RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 PLD3Q8IV08 490 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 TMEFF1Q8IYR6 380 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 KIAA2013Q8IYS2 634 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 NAGSQ8N159 534 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 FBXL6Q8N531 539 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 FAM46DQ8NEK8 389 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 WDR48Q8TAF3 677 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 DNASE2BQ8WZ79 361 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 JADE3Q92613 823 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 TMEM125Q96AQ2 219 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 ASB9Q96DX5 294 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 CGREF1Q99674 301 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 DPH7Q9BTV6 452 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 LRRC61Q9BV99 259 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 MS4A8Q9BY19 250 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 SLC6A20Q9NP91 592 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 SUCOQ9UBS9 1254 aaKnown RBP12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 SNX7Q9UNH6 387 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 MAPRE3Q9UPY8 281 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 L3MBTL1Q9Y468 752 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 SEMA3DO95025 777 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 NME1P15531 152 aaKnown RBP12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 HOXA6P31267 233 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 CYP4F2P78329 520 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 KIR2DS3Q14952 304 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 PLCL1Q15111 1095 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 RCN1Q15293 331 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 UGT8Q16880 541 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 RABL3Q5HYI8 236 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 KIAA1614Q5VZ46 1190 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 GPR180Q86V85 440 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 SFTPA2Q8IWL1 248 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 HIPK4Q8NE63 616 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 TTLQ8NG68 377 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 DNAJB8Q8NHS0 232 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 SLC26A7Q8TE54 656 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 SLC37A2Q8TED4 501 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 STARD8Q92502 1023 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 PPM1MQ96MI6 270 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 F2RL3Q96RI0 385 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 SARGQ9BW04 601 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 PCDHAC1Q9H158 963 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 DUSP15Q9H1R2 295 aaPredicted RBP12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 RMND5AQ9H871 391 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 MCM8Q9UJA3 840 aa12.74□□□□□ -0.37
CEACAM1-206ENST00000403136 C15orf38-AP3S2A0A0A6YYH1 394 aa12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 GABRR3A8MPY1 467 aa12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 CLEC3AO75596 197 aa12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 KLHL18O94889 574 aa12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 PDGFBP01127 241 aaPredicted RBP12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 GBAP04062 536 aa12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 KLK1P06870 262 aa12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 HSD17B1P14061 328 aa12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 KIR3DL1P43629 444 aa12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 ELOCQ15369 112 aa12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 HKDC1Q2TB90 917 aa12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 C6orf10Q5SRN2 563 aa12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 OR4F3Q6IEY1 312 aa12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 ZNF425Q6IV72 752 aa12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 MSANTD1Q6ZTZ1 278 aa12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 ARPINQ7Z6K5 226 aa12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 OR7A2PQ8NGA2 310 aa12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 OR8J2Q8NGG1 315 aa12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 CDC26Q8NHZ8 85 aa12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 CREB3L4Q8TEY5 395 aa12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 ZDHHC1Q8WTX9 485 aa12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 ITCHQ96J02 903 aa12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 TRIM8Q9BZR9 551 aa12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 KCNH6Q9H252 994 aa12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 S100A14Q9HCY8 104 aa12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 SERHLQ9NQF3 203 aa12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 GMPR2Q9P2T1 348 aaKnown RBP12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 STX18Q9P2W9 335 aaKnown RBP12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 MAN2B2Q9Y2E5 1009 aa12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 ABCA7Q8IZY2 2146 aa12.73□□□□□ -0.37
CEACAM1-206ENST00000403136 ARHGEF17Q96PE2 2063 aaPredicted RBP12.72□□□□□ -0.37
CEACAM1-206ENST00000403136 CCDC163A0A0D9SF12 145 aa12.72□□□□□ -0.37
CEACAM1-206ENST00000403136 OR6C74A6NCV1 312 aa12.72□□□□□ -0.37
CEACAM1-206ENST00000403136 PLPP1O14494 284 aa12.72□□□□□ -0.37
CEACAM1-206ENST00000403136 ERN1O75460 977 aaKnown RBP12.72□□□□□ -0.37
CEACAM1-206ENST00000403136 COX7A2P14406 83 aa12.72□□□□□ -0.37
CEACAM1-206ENST00000403136 BCL6P41182 706 aa12.72□□□□□ -0.37
CEACAM1-206ENST00000403136 GRIA3P42263 894 aa12.72□□□□□ -0.37
CEACAM1-206ENST00000403136 EEFSECP57772 596 aaKnown RBP12.72□□□□□ -0.37
CEACAM1-206ENST00000403136 NXPH1P58417 271 aa12.72□□□□□ -0.37
CEACAM1-206ENST00000403136 AP2B1P63010 937 aa12.72□□□□□ -0.37
CEACAM1-206ENST00000403136 ZNF763Q0D2J5 394 aa12.72□□□□□ -0.37
CEACAM1-206ENST00000403136 CWF19L1Q69YN2 538 aaKnown RBP12.72□□□□□ -0.37
CEACAM1-206ENST00000403136 TBC1D19Q8N5T2 526 aa12.72□□□□□ -0.37
CEACAM1-206ENST00000403136 FLVCR1-AS1Q8TAF5 88 aa12.72□□□□□ -0.37
CEACAM1-206ENST00000403136 C16orf78Q8WTQ4 265 aa12.72□□□□□ -0.37
CEACAM1-206ENST00000403136 OR2A14Q96R47 310 aa12.72□□□□□ -0.37
CEACAM1-206ENST00000403136 PRPF18Q99633 342 aaKnown RBP12.72□□□□□ -0.37
CEACAM1-206ENST00000403136 REXO4Q9GZR2 422 aaKnown RBP12.72□□□□□ -0.37
CEACAM1-206ENST00000403136 VAPAQ9P0L0 249 aa12.72□□□□□ -0.37
CEACAM1-206ENST00000403136 BTBD3Q9Y2F9 522 aa12.72□□□□□ -0.37
CEACAM1-206ENST00000403136 KLHL20Q9Y2M5 609 aa12.72□□□□□ -0.37
CEACAM1-206ENST00000403136 A0A096LPI6 279 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 FAM221BA6H8Z2 402 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms