RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 FAM95CA0A1B0GW59 222 aa18.25■□□□□ 0.51
SMARCB1-204ENST00000407422 PABPN1LA6NDY0 278 aaKnown RBP18.25■□□□□ 0.51
SMARCB1-204ENST00000407422 OR2W5A6NFC9 320 aa18.25■□□□□ 0.51
SMARCB1-204ENST00000407422 CBX6O95503 412 aa18.25■□□□□ 0.51
SMARCB1-204ENST00000407422 RNF224P0DH78 156 aa18.25■□□□□ 0.51
SMARCB1-204ENST00000407422 TAS2R39P59534 338 aa18.25■□□□□ 0.51
SMARCB1-204ENST00000407422 MFAP5Q13361 173 aa18.25■□□□□ 0.51
SMARCB1-204ENST00000407422 PCOLCEQ15113 449 aa18.25■□□□□ 0.51
SMARCB1-204ENST00000407422 PPP1R3AQ16821 1122 aa18.25■□□□□ 0.51
SMARCB1-204ENST00000407422 CATSPEREQ5SY80 951 aa18.25■□□□□ 0.51
SMARCB1-204ENST00000407422 TMEM205Q6UW68 189 aa18.25■□□□□ 0.51
SMARCB1-204ENST00000407422 C17orf53Q8N3J3 647 aaPredicted RBP18.25■□□□□ 0.51
SMARCB1-204ENST00000407422 MFSD9Q8NBP5 474 aa18.25■□□□□ 0.51
SMARCB1-204ENST00000407422 CATSPER1Q8NEC5 780 aa18.25■□□□□ 0.51
SMARCB1-204ENST00000407422 OR51Q1Q8NH59 317 aa18.25■□□□□ 0.51
SMARCB1-204ENST00000407422 PRR7Q8TB68 274 aa18.25■□□□□ 0.51
SMARCB1-204ENST00000407422 MOCOSQ96EN8 888 aa18.25■□□□□ 0.51
SMARCB1-204ENST00000407422 VN1R1Q9GZP7 353 aa18.25■□□□□ 0.51
SMARCB1-204ENST00000407422 SMYD2Q9NRG4 433 aa18.25■□□□□ 0.51
SMARCB1-204ENST00000407422 PTGFRNQ9P2B2 879 aa18.25■□□□□ 0.51
SMARCB1-204ENST00000407422 CPAMD8Q8IZJ3 1885 aa18.25■□□□□ 0.51
SMARCB1-204ENST00000407422 LOC102723996A0A087X1L8 192 aa18.24■□□□□ 0.51
SMARCB1-204ENST00000407422 CDC7O00311 574 aa18.24■□□□□ 0.51
SMARCB1-204ENST00000407422 ENO2P09104 434 aaPredicted RBP18.24■□□□□ 0.51
SMARCB1-204ENST00000407422 GRK3P35626 688 aa18.24■□□□□ 0.51
SMARCB1-204ENST00000407422 CCR8P51685 355 aa18.24■□□□□ 0.51
SMARCB1-204ENST00000407422 ZGRF1Q86YA3 2104 aa18.24■□□□□ 0.51
SMARCB1-204ENST00000407422 CEP97Q8IW35 865 aa18.24■□□□□ 0.51
SMARCB1-204ENST00000407422 SIRT6Q8N6T7 355 aa18.24■□□□□ 0.51
SMARCB1-204ENST00000407422 ZNF740Q8NDX6 193 aa18.24■□□□□ 0.51
SMARCB1-204ENST00000407422 OR4K1Q8NGD4 311 aa18.24■□□□□ 0.51
SMARCB1-204ENST00000407422 NEIL2Q969S2 332 aa18.24■□□□□ 0.51
SMARCB1-204ENST00000407422 LMF1Q96S06 567 aa18.24■□□□□ 0.51
SMARCB1-204ENST00000407422 BARD1Q99728 777 aaKnown RBP18.24■□□□□ 0.51
SMARCB1-204ENST00000407422 ZNF700Q9H0M5 742 aa18.24■□□□□ 0.51
SMARCB1-204ENST00000407422 DPH5Q9H2P9 285 aa18.24■□□□□ 0.51
SMARCB1-204ENST00000407422 SPNS1Q9H2V7 528 aa18.24■□□□□ 0.51
SMARCB1-204ENST00000407422 NPEPPSL1A6NEC2 478 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 OR1F1O43749 312 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 RDH16O75452 317 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 SERPINA7P05543 415 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 C8orf89P0DMQ9 161 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 XCR1P46094 333 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 CBLBQ13191 982 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 ZNF169Q14929 603 aaPredicted RBP18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 MINDY4Q4G0A6 757 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 MFSD4BQ5TF39 518 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 LANCL3Q6ZV70 420 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 SPATA4Q8NEY3 305 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 ANKRD49Q8WVL7 239 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 ATL1Q8WXF7 558 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 TSNARE1Q96NA8 513 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 MCMBPQ9BTE3 642 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 ANKHQ9HCJ1 492 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 RIC8BQ9NVN3 520 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 PLA2G3Q9NZ20 509 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 NAALAD2Q9Y3Q0 740 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 IGHV3-20A0A0C4DH32 117 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 ZNF860A6NHJ4 632 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 RAD51CO43502 376 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 SLC35G6P0C7Q6 338 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 SSTR1P30872 391 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 SOX11P35716 441 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 C2orf54Q08AI8 447 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 SLC5A11Q8WWX8 675 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 IMMP1LQ96LU5 166 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 CYTH2Q99418 400 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 ERP44Q9BS26 406 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 SARGQ9BW04 601 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 LRRC4CQ9HCJ2 640 aa18.23■□□□□ 0.51
SMARCB1-204ENST00000407422 CTAGE15A4D2H0 777 aa18.22■□□□□ 0.51
SMARCB1-204ENST00000407422 PCDH17O14917 1159 aa18.22■□□□□ 0.51
SMARCB1-204ENST00000407422 NDUFS4O43181 175 aa18.22■□□□□ 0.51
SMARCB1-204ENST00000407422 ITGAMP11215 1152 aa18.22■□□□□ 0.51
SMARCB1-204ENST00000407422 GP1BBP13224 206 aa18.22■□□□□ 0.51
SMARCB1-204ENST00000407422 CDC16Q13042 620 aa18.22■□□□□ 0.51
SMARCB1-204ENST00000407422 TLR1Q15399 786 aa18.22■□□□□ 0.51
SMARCB1-204ENST00000407422 B3GNTL1Q67FW5 361 aaPredicted RBP18.22■□□□□ 0.51
SMARCB1-204ENST00000407422 CTAGE6Q86UF2 777 aa18.22■□□□□ 0.51
SMARCB1-204ENST00000407422 NKAPQ8N5F7 415 aaKnown RBP18.22■□□□□ 0.51
SMARCB1-204ENST00000407422 OR5T3Q8NGG3 340 aa18.22■□□□□ 0.51
SMARCB1-204ENST00000407422 PYROXD1Q8WU10 500 aa18.22■□□□□ 0.51
SMARCB1-204ENST00000407422 METTL21AQ8WXB1 218 aa18.22■□□□□ 0.51
SMARCB1-204ENST00000407422 VPS39Q96JC1 886 aa18.22■□□□□ 0.51
SMARCB1-204ENST00000407422 RBCK1Q9BYM8 510 aa18.22■□□□□ 0.51
SMARCB1-204ENST00000407422 FAM129AQ9BZQ8 928 aa18.22■□□□□ 0.51
SMARCB1-204ENST00000407422 RHOJQ9H4E5 214 aa18.22■□□□□ 0.51
SMARCB1-204ENST00000407422 SAYSD1Q9NPB0 183 aa18.22■□□□□ 0.51
SMARCB1-204ENST00000407422 SLC22A7Q9Y694 548 aa18.22■□□□□ 0.51
SMARCB1-204ENST00000407422 DOPEY1Q5JWR5 2465 aa18.22■□□□□ 0.51
SMARCB1-204ENST00000407422 TRBC2A0A5B9 178 aa18.21■□□□□ 0.51
SMARCB1-204ENST00000407422 ANKUB1A6NFN9 424 aa18.21■□□□□ 0.51
SMARCB1-204ENST00000407422 CXorf49A8MYA2 514 aaPredicted RBP18.21■□□□□ 0.51
SMARCB1-204ENST00000407422 DNAJB6O75190 326 aa18.21■□□□□ 0.51
SMARCB1-204ENST00000407422 SEC24DO94855 1032 aaPredicted RBP18.21■□□□□ 0.51
SMARCB1-204ENST00000407422 B3GALT4O96024 378 aa18.21■□□□□ 0.51
SMARCB1-204ENST00000407422 F10P00742 488 aa18.21■□□□□ 0.51
SMARCB1-204ENST00000407422 SERPIND1P05546 499 aa18.21■□□□□ 0.51
SMARCB1-204ENST00000407422 TSFMP43897 325 aaKnown RBP18.21■□□□□ 0.51
SMARCB1-204ENST00000407422 CSHL1Q14406 222 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms