RNA–Protein interactions for RNA: ENST00000399240.5

RUNX1-205, Transcript of runt related transcription factor 1, humanhuman

TSL 3 BASIC

Gene RUNX1, Length 1,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-205ENST00000399240 ANKDD1BA6NHY2 528 aa23.32■■□□□ 1.32
RUNX1-205ENST00000399240 MAGEB17A8MXT2 336 aa23.32■■□□□ 1.32
RUNX1-205ENST00000399240 EDF1O60869 148 aaKnown RBP23.32■■□□□ 1.32
RUNX1-205ENST00000399240 ULK1O75385 1050 aa23.32■■□□□ 1.32
RUNX1-205ENST00000399240 KRT6AP02538 564 aa23.32■■□□□ 1.32
RUNX1-205ENST00000399240 KRT6BP04259 564 aa23.32■■□□□ 1.32
RUNX1-205ENST00000399240 JUNP05412 331 aaKnown RBP23.32■■□□□ 1.32
RUNX1-205ENST00000399240 KRT6CP48668 564 aa23.32■■□□□ 1.32
RUNX1-205ENST00000399240 IFT88Q13099 833 aa23.32■■□□□ 1.32
RUNX1-205ENST00000399240 COL9A2Q14055 689 aaPredicted RBP23.32■■□□□ 1.32
RUNX1-205ENST00000399240 DGLUCYQ7Z3D6 616 aa23.32■■□□□ 1.32
RUNX1-205ENST00000399240 MARCH9Q86YJ5 346 aa23.32■■□□□ 1.32
RUNX1-205ENST00000399240 CRLF3Q8IUI8 442 aa23.32■■□□□ 1.32
RUNX1-205ENST00000399240 BMPERQ8N8U9 685 aa23.32■■□□□ 1.32
RUNX1-205ENST00000399240 PIWIL2Q8TC59 973 aaKnown RBP23.32■■□□□ 1.32
RUNX1-205ENST00000399240 TWIST2Q8WVJ9 160 aa23.32■■□□□ 1.32
RUNX1-205ENST00000399240 ZNF501Q96CX3 271 aaPredicted RBP23.32■■□□□ 1.32
RUNX1-205ENST00000399240 THAP11Q96EK4 314 aa23.32■■□□□ 1.32
RUNX1-205ENST00000399240 ZNF317Q96PQ6 595 aaPredicted RBP23.32■■□□□ 1.32
RUNX1-205ENST00000399240 STRADBQ9C0K7 418 aa23.32■■□□□ 1.32
RUNX1-205ENST00000399240 STARD5Q9NSY2 213 aa23.32■■□□□ 1.32
RUNX1-205ENST00000399240 SPTBN4Q9H254 2564 aa23.32■■□□□ 1.32
RUNX1-205ENST00000399240 FAM149AA5PLN7 773 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 EFCAB7A8K855 629 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 TMEM150CB9EJG8 249 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 H3BMH7 237 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 TMX2-CTNND1H3BSU7 103 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 NDUFS4O43181 175 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 EIF2S1P05198 315 aaKnown RBP23.31■■□□□ 1.32
RUNX1-205ENST00000399240 SERPIND1P05546 499 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 CCL4P13236 92 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 HYAL2Q12891 473 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 TUBB3Q13509 450 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 HKDC1Q2TB90 917 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 ASPGQ86U10 573 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 TTLQ8NG68 377 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 OR1L3Q8NH93 324 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 SLC13A3Q8WWT9 602 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 RERGQ96A58 199 aaPredicted RBP23.31■■□□□ 1.32
RUNX1-205ENST00000399240 LIN37Q96GY3 246 aaPredicted RBP23.31■■□□□ 1.32
RUNX1-205ENST00000399240 ZNF285Q96NJ3 590 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 OR6C1Q96RD1 312 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 CMKLR1Q99788 373 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 AICDAQ9GZX7 198 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 DMRT3Q9NQL9 472 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 A0A1W2PNU3 283 aaPredicted RBP23.31■■□□□ 1.32
RUNX1-205ENST00000399240 PMS2P1A4D2B8 440 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 SRPX2O60687 465 aaPredicted RBP23.31■■□□□ 1.32
RUNX1-205ENST00000399240 SH3BGRLO75368 114 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 SKAP2O75563 359 aaPredicted RBP23.31■■□□□ 1.32
RUNX1-205ENST00000399240 LSP1P33241 339 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 PIK3CBP42338 1070 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 RPS13P62277 151 aaKnown RBP23.31■■□□□ 1.32
RUNX1-205ENST00000399240 GNGT1P63211 74 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 FOXM1Q08050 763 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 TARDBPQ13148 414 aaKnown RBP eCLIP23.31■■□□□ 1.325e-7■■■■■ 28.6
RUNX1-205ENST00000399240 WASHC2DQ5SRD0 308 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 TMPRSS12Q86WS5 348 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 LRRC34Q8IZ02 419 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 CCT6BQ92526 530 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 SPRTNQ9H040 489 aaPredicted RBP23.31■■□□□ 1.32
RUNX1-205ENST00000399240 APMAPQ9HDC9 416 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 FGFR1OP2Q9NVK5 253 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 LOXL2Q9Y4K0 774 aa23.31■■□□□ 1.32
RUNX1-205ENST00000399240 CLEC3AO75596 197 aa23.3■■□□□ 1.32
RUNX1-205ENST00000399240 ETHE1O95571 254 aa23.3■■□□□ 1.32
RUNX1-205ENST00000399240 VIMP08670 466 aaKnown RBP23.3■■□□□ 1.32
RUNX1-205ENST00000399240 GSTM2P28161 218 aa23.3■■□□□ 1.32
RUNX1-205ENST00000399240 SNRPNP63162 240 aaKnown RBP23.3■■□□□ 1.32
RUNX1-205ENST00000399240 ACY1Q03154 408 aa23.3■■□□□ 1.32
RUNX1-205ENST00000399240 PDCD2Q16342 344 aaPredicted RBP23.3■■□□□ 1.32
RUNX1-205ENST00000399240 RAB11FIP2Q7L804 512 aa23.3■■□□□ 1.32
RUNX1-205ENST00000399240 CSNK1A1LQ8N752 337 aa23.3■■□□□ 1.32
RUNX1-205ENST00000399240 KCT2Q8NC54 265 aa23.3■■□□□ 1.32
RUNX1-205ENST00000399240 TRPV3Q8NET8 790 aa23.3■■□□□ 1.32
RUNX1-205ENST00000399240 N4BP2L2Q92802 583 aaPredicted RBP23.3■■□□□ 1.32
RUNX1-205ENST00000399240 SEC16BQ96JE7 1060 aa23.3■■□□□ 1.32
RUNX1-205ENST00000399240 MS4A8Q9BY19 250 aa23.3■■□□□ 1.32
RUNX1-205ENST00000399240 FOXE1O00358 373 aaPredicted RBP23.29■■□□□ 1.32
RUNX1-205ENST00000399240 PIP5K1BO14986 540 aa23.29■■□□□ 1.32
RUNX1-205ENST00000399240 TGFB1P01137 390 aa23.29■■□□□ 1.32
RUNX1-205ENST00000399240 ITIH1P19827 911 aa23.29■■□□□ 1.32
RUNX1-205ENST00000399240 CACTIN-AS1Q8N1I8 211 aa23.29■■□□□ 1.32
RUNX1-205ENST00000399240 CHCHD4Q8N4Q1 142 aa23.29■■□□□ 1.32
RUNX1-205ENST00000399240 ADGRE2Q9UHX3 823 aa23.29■■□□□ 1.32
RUNX1-205ENST00000399240 ADAM21Q9UKJ8 722 aa23.29■■□□□ 1.32
RUNX1-205ENST00000399240 RUVBL1Q9Y265 456 aaKnown RBP23.29■■□□□ 1.32
RUNX1-205ENST00000399240 SCN3AQ9NY46 2000 aa23.29■■□□□ 1.32
RUNX1-205ENST00000399240 CHEK2O96017 543 aa23.28■■□□□ 1.32
RUNX1-205ENST00000399240 SERPINA6P08185 405 aa23.28■■□□□ 1.32
RUNX1-205ENST00000399240 LINC00032P0C843 101 aa23.28■■□□□ 1.32
RUNX1-205ENST00000399240 SERPINB1P30740 379 aa23.28■■□□□ 1.32
RUNX1-205ENST00000399240 HNRNPH1P31943 449 aaKnown RBP23.28■■□□□ 1.32
RUNX1-205ENST00000399240 SEC24CP53992 1094 aa23.28■■□□□ 1.32
RUNX1-205ENST00000399240 BTKQ06187 659 aa23.28■■□□□ 1.32
RUNX1-205ENST00000399240 PWP1Q13610 501 aa23.28■■□□□ 1.32
RUNX1-205ENST00000399240 C10orf62Q5T681 223 aaPredicted RBP23.28■■□□□ 1.32
RUNX1-205ENST00000399240 MAVSQ7Z434 540 aa23.28■■□□□ 1.32
RUNX1-205ENST00000399240 WDR75Q8IWA0 830 aaKnown RBP23.28■■□□□ 1.32
RUNX1-205ENST00000399240 NT5CQ8TCD5 201 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms