RNA–Protein interactions for RNA: ENST00000398465.3

VPREB3-202, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

TSL 3 BASIC

Gene VPREB3, Length 503 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-202ENST00000398465 TFEBP19484 476 aa12.13□□□□□ -0.47
VPREB3-202ENST00000398465 CXCR2P25025 360 aa12.13□□□□□ -0.47
VPREB3-202ENST00000398465 MAGEA12P43365 314 aa12.13□□□□□ -0.47
VPREB3-202ENST00000398465 SCTRP47872 440 aa12.13□□□□□ -0.47
VPREB3-202ENST00000398465 SKP1P63208 163 aa12.13□□□□□ -0.47
VPREB3-202ENST00000398465 FAM83EQ2M2I3 478 aa12.13□□□□□ -0.47
VPREB3-202ENST00000398465 KLC3Q6P597 504 aa12.13□□□□□ -0.47
VPREB3-202ENST00000398465 NXPE4Q6UWF7 544 aa12.13□□□□□ -0.47
VPREB3-202ENST00000398465 ISCA2Q86U28 154 aa12.13□□□□□ -0.47
VPREB3-202ENST00000398465 HPS6Q86YV9 775 aa12.13□□□□□ -0.47
VPREB3-202ENST00000398465 CLEC1AQ8NC01 280 aa12.13□□□□□ -0.47
VPREB3-202ENST00000398465 NT5CQ8TCD5 201 aa12.13□□□□□ -0.47
VPREB3-202ENST00000398465 STT3BQ8TCJ2 826 aa12.13□□□□□ -0.47
VPREB3-202ENST00000398465 SLC13A3Q8WWT9 602 aa12.13□□□□□ -0.47
VPREB3-202ENST00000398465 MIEF2Q96C03 454 aa12.13□□□□□ -0.47
VPREB3-202ENST00000398465 MMABQ96EY8 250 aaPredicted RBP12.13□□□□□ -0.47
VPREB3-202ENST00000398465 CRB3Q9BUF7 120 aa12.13□□□□□ -0.47
VPREB3-202ENST00000398465 PITHD1Q9GZP4 211 aaPredicted RBP12.13□□□□□ -0.47
VPREB3-202ENST00000398465 SOX17Q9H6I2 414 aaPredicted RBP12.13□□□□□ -0.47
VPREB3-202ENST00000398465 ALG9Q9H6U8 611 aa12.13□□□□□ -0.47
VPREB3-202ENST00000398465 ANKHQ9HCJ1 492 aa12.13□□□□□ -0.47
VPREB3-202ENST00000398465 MLXIPLQ9NP71 852 aa12.13□□□□□ -0.47
VPREB3-202ENST00000398465 DNAJC11Q9NVH1 559 aa12.13□□□□□ -0.47
VPREB3-202ENST00000398465 P4HTMQ9NXG6 502 aa12.13□□□□□ -0.47
VPREB3-202ENST00000398465 CD274Q9NZQ7 290 aa12.13□□□□□ -0.47
VPREB3-202ENST00000398465 TRPC4Q9UBN4 977 aa12.13□□□□□ -0.47
VPREB3-202ENST00000398465 TP53TG5Q9Y2B4 290 aa12.13□□□□□ -0.47
VPREB3-202ENST00000398465 PCDHGB7Q9Y5F8 929 aa12.13□□□□□ -0.47
VPREB3-202ENST00000398465 HELZ2Q9BYK8 2649 aaKnown RBP12.13□□□□□ -0.47
VPREB3-202ENST00000398465 SCN3AQ9NY46 2000 aa12.13□□□□□ -0.47
VPREB3-202ENST00000398465 A0A0A6YYC8 382 aaPredicted RBP12.12□□□□□ -0.47
VPREB3-202ENST00000398465 EXOC1LA0A1B0GW35 172 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 A0A1W2PQ72 361 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 I3L1I5 382 aaPredicted RBP12.12□□□□□ -0.47
VPREB3-202ENST00000398465 TAPBPO15533 448 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 OR1F1O43749 312 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 KLHL41O60662 606 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 STK16O75716 305 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 KLHL2O95198 593 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 C2P06681 752 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 RHOXF2BP0C7M4 288 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 TNFRSF8P28908 595 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 TYK2P29597 1187 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 PGDP52209 483 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 MEF2AQ02078 507 aaPredicted RBP12.12□□□□□ -0.47
VPREB3-202ENST00000398465 KLC1Q07866 573 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 RGS1Q08116 209 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 DLG1Q12959 904 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 CHAF1BQ13112 559 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 COL9A2Q14055 689 aaPredicted RBP12.12□□□□□ -0.47
VPREB3-202ENST00000398465 HERC3Q15034 1050 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 RBBP7Q16576 425 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 PDK4Q16654 411 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 DCAF10Q5QP82 559 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 ATG9BQ674R7 924 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 ZC3H7AQ8IWR0 971 aaKnown RBP12.12□□□□□ -0.47
VPREB3-202ENST00000398465 AFAP1L2Q8N4X5 818 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 TRPV3Q8NET8 790 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 TTLQ8NG68 377 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 KCTD4Q8WVF5 259 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 EXT2Q93063 718 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 MRRFQ96E11 262 aaKnown RBP12.12□□□□□ -0.47
VPREB3-202ENST00000398465 WDR34Q96EX3 536 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 RHOXF2Q9BQY4 288 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 SLC25A23Q9BV35 468 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 SPNS1Q9H2V7 528 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 FETUBQ9UGM5 382 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 ANAPC2Q9UJX6 822 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 PTBP2Q9UKA9 531 aaKnown RBP12.12□□□□□ -0.47
VPREB3-202ENST00000398465 MRPS2Q9Y399 296 aaKnown RBP12.12□□□□□ -0.47
VPREB3-202ENST00000398465 HEMK1Q9Y5R4 338 aaPredicted RBP12.12□□□□□ -0.47
VPREB3-202ENST00000398465 HS3ST3B1Q9Y662 390 aa12.12□□□□□ -0.47
VPREB3-202ENST00000398465 SPENQ96T58 3664 aaKnown RBP12.12□□□□□ -0.47
VPREB3-202ENST00000398465 SUPT3HB4E1H0 165 aa12.11□□□□□ -0.47
VPREB3-202ENST00000398465 SOCS6O14544 535 aa12.11□□□□□ -0.47
VPREB3-202ENST00000398465 RIPK2O43353 540 aa12.11□□□□□ -0.47
VPREB3-202ENST00000398465 LCMT2O60294 686 aaKnown RBP12.11□□□□□ -0.47
VPREB3-202ENST00000398465 SUPT3HO75486 399 aa12.11□□□□□ -0.47
VPREB3-202ENST00000398465 ATXN8OSP0DMR3 200 aa12.11□□□□□ -0.47
VPREB3-202ENST00000398465 C1GALT1C1LP0DN25 315 aa12.11□□□□□ -0.47
VPREB3-202ENST00000398465 IL1RNP18510 177 aa12.11□□□□□ -0.47
VPREB3-202ENST00000398465 GDF5P43026 501 aa12.11□□□□□ -0.47
VPREB3-202ENST00000398465 MSH2P43246 934 aa12.11□□□□□ -0.47
VPREB3-202ENST00000398465 HSPA7P48741 367 aa12.11□□□□□ -0.47
VPREB3-202ENST00000398465 SOX8P57073 446 aa12.11□□□□□ -0.47
VPREB3-202ENST00000398465 FOXL2P58012 376 aa12.11□□□□□ -0.47
VPREB3-202ENST00000398465 IRF9Q00978 393 aa12.11□□□□□ -0.47
VPREB3-202ENST00000398465 E2F2Q14209 437 aa12.11□□□□□ -0.47
VPREB3-202ENST00000398465 ACAP2Q15057 778 aa12.11□□□□□ -0.47
VPREB3-202ENST00000398465 TUBB8Q3ZCM7 444 aa12.11□□□□□ -0.47
VPREB3-202ENST00000398465 SLCO4C1Q6ZQN7 724 aa12.11□□□□□ -0.47
VPREB3-202ENST00000398465 ABHD13Q7L211 337 aa12.11□□□□□ -0.47
VPREB3-202ENST00000398465 ZNF605Q86T29 641 aa12.11□□□□□ -0.47
VPREB3-202ENST00000398465 KRT78Q8N1N4 520 aa12.11□□□□□ -0.47
VPREB3-202ENST00000398465 KCT2Q8NC54 265 aa12.11□□□□□ -0.47
VPREB3-202ENST00000398465 OR9A4Q8NGU2 314 aa12.11□□□□□ -0.47
VPREB3-202ENST00000398465 ZCCHC10Q8TBK6 192 aa12.11□□□□□ -0.47
VPREB3-202ENST00000398465 DCAKDQ8WVC6 231 aa12.11□□□□□ -0.47
VPREB3-202ENST00000398465 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.11□□□□□ -0.47
VPREB3-202ENST00000398465 EFCAB11Q9BUY7 163 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms