RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 ZCCHC10Q8TBK6 192 aa13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 SELENOMQ8WWX9 145 aa13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 ADAMTS14Q8WXS8 1223 aa13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 RERGQ96A58 199 aaPredicted RBP13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 GRAMD1AQ96CP6 724 aa13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 CMKLR1Q99788 373 aa13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 TRMOQ9BU70 441 aa13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 STRADBQ9C0K7 418 aa13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 ELOVL6Q9H5J4 265 aa13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 SIDT1Q9NXL6 827 aaKnown RBP13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 ANKMY1Q9P2S6 941 aa13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 PLCL2Q9UPR0 1127 aa13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 MRPS2Q9Y399 296 aaKnown RBP13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 TRAF6Q9Y4K3 522 aa13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 ANKDD1BA6NHY2 528 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 UGDHO60701 494 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 MED26O95402 600 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 ETHE1O95571 254 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 TBX6O95947 436 aaPredicted RBP13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 LINC00032P0C843 101 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 SDHBP21912 280 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 CXCR2P25025 360 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 RPS13P62277 151 aaKnown RBP13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 HMGCS1Q01581 520 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 IFT88Q13099 833 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 LAPTM5Q13571 262 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 E2F2Q14209 437 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 GGTA1PQ4G0N0 100 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 ZC3H12BQ5HYM0 836 aaKnown RBP13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 KANK2Q63ZY3 851 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 FRG2Q64ET8 278 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 ASPGQ86U10 573 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 KMT5CQ86Y97 462 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 METTL27Q8N6F8 245 aaPredicted RBP13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 CSNK1A1LQ8N752 337 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 WDR20Q8TBZ3 569 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 SLC13A3Q8WWT9 602 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 ZNF501Q96CX3 271 aaPredicted RBP13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 FRG2BQ96QU4 278 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 AICDAQ9GZX7 198 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 ILKAPQ9H0C8 392 aaPredicted RBP13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 OR51B5Q9H339 312 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 TUBB1Q9H4B7 451 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 KLHL31Q9H511 634 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 RABEP2Q9H5N1 569 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 GIMAP2Q9UG22 337 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 ZFP69BQ9UJL9 534 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 RAP2CQ9Y3L5 183 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 PCDHGA11Q9Y5H2 935 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 DNAJC15Q9Y5T4 150 aa13.46□□□□□ -0.25
CHRNA1-204ENST00000409323 C4orf51C9J302 202 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 H0YIV9 168 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 KLF11O14901 512 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 HGSO14964 777 aaPredicted RBP13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 OR2B3O76000 313 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 ENO1P06733 434 aaKnown RBP13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 VIMP08670 466 aaKnown RBP13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 JMJD7P0C870 316 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 HNRNPH1P31943 449 aaKnown RBP13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 LSP1P33241 339 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 SERPINB5P36952 375 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 RPL14P50914 215 aaKnown RBP13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 PCDH1Q08174 1060 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 NAA25Q14CX7 972 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 TOR1AIP1Q5JTV8 583 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 TMPRSS12Q86WS5 348 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 DDIASQ8IXT1 998 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 LAS2Q8IYD9 372 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 SHISA5Q8N114 240 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 CARFQ8N187 725 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 BMPERQ8N8U9 685 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 RAB3IL1Q8TBN0 382 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 CREB3L4Q8TEY5 395 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 ZNF473Q8WTR7 871 aaKnown RBP13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 TWIST2Q8WVJ9 160 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 F2RL3Q96RI0 385 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 SORBS1Q9BX66 1292 aaKnown RBP13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 DMRT3Q9NQL9 472 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 FGFR1OP2Q9NVK5 253 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 SLC39A1Q9NY26 324 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 SNX6Q9UNH7 406 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 RUVBL1Q9Y265 456 aaKnown RBP13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 STK38LQ9Y2H1 464 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 AP1M2Q9Y6Q5 423 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 SPTBN4Q9H254 2564 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 ATP6AP2A0A1C7CYW4 349 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 PIP5K1BO14986 540 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 ULK1O75385 1050 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 ATP6AP2O75787 350 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 UROSP10746 265 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 CDK4P11802 303 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 ID4P47928 161 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 RAB8AP61006 207 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 NAA20P61599 178 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 GNGT1P63211 74 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 BTKQ06187 659 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 GALNT1Q10472 559 aaPredicted RBP13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 HYAL2Q12891 473 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 PUM1Q14671 1186 aaKnown RBP eCLIP13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 UGT3A2Q3SY77 523 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms