RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 DYNC1I1O14576 645 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 MAP3K7O43318 606 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ZNF749O43361 778 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 UGDHO60701 494 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 SCRG1O75711 98 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 STK17BO94768 372 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 OR4F21O95013 312 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 NTRK1P04629 796 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 EIF2S1P05198 315 aaKnown RBP11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 C1QTNF9P0C862 333 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 RBMS1P29558 406 aaKnown RBP11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 AHRP35869 848 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 HNF4AP41235 474 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 CCNG1P51959 295 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 LCP2Q13094 533 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 GPS2Q13227 327 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 RBBP5Q15291 538 aaKnown RBP11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 GGTA1PQ4G0N0 100 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 LIPJQ5W064 366 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 LCN10Q6JVE6 187 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ASPGQ86U10 573 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 DTX1Q86Y01 620 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 SHISA5Q8N114 240 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 KCT2Q8NC54 265 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 OR7G3Q8NG95 312 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 WDR20Q8TBZ3 569 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 NT5CQ8TCD5 201 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 MGARPQ8TDB4 240 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 TEFMQ96QE5 360 aaKnown RBP11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 HS3ST6Q96QI5 342 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ZPBPQ9BS86 351 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ASPSCR1Q9BZE9 553 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 SLC6A16Q9GZN6 736 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 RHBGQ9H310 441 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 DHCR7Q9UBM7 475 aaKnown RBP11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 DKK4Q9UBT3 224 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 SERTAD3Q9UJW9 196 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 H0YIV9 168 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 BIRC5O15392 142 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 FOXS1O43638 330 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 CLDN9O95484 217 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 OTCP00480 354 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 CHRNGP07510 517 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 HNRNPH1P31943 449 aaKnown RBP11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 HPDP32754 393 aaPredicted RBP11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 GRK3P35626 688 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 HTR6P50406 440 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 FOXA1P55317 472 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ZRSR2Q15696 482 aaKnown RBP11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 RBBP7Q16576 425 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 CPSF6Q16630 551 aaKnown RBP eCLIP11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 TCTE1Q5JU00 501 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 TCHHL1Q5QJ38 904 aaPredicted RBP11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 RHBDD2Q6NTF9 364 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 TMEM214Q6NUQ4 689 aaKnown RBP11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 MED27Q6P2C8 311 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 TLDC1Q6P9B6 456 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 CYB5D1Q6P9G0 228 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 GPRIN3Q6ZVF9 776 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 PRSS41Q7RTY9 318 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 TMEM126BQ8IUX1 230 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 GPR135Q8IZ08 494 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 KRT78Q8N1N4 520 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 PPP4R1Q8TF05 950 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ZNF473Q8WTR7 871 aaKnown RBP11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 SLC13A3Q8WWT9 602 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 N4BP2L2Q92802 583 aaPredicted RBP11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ZNF578Q96N58 590 aaPredicted RBP11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 GBP5Q96PP8 586 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 KCNA7Q96RP8 456 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ULBP3Q9BZM4 244 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 SHCBP1LQ9BZQ2 653 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 PITHD1Q9GZP4 211 aaPredicted RBP11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 KLHL31Q9H511 634 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ZNF395Q9H8N7 513 aaPredicted RBP11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ACTR5Q9H9F9 607 aaPredicted RBP11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 THSD1Q9NS62 852 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 SLC22A11Q9NSA0 550 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 FARSBQ9NSD9 589 aaKnown RBP11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 CUTCQ9NTM9 273 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 TRPS1Q9UHF7 1281 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 APC2O95996 2303 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 IGF2RP11717 2491 aa11.82□□□□□ -0.52
HLA-DQB1-203ENST00000399082 CHD8Q9HCK8 2581 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 SEC16AO15027 2179 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 HYKKA2RU49 373 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 TERTO14746 1132 aaKnown RBP11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 FFAR3O14843 346 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 GPR42O15529 346 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 NDUFS4O43181 175 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ATP8B1O43520 1251 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ITM2AO43736 263 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 NPHS1O60500 1241 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 CPNE3O75131 537 aaKnown RBP11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 H2AFYO75367 372 aaKnown RBP11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 CLEC3AO75596 197 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ETHE1O95571 254 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 MLYCDO95822 493 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 B3GALT4O96024 378 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 SMIM10L1P0DMW3 83 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms