RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 PRAMEF9Q5VWM5 478 aa18.89■□□□□ 0.61
PDLIM2-207ENST00000409417 MLIPQ5VWP3 458 aa18.89■□□□□ 0.61
PDLIM2-207ENST00000409417 TMEM214Q6NUQ4 689 aaKnown RBP18.89■□□□□ 0.61
PDLIM2-207ENST00000409417 SH2D5Q6ZV89 423 aa18.89■□□□□ 0.61
PDLIM2-207ENST00000409417 SYVN1Q86TM6 617 aa18.89■□□□□ 0.61
PDLIM2-207ENST00000409417 KRT78Q8N1N4 520 aa18.89■□□□□ 0.61
PDLIM2-207ENST00000409417 DTWD1Q8N5C7 304 aa18.89■□□□□ 0.61
PDLIM2-207ENST00000409417 ANKRD53Q8N9V6 530 aa18.89■□□□□ 0.61
PDLIM2-207ENST00000409417 FKBP10Q96AY3 582 aa18.89■□□□□ 0.61
PDLIM2-207ENST00000409417 MACROD1Q9BQ69 325 aa18.89■□□□□ 0.61
PDLIM2-207ENST00000409417 ROPN1BQ9BZX4 212 aaPredicted RBP18.89■□□□□ 0.61
PDLIM2-207ENST00000409417 ROPN1Q9HAT0 212 aaPredicted RBP18.89■□□□□ 0.61
PDLIM2-207ENST00000409417 COPG2Q9UBF2 871 aa18.89■□□□□ 0.61
PDLIM2-207ENST00000409417 PADI2Q9Y2J8 665 aa18.89■□□□□ 0.61
PDLIM2-207ENST00000409417 TLDC2A0PJX2 215 aa18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 STX16-NPEPL1H3BU86 382 aa18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 STX16O14662 325 aa18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 NDUFS4O43181 175 aa18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 SMIM24O75264 130 aa18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 KLF7O75840 302 aaPredicted RBP18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 ALBP02768 609 aa18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 SBK3P0C264 359 aa18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 RPS18P62269 152 aaKnown RBP18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 IRF8Q02556 426 aa18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 E2F2Q14209 437 aa18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 SLBPQ14493 270 aaKnown RBP eCLIP18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 RBBP5Q15291 538 aaKnown RBP18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 MRPL14Q6P1L8 145 aaKnown RBP18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 TMIGD1Q6UXZ0 262 aa18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 OVCH1Q7RTY7 1134 aa18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 RIBC1Q8N443 379 aaPredicted RBP18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 METTL27Q8N6F8 245 aaPredicted RBP18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 TEX9Q8N6V9 391 aa18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 PTGR2Q8N8N7 351 aaPredicted RBP18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 TRPV3Q8NET8 790 aa18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 PTCD3Q96EY7 689 aaKnown RBP18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 SEC16BQ96JE7 1060 aa18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 EFCAB11Q9BUY7 163 aa18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 SLC26A1Q9H2B4 701 aa18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 NT5DC2Q9H857 520 aa18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 ZNF304Q9HCX3 659 aa18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 TMEM216Q9P0N5 145 aa18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 DCDC2Q9UHG0 476 aa18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 MAU2Q9Y6X3 613 aa18.88■□□□□ 0.61
PDLIM2-207ENST00000409417 IGSF10Q6WRI0 2623 aa18.87■□□□□ 0.61
PDLIM2-207ENST00000409417 FOXO6A8MYZ6 492 aa18.87■□□□□ 0.61
PDLIM2-207ENST00000409417 FOXS1O43638 330 aa18.87■□□□□ 0.61
PDLIM2-207ENST00000409417 WFS1O76024 890 aa18.87■□□□□ 0.61
PDLIM2-207ENST00000409417 ITGB2P05107 769 aa18.87■□□□□ 0.61
PDLIM2-207ENST00000409417 ATXN8OSP0DMR3 200 aa18.87■□□□□ 0.61
PDLIM2-207ENST00000409417 PRKAR1AP10644 381 aa18.87■□□□□ 0.61
PDLIM2-207ENST00000409417 GSTM2P28161 218 aa18.87■□□□□ 0.61
PDLIM2-207ENST00000409417 CDC20Q12834 499 aa18.87■□□□□ 0.61
PDLIM2-207ENST00000409417 CHIT1Q13231 466 aa18.87■□□□□ 0.61
PDLIM2-207ENST00000409417 DSG2Q14126 1118 aa18.87■□□□□ 0.61
PDLIM2-207ENST00000409417 DOC2AQ14183 400 aa18.87■□□□□ 0.61
PDLIM2-207ENST00000409417 ERV3-1Q14264 604 aa18.87■□□□□ 0.61
PDLIM2-207ENST00000409417 C16orf46Q6P387 395 aa18.87■□□□□ 0.61
PDLIM2-207ENST00000409417 KCT2Q8NC54 265 aa18.87■□□□□ 0.61
PDLIM2-207ENST00000409417 TTLQ8NG68 377 aa18.87■□□□□ 0.61
PDLIM2-207ENST00000409417 COL26A1Q96A83 441 aa18.87■□□□□ 0.61
PDLIM2-207ENST00000409417 PHF21BQ96EK2 531 aa18.87■□□□□ 0.61
PDLIM2-207ENST00000409417 MOCOSQ96EN8 888 aa18.87■□□□□ 0.61
PDLIM2-207ENST00000409417 CATSPER2Q96P56 530 aa18.87■□□□□ 0.61
PDLIM2-207ENST00000409417 MRPS2Q9Y399 296 aaKnown RBP18.87■□□□□ 0.61
PDLIM2-207ENST00000409417 ANGPTL3Q9Y5C1 460 aa18.87■□□□□ 0.61
PDLIM2-207ENST00000409417 SLC22A7Q9Y694 548 aa18.87■□□□□ 0.61
PDLIM2-207ENST00000409417 CNOT3O75175 753 aaKnown RBP18.86■□□□□ 0.61
PDLIM2-207ENST00000409417 SIX3O95343 332 aaPredicted RBP18.86■□□□□ 0.61
PDLIM2-207ENST00000409417 SERPIND1P05546 499 aa18.86■□□□□ 0.61
PDLIM2-207ENST00000409417 CD22P20273 847 aa18.86■□□□□ 0.61
PDLIM2-207ENST00000409417 PIK3CGP48736 1102 aa18.86■□□□□ 0.61
PDLIM2-207ENST00000409417 RHDQ02161 417 aa18.86■□□□□ 0.61
PDLIM2-207ENST00000409417 RGS1Q08116 209 aa18.86■□□□□ 0.61
PDLIM2-207ENST00000409417 LAPTM5Q13571 262 aa18.86■□□□□ 0.61
PDLIM2-207ENST00000409417 PAGE2BQ5JRK9 111 aa18.86■□□□□ 0.61
PDLIM2-207ENST00000409417 FAM69BQ5VUD6 431 aa18.86■□□□□ 0.61
PDLIM2-207ENST00000409417 COX15Q7KZN9 410 aa18.86■□□□□ 0.61
PDLIM2-207ENST00000409417 OR2Y1Q8NGV0 311 aa18.86■□□□□ 0.61
PDLIM2-207ENST00000409417 NT5CQ8TCD5 201 aa18.86■□□□□ 0.61
PDLIM2-207ENST00000409417 TMEM109Q9BVC6 243 aa18.86■□□□□ 0.61
PDLIM2-207ENST00000409417 WDR54Q9H977 334 aa18.86■□□□□ 0.61
PDLIM2-207ENST00000409417 LGALS13Q9UHV8 139 aa18.86■□□□□ 0.61
PDLIM2-207ENST00000409417 PLAAQ9Y263 795 aa18.86■□□□□ 0.61
PDLIM2-207ENST00000409417 A0A0A6YYC8 382 aaPredicted RBP18.85■□□□□ 0.61
PDLIM2-207ENST00000409417 LRRC14BA6NHZ5 514 aa18.85■□□□□ 0.61
PDLIM2-207ENST00000409417 I3L1I5 382 aaPredicted RBP18.85■□□□□ 0.61
PDLIM2-207ENST00000409417 E2F3O00716 465 aa18.85■□□□□ 0.61
PDLIM2-207ENST00000409417 PRPF4O43172 522 aaKnown RBP eCLIP18.85■□□□□ 0.61
PDLIM2-207ENST00000409417 SERPINA6P08185 405 aa18.85■□□□□ 0.61
PDLIM2-207ENST00000409417 KRT4P19013 534 aa18.85■□□□□ 0.61
PDLIM2-207ENST00000409417 EEF1DP29692 281 aaKnown RBP18.85■□□□□ 0.61
PDLIM2-207ENST00000409417 CCT5P48643 541 aa18.85■□□□□ 0.61
PDLIM2-207ENST00000409417 SNRPNP63162 240 aaKnown RBP18.85■□□□□ 0.61
PDLIM2-207ENST00000409417 IL10RAQ13651 578 aa18.85■□□□□ 0.61
PDLIM2-207ENST00000409417 HERC3Q15034 1050 aa18.85■□□□□ 0.61
PDLIM2-207ENST00000409417 UGT8Q16880 541 aa18.85■□□□□ 0.61
PDLIM2-207ENST00000409417 ATP1A1-AS1Q5TC04 95 aa18.85■□□□□ 0.61
PDLIM2-207ENST00000409417 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms