RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 PRMT2P55345 433 aa15.31■□□□□ 0.04
HOXD3-202ENST00000410016 RPP38P78345 283 aaKnown RBP15.31■□□□□ 0.04
HOXD3-202ENST00000410016 CREMQ03060 361 aa15.31■□□□□ 0.04
HOXD3-202ENST00000410016 KCNC4Q03721 635 aa15.31■□□□□ 0.04
HOXD3-202ENST00000410016 NPRL3Q12980 569 aa15.31■□□□□ 0.04
HOXD3-202ENST00000410016 CLCA4Q14CN2 919 aa15.31■□□□□ 0.04
HOXD3-202ENST00000410016 HKDC1Q2TB90 917 aa15.31■□□□□ 0.04
HOXD3-202ENST00000410016 CCDC149Q6ZUS6 474 aa15.31■□□□□ 0.04
HOXD3-202ENST00000410016 BTLAQ7Z6A9 289 aa15.31■□□□□ 0.04
HOXD3-202ENST00000410016 KIAA0907Q7Z7F0 614 aaPredicted RBP15.31■□□□□ 0.04
HOXD3-202ENST00000410016 FAM124AQ86V42 546 aa15.31■□□□□ 0.04
HOXD3-202ENST00000410016 NAGSQ8N159 534 aa15.31■□□□□ 0.04
HOXD3-202ENST00000410016 ATG16L2Q8NAA4 619 aa15.31■□□□□ 0.04
HOXD3-202ENST00000410016 VMP1Q96GC9 406 aa15.31■□□□□ 0.04
HOXD3-202ENST00000410016 TPD52L3Q96J77 140 aa15.31■□□□□ 0.04
HOXD3-202ENST00000410016 C9P02748 559 aa15.3■□□□□ 0.04
HOXD3-202ENST00000410016 MT-ND2P03891 347 aa15.3■□□□□ 0.04
HOXD3-202ENST00000410016 FUCA1P04066 466 aa15.3■□□□□ 0.04
HOXD3-202ENST00000410016 BDKRB1P46663 353 aa15.3■□□□□ 0.04
HOXD3-202ENST00000410016 PRLHRP49683 370 aa15.3■□□□□ 0.04
HOXD3-202ENST00000410016 MVDP53602 400 aa15.3■□□□□ 0.04
HOXD3-202ENST00000410016 DMC1Q14565 340 aa15.3■□□□□ 0.04
HOXD3-202ENST00000410016 PROX2Q3B8N5 592 aa15.3■□□□□ 0.04
HOXD3-202ENST00000410016 NPAS3Q8IXF0 933 aa15.3■□□□□ 0.04
HOXD3-202ENST00000410016 ZNF540Q8NDQ6 660 aa15.3■□□□□ 0.04
HOXD3-202ENST00000410016 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.3■□□□□ 0.04
HOXD3-202ENST00000410016 CYB5D2Q8WUJ1 264 aa15.3■□□□□ 0.04
HOXD3-202ENST00000410016 NEIL2Q969S2 332 aa15.3■□□□□ 0.04
HOXD3-202ENST00000410016 VPS35Q96QK1 796 aa15.3■□□□□ 0.04
HOXD3-202ENST00000410016 ZNF300Q96RE9 604 aaPredicted RBP15.3■□□□□ 0.04
HOXD3-202ENST00000410016 EPYCQ99645 322 aa15.3■□□□□ 0.04
HOXD3-202ENST00000410016 MTG2Q9H4K7 406 aa15.3■□□□□ 0.04
HOXD3-202ENST00000410016 ACOT13Q9NPJ3 140 aa15.3■□□□□ 0.04
HOXD3-202ENST00000410016 NECTIN3Q9NQS3 549 aa15.3■□□□□ 0.04
HOXD3-202ENST00000410016 SPHK2Q9NRA0 654 aa15.3■□□□□ 0.04
HOXD3-202ENST00000410016 TMEM184CQ9NVA4 438 aa15.3■□□□□ 0.04
HOXD3-202ENST00000410016 VPS4AQ9UN37 437 aa15.3■□□□□ 0.04
HOXD3-202ENST00000410016 QSOX1O00391 747 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 SLC22A1O15245 554 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 PCDH7O60245 1069 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 FKTNO75072 461 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 MOSPD3O75425 235 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 CATP04040 527 aaKnown RBP15.29■□□□□ 0.04
HOXD3-202ENST00000410016 OCM2P0CE71 109 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 OCMP0CE72 109 aaPredicted RBP15.29■□□□□ 0.04
HOXD3-202ENST00000410016 PPM1AP35813 382 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 TMEM115Q12893 351 aaPredicted RBP15.29■□□□□ 0.04
HOXD3-202ENST00000410016 ITGADQ13349 1161 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 ZNF658BQ4V348 819 aaPredicted RBP15.29■□□□□ 0.04
HOXD3-202ENST00000410016 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.29■□□□□ 0.04
HOXD3-202ENST00000410016 SLCO4C1Q6ZQN7 724 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 LINC00299Q6ZSB3 139 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 VPS37AQ8NEZ2 397 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 APH1BQ8WW43 257 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 GLYATL1Q969I3 302 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 CCM2Q9BSQ5 444 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 PADI2Q9Y2J8 665 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 CLDN25C9JDP6 229 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 SUV39H1O43463 412 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 MRPS14O60783 128 aaKnown RBP15.29■□□□□ 0.04
HOXD3-202ENST00000410016 ATG13O75143 517 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 NTRK1P04629 796 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 AQP1P29972 269 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 KRT20P35900 424 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 WDR5P61964 334 aaKnown RBP15.29■□□□□ 0.04
HOXD3-202ENST00000410016 CAMK2GQ13555 558 aaPredicted RBP15.29■□□□□ 0.04
HOXD3-202ENST00000410016 SYTL3Q4VX76 610 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 SPIN4Q56A73 249 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 LY6G5CQ5SRR4 150 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 ANXA8L1Q5VT79 327 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 PRSS48Q7RTY5 328 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 NDNFQ8TB73 568 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 HRASLS5Q96KN8 279 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 DOHHQ9BU89 302 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 ALOXE3Q9BYJ1 711 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 AKIP1Q9NQ31 210 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 RASSF1Q9NS23 344 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 COQ6Q9Y2Z9 468 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 PMF1-BGLAPU3KQ54 211 aa15.29■□□□□ 0.04
HOXD3-202ENST00000410016 PLXNA2O75051 1894 aa15.28■□□□□ 0.04
HOXD3-202ENST00000410016 FUOMA2VDF0 154 aa15.28■□□□□ 0.04
HOXD3-202ENST00000410016 CARNS1A5YM72 827 aa15.28■□□□□ 0.04
HOXD3-202ENST00000410016 RNASET2O00584 256 aaKnown RBP15.28■□□□□ 0.04
HOXD3-202ENST00000410016 RGS10O43665 173 aa15.28■□□□□ 0.04
HOXD3-202ENST00000410016 CXCL14O95715 111 aa15.28■□□□□ 0.04
HOXD3-202ENST00000410016 LINC00271P0C7V0 271 aa15.28■□□□□ 0.04
HOXD3-202ENST00000410016 SYN1P17600 705 aa15.28■□□□□ 0.04
HOXD3-202ENST00000410016 PPIBP23284 216 aaKnown RBP15.28■□□□□ 0.04
HOXD3-202ENST00000410016 TIA1P31483 386 aaKnown RBP eCLIP15.28■□□□□ 0.04
HOXD3-202ENST00000410016 PCGF2P35227 344 aa15.28■□□□□ 0.04
HOXD3-202ENST00000410016 RPS13P62277 151 aaKnown RBP15.28■□□□□ 0.04
HOXD3-202ENST00000410016 ZNF385BQ569K4 471 aa15.28■□□□□ 0.04
HOXD3-202ENST00000410016 SLCO6A1Q86UG4 719 aa15.28■□□□□ 0.04
HOXD3-202ENST00000410016 ENTHD1Q8IYW4 607 aa15.28■□□□□ 0.04
HOXD3-202ENST00000410016 GPR156Q8NFN8 814 aa15.28■□□□□ 0.04
HOXD3-202ENST00000410016 GABARAPL3Q9BY60 117 aa15.28■□□□□ 0.04
HOXD3-202ENST00000410016 RAD18Q9NS91 495 aa15.28■□□□□ 0.04
HOXD3-202ENST00000410016 TDP1Q9NUW8 608 aa15.28■□□□□ 0.04
HOXD3-202ENST00000410016 NDUFAF4Q9P032 175 aa15.28■□□□□ 0.04
HOXD3-202ENST00000410016 KIF17Q9P2E2 1029 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms