RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 APIPQ96GX9 242 aa20.16■□□□□ 0.82
TPM1-208ENST00000404484 NRTNQ99748 197 aa20.16■□□□□ 0.82
TPM1-208ENST00000404484 THTPAQ9BU02 230 aa20.16■□□□□ 0.82
TPM1-208ENST00000404484 TMEM184CQ9NVA4 438 aa20.16■□□□□ 0.82
TPM1-208ENST00000404484 CUEDC1Q9NWM3 386 aaPredicted RBP20.16■□□□□ 0.82
TPM1-208ENST00000404484 DOLKQ9UPQ8 538 aa20.16■□□□□ 0.82
TPM1-208ENST00000404484 A0A1W2PP18 115 aa20.15■□□□□ 0.82
TPM1-208ENST00000404484 ANKDD1BA6NHY2 528 aa20.15■□□□□ 0.82
TPM1-208ENST00000404484 ISM1B1AKI9 464 aa20.15■□□□□ 0.82
TPM1-208ENST00000404484 H7BY64 318 aa20.15■□□□□ 0.82
TPM1-208ENST00000404484 ANKRD28O15084 1053 aa20.15■□□□□ 0.82
TPM1-208ENST00000404484 CELA2BP08218 269 aaPredicted RBP20.15■□□□□ 0.82
TPM1-208ENST00000404484 CD1EP15812 388 aa20.15■□□□□ 0.82
TPM1-208ENST00000404484 PTX3P26022 381 aaPredicted RBP20.15■□□□□ 0.82
TPM1-208ENST00000404484 CTSKP43235 329 aa20.15■□□□□ 0.82
TPM1-208ENST00000404484 C1orf61Q13536 156 aa20.15■□□□□ 0.82
TPM1-208ENST00000404484 GPR18Q14330 331 aa20.15■□□□□ 0.82
TPM1-208ENST00000404484 NOXRED1Q6NXP6 359 aa20.15■□□□□ 0.82
TPM1-208ENST00000404484 ADCK2Q7Z695 626 aa20.15■□□□□ 0.82
TPM1-208ENST00000404484 DEFB107AQ8IZN7 70 aa20.15■□□□□ 0.82
TPM1-208ENST00000404484 OR2L3Q8NG85 312 aa20.15■□□□□ 0.82
TPM1-208ENST00000404484 APOLD1Q96LR9 279 aa20.15■□□□□ 0.82
TPM1-208ENST00000404484 PRAP1Q96NZ9 151 aa20.15■□□□□ 0.82
TPM1-208ENST00000404484 NPAS2Q99743 824 aa20.15■□□□□ 0.82
TPM1-208ENST00000404484 MAPRE3Q9UPY8 281 aa20.15■□□□□ 0.82
TPM1-208ENST00000404484 TRBC2A0A5B9 178 aa20.14■□□□□ 0.81
TPM1-208ENST00000404484 CCDC154A6NI56 674 aa20.14■□□□□ 0.81
TPM1-208ENST00000404484 FKBP9O95302 570 aa20.14■□□□□ 0.81
TPM1-208ENST00000404484 CSNK1G2P78368 415 aa20.14■□□□□ 0.81
TPM1-208ENST00000404484 MEF2AQ02078 507 aaPredicted RBP20.14■□□□□ 0.81
TPM1-208ENST00000404484 SCUBE1Q8IWY4 988 aa20.14■□□□□ 0.81
TPM1-208ENST00000404484 ADGRF3Q8IZF5 1079 aa20.14■□□□□ 0.81
TPM1-208ENST00000404484 NAGSQ8N159 534 aa20.14■□□□□ 0.81
TPM1-208ENST00000404484 LMX1AQ8TE12 382 aa20.14■□□□□ 0.81
TPM1-208ENST00000404484 SPNS1Q9H2V7 528 aa20.14■□□□□ 0.81
TPM1-208ENST00000404484 WDR41Q9HAD4 459 aa20.14■□□□□ 0.81
TPM1-208ENST00000404484 GID8Q9NWU2 228 aa20.14■□□□□ 0.81
TPM1-208ENST00000404484 SIRT5Q9NXA8 310 aa20.14■□□□□ 0.81
TPM1-208ENST00000404484 LEF1Q9UJU2 399 aaPredicted RBP20.14■□□□□ 0.81
TPM1-208ENST00000404484 SNX7Q9UNH6 387 aa20.14■□□□□ 0.81
TPM1-208ENST00000404484 ENTPD2Q9Y5L3 495 aa20.14■□□□□ 0.81
TPM1-208ENST00000404484 ARHGEF17Q96PE2 2063 aaPredicted RBP20.14■□□□□ 0.81
TPM1-208ENST00000404484 FBP2O00757 339 aa20.13■□□□□ 0.81
TPM1-208ENST00000404484 CFLARO15519 480 aa20.13■□□□□ 0.81
TPM1-208ENST00000404484 PRMT3O60678 531 aa20.13■□□□□ 0.81
TPM1-208ENST00000404484 CIB2O75838 187 aa20.13■□□□□ 0.81
TPM1-208ENST00000404484 CER1O95813 267 aa20.13■□□□□ 0.81
TPM1-208ENST00000404484 CD59P13987 128 aa20.13■□□□□ 0.81
TPM1-208ENST00000404484 CAPN3P20807 821 aa20.13■□□□□ 0.81
TPM1-208ENST00000404484 PEBP1P30086 187 aaKnown RBP20.13■□□□□ 0.81
TPM1-208ENST00000404484 RAP1GDS1P52306 607 aa20.13■□□□□ 0.81
TPM1-208ENST00000404484 CLDN8P56748 225 aa20.13■□□□□ 0.81
TPM1-208ENST00000404484 ELF3P78545 371 aaPredicted RBP20.13■□□□□ 0.81
TPM1-208ENST00000404484 TBL3Q12788 808 aaKnown RBP20.13■□□□□ 0.81
TPM1-208ENST00000404484 VPS26BQ4G0F5 336 aa20.13■□□□□ 0.81
TPM1-208ENST00000404484 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.13■□□□□ 0.81
TPM1-208ENST00000404484 RNF175Q8N4F7 328 aa20.13■□□□□ 0.81
TPM1-208ENST00000404484 ZNF740Q8NDX6 193 aa20.13■□□□□ 0.81
TPM1-208ENST00000404484 CHTF18Q8WVB6 975 aa20.13■□□□□ 0.81
TPM1-208ENST00000404484 STARD8Q92502 1023 aa20.13■□□□□ 0.81
TPM1-208ENST00000404484 TEX37Q96LM6 180 aa20.13■□□□□ 0.81
TPM1-208ENST00000404484 TWSG1Q9GZX9 223 aa20.13■□□□□ 0.81
TPM1-208ENST00000404484 ACTL8Q9H568 366 aa20.13■□□□□ 0.81
TPM1-208ENST00000404484 ERVMER34-1Q9H9K5 563 aa20.13■□□□□ 0.81
TPM1-208ENST00000404484 AHSPQ9NZD4 102 aa20.13■□□□□ 0.81
TPM1-208ENST00000404484 DLGAP4Q9Y2H0 992 aa20.13■□□□□ 0.81
TPM1-208ENST00000404484 B4DGG1 531 aa20.12■□□□□ 0.81
TPM1-208ENST00000404484 EEDO75530 441 aaKnown RBP20.12■□□□□ 0.81
TPM1-208ENST00000404484 SEMA3DO95025 777 aa20.12■□□□□ 0.81
TPM1-208ENST00000404484 ASMTP46597 345 aa20.12■□□□□ 0.81
TPM1-208ENST00000404484 HHEXQ03014 270 aa20.12■□□□□ 0.81
TPM1-208ENST00000404484 PTGR1Q14914 329 aa20.12■□□□□ 0.81
TPM1-208ENST00000404484 ZNF423Q2M1K9 1284 aa20.12■□□□□ 0.81
TPM1-208ENST00000404484 C6orf163Q5TEZ5 329 aa20.12■□□□□ 0.81
TPM1-208ENST00000404484 BNC2Q6ZN30 1099 aaPredicted RBP20.12■□□□□ 0.81
TPM1-208ENST00000404484 ULK2Q8IYT8 1036 aa20.12■□□□□ 0.81
TPM1-208ENST00000404484 PATE1Q8WXA2 126 aa20.12■□□□□ 0.81
TPM1-208ENST00000404484 CENPKQ9BS16 269 aa20.12■□□□□ 0.81
TPM1-208ENST00000404484 SPHK1Q9NYA1 384 aa20.12■□□□□ 0.81
TPM1-208ENST00000404484 LMO7DNF2Z398 122 aa20.12■□□□□ 0.81
TPM1-208ENST00000404484 AQP9O43315 295 aa20.12■□□□□ 0.81
TPM1-208ENST00000404484 OR1F1O43749 312 aa20.12■□□□□ 0.81
TPM1-208ENST00000404484 RASSF9O75901 435 aa20.12■□□□□ 0.81
TPM1-208ENST00000404484 IL6P05231 212 aa20.12■□□□□ 0.81
TPM1-208ENST00000404484 SDC1P18827 310 aa20.12■□□□□ 0.81
TPM1-208ENST00000404484 SLC14A1Q13336 389 aa20.12■□□□□ 0.81
TPM1-208ENST00000404484 ADNP2Q6IQ32 1131 aa20.12■□□□□ 0.81
TPM1-208ENST00000404484 PRMT9Q6P2P2 845 aa20.12■□□□□ 0.81
TPM1-208ENST00000404484 GALNT18Q6P9A2 607 aa20.12■□□□□ 0.81
TPM1-208ENST00000404484 TMEM26Q6ZUK4 368 aa20.12■□□□□ 0.81
TPM1-208ENST00000404484 C1orf52Q8N6N3 182 aaKnown RBP20.12■□□□□ 0.81
TPM1-208ENST00000404484 FAM13CQ8NE31 585 aa20.12■□□□□ 0.81
TPM1-208ENST00000404484 ZNF548Q8NEK5 533 aaPredicted RBP20.12■□□□□ 0.81
TPM1-208ENST00000404484 JPH3Q8WXH2 748 aaPredicted RBP20.12■□□□□ 0.81
TPM1-208ENST00000404484 C11orf24Q96F05 449 aaPredicted RBP20.12■□□□□ 0.81
TPM1-208ENST00000404484 DPH7Q9BTV6 452 aa20.12■□□□□ 0.81
TPM1-208ENST00000404484 SARGQ9BW04 601 aa20.12■□□□□ 0.81
TPM1-208ENST00000404484 CLMPQ9H6B4 373 aa20.12■□□□□ 0.81
TPM1-208ENST00000404484 SLC6A20Q9NP91 592 aa20.12■□□□□ 0.81
TPM1-208ENST00000404484 SLC52A3Q9NQ40 469 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms