RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 USP7Q93009 1102 aa15.22■□□□□ 0.03
HMGA1-204ENST00000401473 TRMOQ9BU70 441 aa15.22■□□□□ 0.03
HMGA1-204ENST00000401473 ENAMQ9NRM1 1142 aa15.22■□□□□ 0.03
HMGA1-204ENST00000401473 FARSBQ9NSD9 589 aaKnown RBP15.22■□□□□ 0.03
HMGA1-204ENST00000401473 INTS9Q9NV88 658 aaKnown RBP15.22■□□□□ 0.03
HMGA1-204ENST00000401473 RARRES3Q9UL19 164 aa15.22■□□□□ 0.03
HMGA1-204ENST00000401473 TIMM22Q9Y584 194 aa15.22■□□□□ 0.03
HMGA1-204ENST00000401473 FFAR3O14843 346 aa15.21■□□□□ 0.03
HMGA1-204ENST00000401473 GPR42O15529 346 aa15.21■□□□□ 0.03
HMGA1-204ENST00000401473 OR2B3O76000 313 aa15.21■□□□□ 0.03
HMGA1-204ENST00000401473 TNFSF15O95150 251 aa15.21■□□□□ 0.03
HMGA1-204ENST00000401473 CAPN1P07384 714 aa15.21■□□□□ 0.03
HMGA1-204ENST00000401473 NEFHP12036 1026 aa15.21■□□□□ 0.03
HMGA1-204ENST00000401473 ZNF28P17035 718 aa15.21■□□□□ 0.03
HMGA1-204ENST00000401473 AHRP35869 848 aa15.21■□□□□ 0.03
HMGA1-204ENST00000401473 CYP4F2P78329 520 aa15.21■□□□□ 0.03
HMGA1-204ENST00000401473 GABREP78334 506 aa15.21■□□□□ 0.03
HMGA1-204ENST00000401473 GALNT1Q10472 559 aaPredicted RBP15.21■□□□□ 0.03
HMGA1-204ENST00000401473 BST1Q10588 318 aa15.21■□□□□ 0.03
HMGA1-204ENST00000401473 HYAL2Q12891 473 aa15.21■□□□□ 0.03
HMGA1-204ENST00000401473 GPS2Q13227 327 aa15.21■□□□□ 0.03
HMGA1-204ENST00000401473 LAPTM5Q13571 262 aa15.21■□□□□ 0.03
HMGA1-204ENST00000401473 GGTA1PQ4G0N0 100 aa15.21■□□□□ 0.03
HMGA1-204ENST00000401473 ARHGEF39Q8N4T4 335 aa15.21■□□□□ 0.03
HMGA1-204ENST00000401473 KCT2Q8NC54 265 aa15.21■□□□□ 0.03
HMGA1-204ENST00000401473 PPP1R14CQ8TAE6 165 aa15.21■□□□□ 0.03
HMGA1-204ENST00000401473 MTFMTQ96DP5 389 aaKnown RBP15.21■□□□□ 0.03
HMGA1-204ENST00000401473 TAAR9Q96RI9 348 aa15.21■□□□□ 0.03
HMGA1-204ENST00000401473 NRSN2Q9GZP1 204 aa15.21■□□□□ 0.03
HMGA1-204ENST00000401473 PITHD1Q9GZP4 211 aaPredicted RBP15.21■□□□□ 0.03
HMGA1-204ENST00000401473 AICDAQ9GZX7 198 aa15.21■□□□□ 0.03
HMGA1-204ENST00000401473 RHBGQ9H310 441 aa15.21■□□□□ 0.03
HMGA1-204ENST00000401473 ANGPTL2Q9UKU9 493 aa15.21■□□□□ 0.03
HMGA1-204ENST00000401473 CCDC88CQ9P219 2028 aa15.21■□□□□ 0.03
HMGA1-204ENST00000401473 MED26O95402 600 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 SERPINB3P29508 390 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 PKNOX1P55347 436 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 ITGA1P56199 1179 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 RTP5Q14D33 572 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 HIST2H2ACQ16777 129 aaPredicted RBP15.2■□□□□ 0.02
HMGA1-204ENST00000401473 PRTGQ2VWP7 1150 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 HIST2H2AA3Q6FI13 130 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 CUZD1Q86UP6 607 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 DTWD1Q8N5C7 304 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 ZNF655Q8N720 491 aaPredicted RBP15.2■□□□□ 0.02
HMGA1-204ENST00000401473 HUS1BQ8NHY5 278 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 METTL6Q8TCB7 284 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 SREK1Q8WXA9 508 aaKnown RBP15.2■□□□□ 0.02
HMGA1-204ENST00000401473 ZNF75CPQ92670 426 aaPredicted RBP15.2■□□□□ 0.02
HMGA1-204ENST00000401473 RERGQ96A58 199 aaPredicted RBP15.2■□□□□ 0.02
HMGA1-204ENST00000401473 THAP11Q96EK4 314 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 SORT1Q99523 831 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 MTERF1Q99551 399 aaKnown RBP15.2■□□□□ 0.02
HMGA1-204ENST00000401473 MANSC1Q9H8J5 431 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 ZDHHC2Q9UIJ5 367 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 RUVBL1Q9Y265 456 aaKnown RBP15.2■□□□□ 0.02
HMGA1-204ENST00000401473 PCDHGA11Q9Y5H2 935 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 SCN2AQ99250 2005 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 FITM1A5D6W6 292 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 ANKDD1BA6NHY2 528 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 ZNF749O43361 778 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 NTRK1P04629 796 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 GRK2P25098 689 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 GCGRP47871 477 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 SLC1A6P48664 564 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 ABCE1P61221 599 aaKnown RBP15.2■□□□□ 0.02
HMGA1-204ENST00000401473 STX3Q13277 289 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 DCAF12Q5T6F0 453 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 CLEC6AQ6EIG7 209 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 ASPGQ86U10 573 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 BPHLQ86WA6 291 aaPredicted RBP15.2■□□□□ 0.02
HMGA1-204ENST00000401473 CSNK1A1LQ8N752 337 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 ZNF473Q8WTR7 871 aaKnown RBP15.2■□□□□ 0.02
HMGA1-204ENST00000401473 HBEGFQ99075 208 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 TMEM121BQ9BXQ6 578 aaPredicted RBP15.2■□□□□ 0.02
HMGA1-204ENST00000401473 SPRY4Q9C004 299 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 KLHL31Q9H511 634 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 FOXJ2Q9P0K8 574 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 TRPS1Q9UHF7 1281 aa15.2■□□□□ 0.02
HMGA1-204ENST00000401473 MAGEB17A8MXT2 336 aa15.19■□□□□ 0.02
HMGA1-204ENST00000401473 TMEM233B4DJY2 109 aa15.19■□□□□ 0.02
HMGA1-204ENST00000401473 ZSCAN9O15535 394 aaPredicted RBP15.19■□□□□ 0.02
HMGA1-204ENST00000401473 NDUFS4O43181 175 aa15.19■□□□□ 0.02
HMGA1-204ENST00000401473 SNNO75324 88 aaPredicted RBP15.19■□□□□ 0.02
HMGA1-204ENST00000401473 SERPIND1P05546 499 aa15.19■□□□□ 0.02
HMGA1-204ENST00000401473 FGF4P08620 206 aa15.19■□□□□ 0.02
HMGA1-204ENST00000401473 PCNAP12004 261 aa15.19■□□□□ 0.02
HMGA1-204ENST00000401473 SERPINB5P36952 375 aa15.19■□□□□ 0.02
HMGA1-204ENST00000401473 RAB15P59190 212 aa15.19■□□□□ 0.02
HMGA1-204ENST00000401473 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.19■□□□□ 0.02
HMGA1-204ENST00000401473 TCTE1Q5JU00 501 aa15.19■□□□□ 0.02
HMGA1-204ENST00000401473 FRG2Q64ET8 278 aa15.19■□□□□ 0.02
HMGA1-204ENST00000401473 CEACAM20Q6UY09 585 aa15.19■□□□□ 0.02
HMGA1-204ENST00000401473 GPR135Q8IZ08 494 aa15.19■□□□□ 0.02
HMGA1-204ENST00000401473 TRPV3Q8NET8 790 aa15.19■□□□□ 0.02
HMGA1-204ENST00000401473 OR8K5Q8NH50 307 aa15.19■□□□□ 0.02
HMGA1-204ENST00000401473 AGR3Q8TD06 166 aa15.19■□□□□ 0.02
HMGA1-204ENST00000401473 GATA6Q92908 595 aa15.19■□□□□ 0.02
HMGA1-204ENST00000401473 FRG2BQ96QU4 278 aa15.19■□□□□ 0.02
HMGA1-204ENST00000401473 FANCEQ9HB96 536 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms