RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 OR2T5Q6IEZ7 315 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 CAPN13Q6MZZ7 669 aaPredicted RBP4.77□□□□□ -1.65
SMAD4-202ENST00000398417 OR2T29Q8NH02 315 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 ZFP90Q8TF47 636 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 TAMM41Q96BW9 452 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 EID2BQ96D98 161 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 ITPAQ9BY32 194 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 LINC00597Q9H2U6 94 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 THUMPD1Q9NXG2 353 aaKnown RBP4.77□□□□□ -1.65
SMAD4-202ENST00000398417 TVP23BQ9NYZ1 205 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 VPS29Q9UBQ0 182 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 ANGPT4Q9Y264 503 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 MED16Q9Y2X0 877 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 SH3GLB1Q9Y371 365 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 AKAP11Q9UKA4 1901 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 DOCK2Q92608 1830 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 DOCK10Q96BY6 2186 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 DYSFO75923 2080 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 ARPC4-TTLL3A0A0A6YYG9 625 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 RAB19A4D1S5 217 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 ANKDD1BA6NHY2 528 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 CLDN25C9JDP6 229 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 TSPAN6O43657 245 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 CCNB2O95067 398 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 GADD45GO95257 159 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 IGLV3-27P01718 113 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 GTF2E2P29084 291 aaKnown RBP4.77□□□□□ -1.65
SMAD4-202ENST00000398417 DGKGP49619 791 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 CLDN8P56748 225 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 NCS1P62166 190 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 SLC14A1Q13336 389 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 AQP6Q13520 282 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 TP53BP2Q13625 1128 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 CCSMST1Q4G0I0 132 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 FAM180BQ6P0A1 224 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 NEK5Q6P3R8 708 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 PTCHD4Q6ZW05 846 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 SLC22A16Q86VW1 577 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 RPL3LQ92901 407 aaKnown RBP4.77□□□□□ -1.65
SMAD4-202ENST00000398417 CLP1Q92989 425 aaKnown RBP4.77□□□□□ -1.65
SMAD4-202ENST00000398417 SLC12A9Q9BXP2 914 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 ACPTQ9BZG2 426 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 EHD3Q9NZN3 535 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 BACE2Q9Y5Z0 518 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 PCM1Q15154 2024 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 RGPD3A6NKT7 1758 aaPredicted RBP4.77□□□□□ -1.65
SMAD4-202ENST00000398417 RGPD4Q7Z3J3 1758 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 FAM155AB1AL88 458 aaPredicted RBP4.77□□□□□ -1.65
SMAD4-202ENST00000398417 FZD6O60353 706 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 LCKP06239 509 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 HPCAL1P37235 193 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 TMBIM6P55061 237 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 ALDH6A1Q02252 535 aaKnown RBP4.77□□□□□ -1.65
SMAD4-202ENST00000398417 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.77□□□□□ -1.65
SMAD4-202ENST00000398417 BEND4Q6ZU67 534 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 CCDC103Q8IW40 242 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 SLC5A8Q8N695 610 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 CXorf40AQ8TE69 158 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 RAB2BQ8WUD1 216 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 FATE1Q969F0 183 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 MYDGFQ969H8 173 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 EXOSC8Q96B26 276 aaKnown RBP4.77□□□□□ -1.65
SMAD4-202ENST00000398417 HTATIP2Q9BUP3 242 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 SEPSECSQ9HD40 501 aaKnown RBP4.77□□□□□ -1.65
SMAD4-202ENST00000398417 CCNB1IP1Q9NPC3 277 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 C11orf16Q9NQ32 467 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 ASAH2Q9NR71 780 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 ING4Q9UNL4 249 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 C14orf166Q9Y224 244 aaKnown RBP4.77□□□□□ -1.65
SMAD4-202ENST00000398417 H3BM21 787 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 AIREO43918 545 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 FUCA1P04066 466 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 PRPS1L1P21108 318 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 CDH3P22223 829 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 PIGAP37287 484 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 RPP38P78345 283 aaKnown RBP4.76□□□□□ -1.65
SMAD4-202ENST00000398417 DNASE1L3Q13609 305 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 TCEA2Q15560 299 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 DPP10Q8N608 796 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 OR9Q1Q8NGQ5 310 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 CAPSLQ8WWF8 208 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 LRRC46Q96FV0 321 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 PDLIM5Q96HC4 596 aaKnown RBP4.76□□□□□ -1.65
SMAD4-202ENST00000398417 PKP4Q99569 1192 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 CLMPQ9H6B4 373 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 CWH43Q9H720 699 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 HMG20AQ9NP66 347 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 SLC6A13Q9NSD5 602 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 INTS6Q9UL03 887 aaKnown RBP4.76□□□□□ -1.65
SMAD4-202ENST00000398417 ASF1AQ9Y294 204 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 FUOMA2VDF0 154 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 PCP4L1A6NKN8 68 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 J3KTA2 159 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 COQ9O75208 318 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 ERAL1O75616 437 aaKnown RBP4.76□□□□□ -1.65
SMAD4-202ENST00000398417 CCNDBP1O95273 360 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 NPPAP01160 153 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 ACPPP15309 386 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 TNNI3P19429 210 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 CTSKP43235 329 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms