aa18.17■□□□□ 0.5
UBXN4-202ENST00000415164 NDUFS4O43181 175 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms