RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 SEC16BQ96JE7 1060 aa13.77□□□□□ -0.21
NIF3L1-205ENST00000409588 PWWP2AQ96N64 755 aa13.77□□□□□ -0.21
NIF3L1-205ENST00000409588 OR1F2PQ96R84 312 aa13.77□□□□□ -0.21
NIF3L1-205ENST00000409588 CYTH2Q99418 400 aa13.77□□□□□ -0.21
NIF3L1-205ENST00000409588 OLFM1Q99784 485 aa13.77□□□□□ -0.21
NIF3L1-205ENST00000409588 RAB17Q9H0T7 212 aa13.77□□□□□ -0.21
NIF3L1-205ENST00000409588 ZNF160Q9HCG1 818 aa13.77□□□□□ -0.21
NIF3L1-205ENST00000409588 TEKT2Q9UIF3 430 aa13.77□□□□□ -0.21
NIF3L1-205ENST00000409588 MKL2Q9ULH7 1088 aa13.77□□□□□ -0.21
NIF3L1-205ENST00000409588 PCSK5Q92824 1860 aa13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 FAM95CA0A1B0GW59 222 aa13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 DYTNA2CJ06 578 aa13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 TCP11X1B4DZS4 312 aa13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 P2RX6O15547 441 aa13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 LCMT2O60294 686 aaKnown RBP13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 ALOX12BO75342 701 aa13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 H2AFYO75367 372 aaKnown RBP13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 PRR35P0CG20 571 aa13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 C8orf89P0DMQ9 161 aa13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 COX6A1P12074 109 aa13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 CDH1P12830 882 aa13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 GSTM2P28161 218 aa13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 GLRBP48167 497 aa13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 MEF2AQ02078 507 aaPredicted RBP13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 RGS1Q08116 209 aa13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 C3orf62Q6ZUJ4 267 aa13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 PRSS58Q8IYP2 241 aa13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 TCAIMQ8N3R3 496 aa13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 DTWD1Q8N5C7 304 aa13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 OR9A4Q8NGU2 314 aa13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 SLC5A11Q8WWX8 675 aa13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 ALKBH8Q96BT7 664 aaKnown RBP13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 CPNE1Q99829 537 aa13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 AIF1LQ9BQI0 150 aa13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 WDR83Q9BRX9 315 aaKnown RBP13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 MCMBPQ9BTE3 642 aa13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 PITHD1Q9GZP4 211 aaPredicted RBP13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 SYNPO2LQ9H987 977 aa13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 PELI2Q9HAT8 420 aa13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 GPAMQ9HCL2 828 aa13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 ZFP69BQ9UJL9 534 aa13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 MRPS2Q9Y399 296 aaKnown RBP13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 DYRK1BQ9Y463 629 aa13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 OARD1Q9Y530 152 aa13.76□□□□□ -0.21
NIF3L1-205ENST00000409588 MDC1Q14676 2089 aaKnown RBP13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 OR1F1O43749 312 aa13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 CBX6O95503 412 aa13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 GUCA1CO95843 209 aa13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 DDAH2O95865 285 aa13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 GNAZP19086 355 aa13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 GNLYP22749 145 aa13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 HPDP32754 393 aaPredicted RBP13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 Q0VFX4 171 aa13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 ELOAQ14241 798 aaKnown RBP13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 ZNF169Q14929 603 aaPredicted RBP13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 PPP1R3AQ16821 1122 aa13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 ZXDCQ2QGD7 858 aaPredicted RBP13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 MBOAT1Q6ZNC8 495 aa13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 ABHD13Q7L211 337 aa13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 TMEM151BQ8IW70 566 aa13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 ZC3H7AQ8IWR0 971 aaKnown RBP13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 AFAP1L2Q8N4X5 818 aa13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 CISD2Q8N5K1 135 aaKnown RBP13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 PLPP5Q8NEB5 264 aa13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 TTLQ8NG68 377 aa13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 NT5CQ8TCD5 201 aa13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 PYCR2Q96C36 320 aa13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 IMMP1LQ96LU5 166 aa13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 OR4K3Q96R72 315 aa13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 DERL2Q9GZP9 239 aa13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 RNF32Q9H0A6 362 aa13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 CNOT10Q9H9A5 744 aaKnown RBP13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 ZBTB20Q9HC78 741 aaPredicted RBP13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 MAP10Q9P2G4 905 aa13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 CTNNAL1Q9UBT7 734 aa13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 PSAT1Q9Y617 370 aa13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 COL12A1Q99715 3063 aa13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 RELNP78509 3460 aa13.75□□□□□ -0.21
NIF3L1-205ENST00000409588 NUP210LQ5VU65 1888 aa13.74□□□□□ -0.21
NIF3L1-205ENST00000409588 FEZF1A0PJY2 475 aa13.74□□□□□ -0.21
NIF3L1-205ENST00000409588 AGFG2O95081 481 aa13.74□□□□□ -0.21
NIF3L1-205ENST00000409588 ALOX12P18054 663 aa13.74□□□□□ -0.21
NIF3L1-205ENST00000409588 SAT1P21673 171 aa13.74□□□□□ -0.21
NIF3L1-205ENST00000409588 JAK1P23458 1154 aa13.74□□□□□ -0.21
NIF3L1-205ENST00000409588 XCR1P46094 333 aa13.74□□□□□ -0.21
NIF3L1-205ENST00000409588 SCTRP47872 440 aa13.74□□□□□ -0.21
NIF3L1-205ENST00000409588 TAS2R39P59534 338 aa13.74□□□□□ -0.21
NIF3L1-205ENST00000409588 ATP6V0D1P61421 351 aa13.74□□□□□ -0.21
NIF3L1-205ENST00000409588 INAQ16352 499 aa13.74□□□□□ -0.21
NIF3L1-205ENST00000409588 NXPE4Q6UWF7 544 aa13.74□□□□□ -0.21
NIF3L1-205ENST00000409588 TMEM207Q6UWW9 146 aa13.74□□□□□ -0.21
NIF3L1-205ENST00000409588 ZNF572Q7Z3I7 529 aaPredicted RBP13.74□□□□□ -0.21
NIF3L1-205ENST00000409588 CPEB2Q7Z5Q1 589 aaKnown RBP13.74□□□□□ -0.21
NIF3L1-205ENST00000409588 CUZD1Q86UP6 607 aa13.74□□□□□ -0.21
NIF3L1-205ENST00000409588 THOC6Q86W42 341 aaKnown RBP13.74□□□□□ -0.21
NIF3L1-205ENST00000409588 KLHDC8AQ8IYD2 350 aa13.74□□□□□ -0.21
NIF3L1-205ENST00000409588 KCT2Q8NC54 265 aa13.74□□□□□ -0.21
NIF3L1-205ENST00000409588 PSMF1Q92530 271 aa13.74□□□□□ -0.21
NIF3L1-205ENST00000409588 NEIL2Q969S2 332 aa13.74□□□□□ -0.21
NIF3L1-205ENST00000409588 C8orf44Q96CB5 159 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms