RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 ZNF250P15622 560 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 PFKLP17858 780 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 LAG3P18627 525 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 HK1P19367 917 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 CD9P21926 228 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 BRCC3P46736 316 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 SUOXP51687 545 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 DIO3P55073 304 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 UFM1P61960 85 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 MRPL28Q13084 256 aaKnown RBP10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 ZNF460Q14592 562 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 TATDN3Q17R31 274 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 SLC25A52Q3SY17 297 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 RAP1GAP2Q684P5 730 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 RNF165Q6ZSG1 346 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 TMC8Q8IU68 726 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 P3H2Q8IVL5 708 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 CLDN22Q8N7P3 220 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 VN1R2Q8NFZ6 395 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 RNF34Q969K3 372 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 MARC2Q969Z3 335 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 NTAN1Q96AB6 310 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 PABPC5Q96DU9 382 aaKnown RBP10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 ZFP42Q96MM3 310 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 Q96MT0 163 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 TBCDQ9BTW9 1192 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 VN1R3Q9BXE9 311 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 NFKBIZQ9BYH8 718 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 MMP28Q9H239 520 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 OR51E2Q9H255 320 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 CXCL16Q9H2A7 254 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 HEXA-AS1Q9H8Q6 139 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 PTPRHQ9HD43 1115 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 EMC7Q9NPA0 242 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 LYARQ9NX58 379 aaKnown RBP10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 CNOT2Q9NZN8 540 aaKnown RBP10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 CMAHPQ9Y471 501 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 A8MVJ9 347 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 KRBOX1C9JBD0 128 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 F8W810 466 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 H3BUI4 141 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 PLA2G10O15496 165 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 ORC5O43913 435 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 PCDHGA12O60330 932 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 CREG1O75629 220 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 ANXA9O76027 345 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 CSF3P09919 207 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 ODC1P11926 461 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 MATKP42679 507 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 MAP2K3P46734 347 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 MAPKAPK2P49137 400 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 CDH8P55286 799 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 CYP4F2P78329 520 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 UBE3AQ05086 875 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 CYP4F3Q08477 520 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 SCAPQ12770 1279 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 NPRL3Q12980 569 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 CTBP1Q13363 440 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 KIAA0040Q15053 153 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 HSD17B12Q53GQ0 312 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 NOMO2Q5JPE7 1267 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 C10orf62Q5T681 223 aaPredicted RBP10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 LCN1P1Q5VSP4 162 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 CACHD1Q5VU97 1274 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 RNLSQ5VYX0 342 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 PLPP4Q5VZY2 271 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 SAXO2Q658L1 398 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 OR2T5Q6IEZ7 315 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 NOTUMQ6P988 496 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 GLB1LQ6UWU2 654 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 OVCH2Q7RTZ1 564 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 MRPL10Q7Z7H8 261 aaKnown RBP10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 COMMD7Q86VX2 200 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 TRIM69Q86WT6 500 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 DENND6AQ8IWF6 608 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 ENTHD1Q8IYW4 607 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 SLC39A11Q8N1S5 342 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 FAM86B1Q8N7N1 296 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 ZNF557Q8N988 423 aaPredicted RBP10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 OR52H1Q8NGJ2 320 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 OR2T29Q8NH02 315 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 ENKURQ8TC29 256 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 DNASE1L2Q92874 299 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 RBPMSQ93062 196 aaKnown RBP10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 PHF21BQ96EK2 531 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 MSANTD3Q96H12 275 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 TEX37Q96LM6 180 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 ZNF558Q96NG5 402 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 FCRL5Q96RD9 977 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 SOSTQ9BQB4 213 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 RIBC2Q9H4K1 309 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 ASB7Q9H672 318 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 TRIM45Q9H8W5 580 aaPredicted RBP10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 GKN1Q9NS71 199 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 EXD2Q9NVH0 621 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 SLAMF8Q9P0V8 285 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 ASB4Q9Y574 426 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 ALG5Q9Y673 324 aa10.28□□□□□ -0.76
NIF3L1-204ENST00000409357 SH3D21A4FU49 640 aa10.27□□□□□ -0.77
NIF3L1-204ENST00000409357 ZNF98A6NK75 572 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms