RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 CSTF3Q12996 717 aaKnown RBP12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 BOP1Q14137 746 aaKnown RBP12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 ATP6AP1Q15904 470 aa12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 PHKG1Q16816 387 aa12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 RNF220Q5VTB9 566 aa12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 ATG9BQ674R7 924 aa12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 DBX2Q6ZNG2 339 aa12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 DPPA4Q7L190 304 aa12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 IFNEQ86WN2 208 aa12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 TMPRSS12Q86WS5 348 aa12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 SPNS2Q8IVW8 549 aa12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 ALDH16A1Q8IZ83 802 aa12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 ADGRG5Q8IZF4 528 aa12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 TMEM132CQ8N3T6 1108 aa12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 HM13Q8TCT9 377 aa12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 ZFAND2BQ8WV99 257 aa12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 ELMO1Q92556 727 aa12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 SDCCAG3Q96C92 435 aa12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 DGCR14Q96DF8 476 aaKnown RBP12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 ITCHQ96J02 903 aa12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 CCDC138Q96M89 665 aa12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 SEMA6AQ9H2E6 1030 aa12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 GORASP2Q9H8Y8 452 aa12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 PCDH12Q9NPG4 1184 aa12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 TUBA8Q9NY65 449 aaPredicted RBP12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 FTSJ1Q9UET6 329 aa12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 EGFL7Q9UHF1 273 aa12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 MYRFQ9Y2G1 1151 aa12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 CCL27Q9Y4X3 112 aa12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 FADS3Q9Y5Q0 445 aa12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 COMMD3-BMI1R4GMX3 469 aa12.46□□□□□ -0.41
SMARCB1-203ENST00000407082 A0A0U1RQS6 177 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 A8MX80 341 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 AREL1O15033 823 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 ANKRD28O15084 1053 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 GPR39O43194 453 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 TSPAN6O43657 245 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 LHCGRP22888 699 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 IL12AP29459 219 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 S100A3P33764 101 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 HNF4AP41235 474 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 SLC6A12P48065 614 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 AFF3P51826 1226 aaKnown RBP12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 TUBA4AP68366 448 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 SRSF11Q05519 484 aaKnown RBP12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 ELP6Q0PNE2 266 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 LRRC74AQ0VAA2 488 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 DYNC1I2Q13409 638 aaKnown RBP12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 TEAD4Q15561 434 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 SYTL3Q4VX76 610 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 RFTN2Q52LD8 501 aaPredicted RBP12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 C6orf52Q5T4I8 152 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 SLC30A9Q6PML9 568 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 SLC2A7Q6PXP3 512 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 DLEU7Q6UYE1 221 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 SPRED1Q7Z699 444 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 AMIGO2Q86SJ2 522 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 KLHDC8AQ8IYD2 350 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 LIX1Q8N485 282 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 BTN2A2Q8WVV5 523 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 GLMNQ92990 594 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 TMEM159Q96B96 161 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 REPS1Q96D71 796 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 TEX37Q96LM6 180 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 RDH12Q96NR8 316 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 CIB1Q99828 191 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 CCM2Q9BSQ5 444 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 ANKRD60Q9BZ19 345 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 CLMPQ9H6B4 373 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 C6orf106Q9H6K1 298 aaPredicted RBP12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 PREBQ9HCU5 417 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 TSR3Q9UJK0 312 aaKnown RBP12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 ITM2BQ9Y287 266 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 RNF11Q9Y3C5 154 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 ASB1Q9Y576 335 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 PTPRQQ9UMZ3 2332 aa12.45□□□□□ -0.42
SMARCB1-203ENST00000407082 TEX51A0A1B0GUA7 166 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 TCRBV5S2A0A599 114 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 ASPDHA6ND91 283 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 SPINT1O43278 529 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 RNGTTO60942 597 aaKnown RBP12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 SLCO2B1O94956 709 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 RASAL1O95294 804 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 H6PDO95479 791 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 PGRP06401 933 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 RAP2AP10114 183 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 IL1RNP18510 177 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 GGT1P19440 569 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 CCT8P50990 548 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 B4GALNT1Q00973 533 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 KCNC4Q03721 635 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 PCDH1Q08174 1060 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 TARDBPQ13148 414 aaKnown RBP eCLIP12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 NRF1Q16656 503 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 C18orf21Q32NC0 220 aaPredicted RBP12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 HMBOX1Q6NT76 420 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 NEK5Q6P3R8 708 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 BORAQ6PGQ7 559 aa12.44□□□□□ -0.42
SMARCB1-203ENST00000407082 ZNF765Q7L2R6 523 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms