RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 SLC9B2Q86UD5 537 aa24.56■■□□□ 1.52
CPNE1-205ENST00000401607 GPR180Q86V85 440 aa24.56■■□□□ 1.52
CPNE1-205ENST00000401607 SFTPA2Q8IWL1 248 aa24.56■■□□□ 1.52
CPNE1-205ENST00000401607 MFSD2AQ8NA29 543 aa24.56■■□□□ 1.52
CPNE1-205ENST00000401607 PUM2Q8TB72 1066 aaKnown RBP eCLIP24.56■■□□□ 1.528e-8■■■■■ 32.7
CPNE1-205ENST00000401607 PAIP1Q9H074 479 aaKnown RBP24.56■■□□□ 1.52
CPNE1-205ENST00000401607 KCNH6Q9H252 994 aa24.56■■□□□ 1.52
CPNE1-205ENST00000401607 SLC25A37Q9NYZ2 338 aa24.56■■□□□ 1.52
CPNE1-205ENST00000401607 STOML1Q9UBI4 398 aa24.56■■□□□ 1.52
CPNE1-205ENST00000401607 ANGPTL2Q9UKU9 493 aa24.56■■□□□ 1.52
CPNE1-205ENST00000401607 TRBV5-3A0A0A0MS03 114 aa24.55■■□□□ 1.52
CPNE1-205ENST00000401607 SCAMP2O15127 329 aaKnown RBP24.55■■□□□ 1.52
CPNE1-205ENST00000401607 GBAP04062 536 aa24.55■■□□□ 1.52
CPNE1-205ENST00000401607 COX7A2P14406 83 aa24.55■■□□□ 1.52
CPNE1-205ENST00000401607 KIR3DL1P43629 444 aa24.55■■□□□ 1.52
CPNE1-205ENST00000401607 CXCL12P48061 93 aa24.55■■□□□ 1.52
CPNE1-205ENST00000401607 WNT3P56703 355 aa24.55■■□□□ 1.52
CPNE1-205ENST00000401607 MTPNP58546 118 aa24.55■■□□□ 1.52
CPNE1-205ENST00000401607 MRPS22P82650 360 aaKnown RBP24.55■■□□□ 1.52
CPNE1-205ENST00000401607 ZNF763Q0D2J5 394 aa24.55■■□□□ 1.52
CPNE1-205ENST00000401607 DEPDC1Q5TB30 811 aa24.55■■□□□ 1.52
CPNE1-205ENST00000401607 KHDRBS2Q5VWX1 349 aaKnown RBP24.55■■□□□ 1.52
CPNE1-205ENST00000401607 DNAJC14Q6Y2X3 702 aaPredicted RBP24.55■■□□□ 1.52
CPNE1-205ENST00000401607 ANKRD46Q86W74 232 aa24.55■■□□□ 1.52
CPNE1-205ENST00000401607 DCP2Q8IU60 420 aaKnown RBP24.55■■□□□ 1.52
CPNE1-205ENST00000401607 NRG4Q8WWG1 115 aa24.55■■□□□ 1.52
CPNE1-205ENST00000401607 ANKRD27Q96NW4 1050 aa24.55■■□□□ 1.52
CPNE1-205ENST00000401607 REXO4Q9GZR2 422 aaKnown RBP24.55■■□□□ 1.52
CPNE1-205ENST00000401607 SRMSQ9H3Y6 488 aa24.55■■□□□ 1.52
CPNE1-205ENST00000401607 ALG2Q9H553 416 aa24.55■■□□□ 1.52
CPNE1-205ENST00000401607 SLC6A13Q9NSD5 602 aa24.55■■□□□ 1.52
CPNE1-205ENST00000401607 TMEM184CQ9NVA4 438 aa24.55■■□□□ 1.52
CPNE1-205ENST00000401607 THEGQ9P2T0 379 aa24.55■■□□□ 1.52
CPNE1-205ENST00000401607 EXO1Q9UQ84 846 aaKnown RBP24.55■■□□□ 1.52
CPNE1-205ENST00000401607 BTBD3Q9Y2F9 522 aa24.55■■□□□ 1.52
CPNE1-205ENST00000401607 TRBC2A0A5B9 178 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 ISM1B1AKI9 464 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 MAP3K13O43283 966 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 SEMA3DO95025 777 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 HOXB9P17482 250 aaPredicted RBP24.54■■□□□ 1.52
CPNE1-205ENST00000401607 CD38P28907 300 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 UBE2IP63279 158 aaKnown RBP24.54■■□□□ 1.52
CPNE1-205ENST00000401607 SRSF11Q05519 484 aaKnown RBP24.54■■□□□ 1.52
CPNE1-205ENST00000401607 BNIP2Q12982 314 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 C1orf61Q13536 156 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 GTDC1Q4AE62 458 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 LRIF1Q5T3J3 769 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 KIAA1614Q5VZ46 1190 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 TAF8Q7Z7C8 310 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 OR8J3Q8NGG0 315 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 OR8J2Q8NGG1 315 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 INPP5KQ9BT40 448 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 DPH7Q9BTV6 452 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 LRRC61Q9BV99 259 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 SORBS1Q9BX66 1292 aaKnown RBP24.54■■□□□ 1.52
CPNE1-205ENST00000401607 ZNF717Q9BY31 904 aaPredicted RBP24.54■■□□□ 1.52
CPNE1-205ENST00000401607 RMND5AQ9H871 391 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 PLPP1O14494 284 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 AXIN1O15169 862 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 SCN2BO60939 215 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 CCNDBP1O95273 360 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 CTSEP14091 401 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 PTPN6P29350 595 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 CMPK1P30085 196 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 GCKP35557 465 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 BLKP51451 505 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 GPR18Q14330 331 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 ANKRD26P1Q6NSI1 321 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 SPATA24Q86W54 205 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 TRIM48Q8IWZ4 208 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 NAGSQ8N159 534 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 FLVCR1-AS1Q8TAF5 88 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 STARD8Q92502 1023 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 ITCHQ96J02 903 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 F2RL3Q96RI0 385 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 POT1Q9NUX5 634 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 APOBEC3BQ9UH17 382 aaKnown RBP24.54■■□□□ 1.52
CPNE1-205ENST00000401607 MCM8Q9UJA3 840 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 HEATR5BQ9P2D3 2071 aa24.54■■□□□ 1.52
CPNE1-205ENST00000401607 A0A096LPI6 279 aa24.53■■□□□ 1.52
CPNE1-205ENST00000401607 ERN1O75460 977 aaKnown RBP24.53■■□□□ 1.52
CPNE1-205ENST00000401607 BAG2O95816 211 aa24.53■■□□□ 1.52
CPNE1-205ENST00000401607 KLK1P06870 262 aa24.53■■□□□ 1.52
CPNE1-205ENST00000401607 PIM1P11309 404 aaPredicted RBP24.53■■□□□ 1.52
CPNE1-205ENST00000401607 JUNDP17535 347 aa24.53■■□□□ 1.52
CPNE1-205ENST00000401607 ATP6V1B2P21281 511 aa24.53■■□□□ 1.52
CPNE1-205ENST00000401607 BCKDHBP21953 392 aa24.53■■□□□ 1.52
CPNE1-205ENST00000401607 BCL6P41182 706 aa24.53■■□□□ 1.52
CPNE1-205ENST00000401607 ZNF425Q6IV72 752 aa24.53■■□□□ 1.52
CPNE1-205ENST00000401607 CAMKMTQ7Z624 323 aa24.53■■□□□ 1.52
CPNE1-205ENST00000401607 DNAJB8Q8NHS0 232 aa24.53■■□□□ 1.52
CPNE1-205ENST00000401607 CREB3L4Q8TEY5 395 aa24.53■■□□□ 1.52
CPNE1-205ENST00000401607 HSPA12BQ96MM6 686 aa24.53■■□□□ 1.52
CPNE1-205ENST00000401607 CPNE7Q9UBL6 633 aa24.53■■□□□ 1.52
CPNE1-205ENST00000401607 MAPRE3Q9UPY8 281 aa24.53■■□□□ 1.52
CPNE1-205ENST00000401607 GABRR3A8MPY1 467 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 HAT1O14929 419 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 ANP32DO95626 131 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 VIPP01282 170 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 C8BP07358 591 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms